Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4327638   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 osa-r.5   4327638   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 osa-m.8   4327638   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 ath-u.4   AT1G66345   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.4   100789449   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 ppo-u.4   7493541   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 
 mtr-u.4   25482808   pentatricopeptide repeat-containing protein At1g66345, mitochondrial 

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Top 50 coexpressed genes to 4327638 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa785   Lipoic acid metabolism  1 5 -
 osa590   Arachidonic acid metabolism  1 11 -
 osa380   Tryptophan metabolism  1 60 -
 osa3013   Nucleocytoplasmic transport  2 109 -
 osa190   Oxidative phosphorylation  1 156 -

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osa:LOC4327638 (pentatricopeptide repeat-containing protein At1g66345, mitochondrial) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4327638
osa-r.5
for
4327638
osa-m.8
for
4327638
ath-u.4
for
AT1G66345
gma-u.4
for
100789449
ppo-u.4
for
7493541
mtr-u.4
for
25482808
1 LOC4343078 pentatricopeptide repeat-containing protein At3g46790, chloroplastic 4343078 Os07g0436700 3.5 3.8
 3.3
-0.0
0.9
2 LOC4330741 tRNA (carboxymethyluridine(34)-5-O)-methyltransferase 4330741 Os02g0750500 3.5 4.8
 2.1
 1.6
 0.4
-0.3
 -0.0
 1.1
3 LOC4341464 DNA-directed RNA polymerase III subunit RPC6 4341464 Os06g0603400 3.5 2.9
 4.0
1.2
-0.4
 0.6
 2.6
0.1
4 LOC4344035 pentatricopeptide repeat-containing protein At5g48910 4344035 Os07g0636900 3.4 1.9
 5.0



5 LOC4327605 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 4327605 Os01g0819800 3.4 2.5
 4.3
 2.6
 2.4
1.6
6 LOC4337368 pentatricopeptide repeat-containing protein At3g50420 4337368 Os04g0672700 3.3 4.7
3.5

-0.9
7 LOC4348076 uncharacterized LOC4348076 4348076 Os10g0139500 3.3 2.5
 4.0



8 LOC4326712 protein WHAT'S THIS FACTOR 1 homolog 4326712 Os01g0293200 3.2 3.4
 2.9
 1.7
 0.7
 0.2
0.2
 2.2
0.2
9 LOC4339555 uncharacterized LOC4339555 4339555 Os05g0554500 3.1 3.9
 2.3
 1.1
 1.3
0.3
 0.9
 2.1
10 LOC4328959 pentatricopeptide repeat-containing protein At3g16010 4328959 Os02g0266200 2.9 3.2
 2.7
 2.6
 0.2
 0.9
 1.3
11 LOC4350187 disease resistance protein RGA2 4350187 Os11g0245800 2.9 2.7
 3.1



12 LOC4352692 octanoyltransferase LIP2p, chloroplastic 4352692 Os12g0596000 2.9 1.7
 4.0
 1.2
 0.1
-0.1
 1.1
 0.7
13 LOC9268954 pentatricopeptide repeat-containing protein At5g64320, mitochondrial 9268954 Os10g0368902 2.9 3.8
 2.0



14 LOC4326939 (+)-neomenthol dehydrogenase 4326939 Os01g0929500 2.9 2.5
 3.2
 -0.9
 -1.3
 2.0
 3.0
15 LOC4347560 U11/U12 small nuclear ribonucleoprotein 35 kDa protein 4347560 Os09g0513700 2.9 2.9
 2.8
 -0.7
 0.3
-0.3
 -0.2
 0.5
16 LOC4347068 pentatricopeptide repeat-containing protein At5g61400 4347068 Os09g0417500 2.9 1.7
 4.0
 2.5

2.4
17 LOC4331780 nuclear pore complex protein NUP96 4331780 Os03g0172000 2.8 3.7
 2.0
 -0.7
 0.7
 0.6
 0.9
18 LOC4331630 nephrocystin-3 4331630 Os03g0149400 2.8 4.7
 1.0



19 LOC4336945 uncharacterized LOC4336945 4336945 Os04g0610200 2.8 3.3
 2.3



20 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 2.8 2.9
 2.7
-0.1
0.2
21 LOC4346616 mediator of RNA polymerase II transcription subunit 14 4346616 Os09g0281900 2.8 3.0
 2.6
 -0.8
 2.0
1.7
 1.0
0.8
 1.2
22 LOC4324863 pentatricopeptide repeat-containing protein At2g36240 4324863 Os01g0908800 2.8 2.1
 3.5
 3.2
 5.0
 0.5
 3.8
23 LOC4350640 uncharacterized LOC4350640 4350640 Os11g0532000 2.8 2.3
 3.3



24 LOC4333188 pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like 4333188 Os03g0435200 2.8 2.7
 2.8
0.7
-0.0
1.3
25 LOC4330282 uncharacterized LOC4330282 4330282 Os02g0672400 2.7 2.7
 2.8
 -0.8
 1.3
 0.9
 0.1
26 LOC4335469 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 4335469 Os04g0319600 2.7 2.3
 3.2
 0.7
 -0.1
-1.7
 -0.2
-0.9
 0.4
27 LOC4345662 uncharacterized LOC4345662 4345662 Os08g0435800 2.7 2.0
 3.4
 2.3
 0.3
 0.5
 0.8
28 LOC4351499 DEAD-box ATP-dependent RNA helicase 52B-like 4351499 Os12g0147500 2.7 3.2
 2.3
 -0.6
 1.1
 0.6
 1.8
29 LOC4341020 pentatricopeptide repeat-containing protein At2g03880, mitochondrial 4341020 Os06g0472300 2.7 3.0
 2.4
-0.0
1.2
30 LOC4337182 pentatricopeptide repeat-containing protein At1g80550, mitochondrial 4337182 Os04g0643700 2.7 1.5
 3.8
 2.9
 1.9
1.0
 1.1
 1.3
31 LOC107279536 uncharacterized LOC107279536 107279536 2.7 3.6




32 LOC4331709 probable indole-3-pyruvate monooxygenase YUCCA7 4331709 Os03g0162000 2.7 2.7
 2.6



33 LOC4328315 putative leucine-rich repeat receptor-like protein kinase At2g19210 4328315 Os02g0151100 2.7 2.2
 3.1
 0.2
0.2
 0.7
0.1
 -0.2
-0.4
 0.4
0.1
34 LOC4348867 heterogeneous nuclear ribonucleoprotein 1 4348867 Os10g0470900 2.6 3.3
 2.0
 0.2
-0.7
 2.9
2.3
 1.0
0.7
 2.0
35 LOC4340839 uncharacterized CRM domain-containing protein At3g25440, chloroplastic 4340839 Os06g0304500 2.6 3.0
 2.3
 2.9
 -0.2
-0.8
 1.3
0.4
 0.1
36 LOC4351215 serine/arginine-rich SC35-like splicing factor SCL30A 4351215 Os11g0704700 2.6 3.0
 2.2



37 LOC4325314 pentatricopeptide repeat-containing protein At3g54980, mitochondrial 4325314 Os01g0611900 2.6 1.7
 3.5



38 LOC4334879 pentatricopeptide repeat-containing protein At5g52850, chloroplastic 4334879 Os03g0861900 2.6 1.5
 3.7
 3.5
 -1.0
1.2
39 LOC4336321 uncharacterized LOC4336321 4336321 2.6 2.2
 3.0



40 LOC4333489 pentatricopeptide repeat-containing protein At5g66500, mitochondrial 4333489 Os03g0624800 2.6 2.7
 2.5
 3.2
 1.9
1.8
1.8
41 LOC4332902 pentatricopeptide repeat-containing protein At5g18950 4332902 Os03g0363700 2.6 3.7




42 LOC4345682 poly(A)-specific ribonuclease PARN-like 4345682 Os08g0440200 2.6 2.7
 2.4
 -1.0
 1.4
 0.9
0.6
 1.3
43 LOC4331214 DEAD-box ATP-dependent RNA helicase 48-like 4331214 OSNPB_020826100 2.5 3.0
 2.1
 0.9
 2.6
0.9
 0.4
-0.1
 1.5
44 LOC4331862 pentatricopeptide repeat-containing protein DOT4, chloroplastic 4331862 Os03g0185300 2.5 2.9
 2.2
0.5

45 LOC4342835 pentatricopeptide repeat-containing protein At3g06920 4342835 Os07g0249100 2.5 3.4
 1.6
 0.9
 1.8
 1.6
 0.6
46 LOC4336205 elongator complex protein 3-like 4336205 OSNPB_040484900 2.5 2.5
 2.5
 -1.5
 2.0
1.7
 0.9
 0.9
47 LOC4352026 WD repeat-containing protein GTS1 4352026 Os12g0294100 2.5 2.8
 2.3
 -1.0
 0.5
0.1
 1.1
-0.5
 0.3
48 LOC4340312 ATPase 6, plasma membrane-type 4340312 Os06g0181500 2.5 3.8
1.3
-0.1
 1.0
0.9
 0.1
-0.0
 0.4
0.1
49 LOC4324467 coiled-coil domain-containing protein R3HCC1L 4324467 Os01g0965600 2.5 3.0
 2.0
 -1.4
 2.0
1.5
 -0.3
 0.4
50 LOC4346861 THO complex subunit 6 4346861 Os09g0363600 2.5 2.5
 2.5
 -0.9
 1.3
0.6
 -0.7
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