Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4325366   putative pentatricopeptide repeat-containing protein At5g52630 
 osa-r.5   4325366   putative pentatricopeptide repeat-containing protein At5g52630 
 osa-m.8   4325366   putative pentatricopeptide repeat-containing protein At5g52630 
 ath-u.4   MEF1   mitochondrial RNAediting factor 1 
 gma-u.4   100800235   putative pentatricopeptide repeat-containing protein At5g52630 
 sly-u.4   101247893   putative pentatricopeptide repeat-containing protein At5g52630 
 ppo-u.4   7484008   putative pentatricopeptide repeat-containing protein At5g52630 
 mtr-u.4   11437918   putative pentatricopeptide repeat-containing protein At5g52630 

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Top 50 coexpressed genes to 4325366 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa240   Pyrimidine metabolism  2 62 2.12
 osa380   Tryptophan metabolism  1 60 -
 osa1232   Nucleotide metabolism  2 80 -
 osa230   Purine metabolism  1 91 -
 osa480   Glutathione metabolism  1 114 -

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osa:LOC4325366 (putative pentatricopeptide repeat-containing protein At5g52630) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4325366
osa-r.5
for
4325366
osa-m.8
for
4325366
ath-u.4
for
MEF1
gma-u.4
for
100800235
sly-u.4
for
101247893
ppo-u.4
for
7484008
mtr-u.4
for
11437918
1 LOC4333891 zinc finger protein VAR3, chloroplastic 4333891 Os03g0712200 5.0 4.7
 5.3
2.8
 1.2
 2.8
 2.5
2 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 4.2 6.0
 2.5
4.4
 5.5
2.7
3 LOC4350793 pentatricopeptide repeat-containing protein At4g14850 4350793 Os11g0583300 4.0 5.5
 2.5
 4.3
 6.6
 3.7
4.9
3.6
4 LOC4342470 pentatricopeptide repeat-containing protein At3g62890 4342470 Os07g0163900 3.5 6.0




3.0
5 LOC9269859 uncharacterized LOC9269859 9269859 3.5 5.7





6 LOC4345759 uncharacterized LOC4345759 4345759 Os08g0459100 3.4 4.2
 2.7
 0.4
 1.9
0.7
 -0.3
 2.9
0.6
 2.9
-0.9
7 LOC4340258 ribonucleoside-diphosphate reductase large subunit 4340258 Os06g0168600 3.4 3.9
 2.9
 -0.4
 2.2
1.1
 1.3
0.1
 1.2
0.8
 1.9
1.2
8 LOC4324323 glycine-rich RNA-binding protein 4, mitochondrial 4324323 Os01g0913400 3.4 5.6
3.0
 1.1
 1.2
1.1
9 LOC4341512 pentatricopeptide repeat-containing protein At1g03540 4341512 Os06g0611200 3.4 5.1
2.5
 7.9
 4.2
5.1
10 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 3.3 4.0
 2.7




11 LOC4338264 putative pentatricopeptide repeat-containing protein At1g10330 4338264 Os05g0271900 3.3 4.2
 2.5
 2.1
 3.8
 0.2

12 LOC4327814 pentatricopeptide repeat-containing protein At3g16610 4327814 Os01g0977400 3.3 4.1
 2.5
4.0
2.1
 2.2
13 LOC4340839 uncharacterized CRM domain-containing protein At3g25440, chloroplastic 4340839 Os06g0304500 3.3 3.7
 2.9
 2.3
 0.7
0.3
 0.0
 0.3
-0.0
 -1.1
14 LOC4328700 receptor kinase-like protein Xa21 4328700 Os02g0210700 3.2 4.8
0.5
0.3
 0.2
-0.2
 0.4
-0.1
 0.3
-0.7
 0.9
0.8
15 LOC4349873 uncharacterized LOC4349873 4349873 Os11g0167300 3.2 4.6
 1.8
 2.6
0.4
 3.0
2.5
 2.1
 2.3
2.0
 4.5
16 LOC4338983 pentatricopeptide repeat-containing protein At2g27610 4338983 Os05g0455900 3.2 3.2
 3.2
 5.2
 3.0
 5.0

17 LOC4351284 putative pentatricopeptide repeat-containing protein At3g08820 4351284 Os12g0109300 3.1 3.7
 2.5
 3.7
 8.0
 3.3
 3.5
2.7
 4.7
18 LOC4325438 pentatricopeptide repeat-containing protein At2g33680 4325438 Os01g0374200 3.1 4.6
3.9
 6.9
 4.8
 2.4
 5.7
19 LOC4324863 pentatricopeptide repeat-containing protein At2g36240 4324863 Os01g0908800 3.1 4.8
 1.3
 3.1
 2.2
 -0.2
 0.4
 2.3
20 LOC9270198 putative pentatricopeptide repeat-containing protein At3g15200 9270198 Os01g0151900 3.0 4.9
1.7
1.7
 2.1
 1.4
0.2
21 LOC9267687 pentatricopeptide repeat-containing protein At5g43790 9267687 Os12g0128200 3.0 3.3
 2.7
 2.8
4.7
2.7
22 LOC4339275 single-stranded DNA-binding protein, mitochondrial 4339275 Os05g0509700 2.9 3.8
 2.0
 1.2
 1.2
0.5
 2.1
 2.7
 3.9
23 LOC4335906 protein disulfide isomerase-like 1-2 4335906 OSNPB_040436300 2.9 2.7
 3.1
 -0.3
-0.4
 -0.5
-0.9
 1.6
1.3
 -0.4
 0.7
24 LOC4345374 uncharacterized LOC4345374 4345374 Os08g0360000 2.9 4.0
 1.7
 4.2
 0.9
 1.3
 0.4
 1.2
25 LOC107276304 uncharacterized LOC107276304 107276304 Os09g0547900 2.9 4.1





26 LOC4334787 putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 4334787 Os03g0849700 2.8 2.6
 3.1
5.8
 1.9
 4.0
 2.0
27 LOC4345420 putative pentatricopeptide repeat-containing protein At3g25970 4345420 Os08g0375800 2.8 3.5
 2.2
 4.3
 4.0
 3.5

28 LOC4329654 pentatricopeptide repeat-containing protein At2g13600 4329654 Os02g0555100 2.8 4.7

4.8

3.9
29 LOC4332647 pentatricopeptide repeat-containing protein At1g05750, chloroplastic 4332647 Os03g0314400 2.8 3.7
 1.9
6.3
 3.1
 2.8
 4.0
30 LOC4329793 pentatricopeptide repeat-containing protein At5g65560 4329793 Os02g0582300 2.8 2.6
 2.9




31 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 2.8 3.5
 2.0
6.6
5.0
 3.6

32 LOC4349063 pentatricopeptide repeat-containing protein At3g60050 4349063 Os10g0506000 2.8 4.4
2.2
1.6
 2.2
2.0
 0.2
 1.7
 3.1
1.9
33 LOC4347727 WD-40 repeat-containing protein MSI3 4347727 Os09g0540600 2.8 2.0
 3.6
 3.7
2.0
 6.4
5.2
 2.2
1.3
 2.0
1.7
 3.4
2.4
34 LOC9272142 uncharacterized LOC9272142 9272142 Os07g0191600 2.7 4.3
-0.5
-1.1
 1.5
0.9
 1.0
0.8
 -0.8
-1.0
 -0.8
-0.9
35 LOC4333679 deoxyuridine 5'-triphosphate nucleotidohydrolase-like 4333679 Os03g0669100 2.7 2.6
 2.8
 -0.9
 2.0
1.9
 0.4
0.3
 -0.1
 0.4
36 LOC4331821 tubulin--tyrosine ligase-like protein 12 4331821 Os03g0179000 2.7 2.5
 2.9
 0.8
 1.1
 2.0
 1.6
 3.3
37 LOC4337840 pentatricopeptide repeat-containing protein At2g13600 4337840 Os05g0153400 2.7 3.1
 2.3




38 LOC4344353 pentatricopeptide repeat-containing protein At1g13040, mitochondrial 4344353 Os07g0688100 2.7 2.8
 2.6
 2.8
 6.5
 1.4
 4.5
 3.2
39 LOC4343937 pentatricopeptide repeat-containing protein At4g28010 4343937 Os07g0621100 2.7 4.5





40 LOC4324326 pentatricopeptide repeat-containing protein At1g05600 4324326 Os01g0913800 2.7 4.2
 1.2
 3.6
 0.9
 0.3
 2.3
 -0.2
-0.3
41 LOC9266213 transcription factor MYB8 9266213 Os05g0429900 2.7 1.6
 3.8
 0.6
0.3
 0.8
0.5
 -0.0
-0.7
 0.9
0.7
 -0.6
-0.8
42 LOC4325920 pentatricopeptide repeat-containing protein At3g22690 4325920 Os01g0646000 2.7 4.5
4.5
 1.7
0.0
 3.4
1.0
43 LOC4346364 probable transcription factor At2g01370 4346364 Os09g0100800 2.7 3.5
 1.8




44 LOC4332013 putative pentatricopeptide repeat-containing protein At1g02420 4332013 Os03g0208600 2.6 3.2
 2.0
5.5
 0.1
 1.2
 4.5
45 LOC4327956 pentatricopeptide repeat-containing protein At1g33350 4327956 Os01g0800400 2.6 2.3
 2.9



2.2
46 LOC4333574 GTPase LSG1-2 4333574 Os03g0647500 2.6 3.1
 2.1
 2.6
0.5
 3.4
2.2
 1.3
 0.2
 0.8
47 LOC4331709 probable indole-3-pyruvate monooxygenase YUCCA7 4331709 Os03g0162000 2.6 4.3
 0.9




48 LOC4327456 protein NETWORKED 2A 4327456 Os01g0835800 2.6 1.5
 3.7
 -0.4
 -0.3
-0.4
 1.1
-0.6
 -0.4
-1.6
 -0.4
49 LOC4339048 protein NETWORKED 2A 4339048 Os05g0466200 2.6 1.9
 3.3
 -0.4
 -0.3
-0.4
 1.1
-0.6
 -0.4
-1.6
 -0.4
50 LOC9267207 pentatricopeptide repeat-containing protein At5g15010, mitochondrial 9267207 Os01g0816000 2.6 4.1
4.1
 4.1
 1.2
 2.4
1.6
 2.5
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