Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4325517   proline-rich receptor-like protein kinase PERK8 
 osa-r.5   4325517   proline-rich receptor-like protein kinase PERK8 
 osa-m.8   4325517   proline-rich receptor-like protein kinase PERK8 
 ath-u.4   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 gma-u.4   100811126   uncharacterized LOC100811126 
 gma-u.4   100804209   uncharacterized LOC100804209 
 sly-u.4   104648556   uncharacterized LOC104648556 
 ppo-u.4   7470927   uncharacterized LOC7470927 
 mtr-u.4   11426355   uncharacterized LOC11426355 

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Top 50 coexpressed genes to 4325517 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa195   Photosynthesis  3 76 3.26
 osa860   Porphyrin metabolism  2 42 2.45
 osa3015   mRNA surveillance pathway  1 115 -
 osa1240   Biosynthesis of cofactors  1 248 -
 osa3010   Ribosome  3 353 -

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osa:LOC4325517 (proline-rich receptor-like protein kinase PERK8) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4325517
osa-r.5
for
4325517
osa-m.8
for
4325517
ath-u.4
for
CRR41
gma-u.4
for
100811126
gma-u.4
for
100804209
sly-u.4
for
104648556
ppo-u.4
for
7470927
mtr-u.4
for
11426355
1 LOC4334106 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 4334106 Os03g0748300 6.7 5.3
 8.2
 3.8
 3.2
 4.3
 1.2
 5.0
 6.8
2 LOC4331681 photosynthetic NDH subunit of subcomplex B 2, chloroplastic 4331681 Os03g0158300 6.5 3.2
 9.8
 3.2
 2.4
0.8
 1.6
0.4
 1.9
 2.7
 4.1
3 LOC4342192 photosynthetic NDH subunit of lumenal location 3, chloroplastic 4342192 Os07g0105600 6.0 4.8
 7.2
 3.5
 2.6
2.3
 2.6
2.5
 2.0
 2.2
 2.6
4 LOC4344632 multiple organellar RNA editing factor 9, chloroplastic 4344632 Os08g0139100 5.5 5.2
 5.7
 5.0
0.5
 2.0
1.9
 3.6
2.3
 4.7
 3.2
0.9
 3.1
-1.1
5 LOC4342438 RNA-binding protein CP33, chloroplastic 4342438 Os07g0158300 5.1 4.2
 6.0
 5.8
 2.4
1.9
 3.2
2.6
 2.7
 3.3
3.0
 3.5
2.5
6 LOC4334836 pentatricopeptide repeat-containing protein At5g46580, chloroplastic 4334836 Os03g0856100 4.9 4.5
 5.3
 7.2
 3.3
1.9
 5.5
4.3
 3.1
 1.8
 3.4
7 LOC4343262 photosynthetic NDH subunit of subcomplex B 3, chloroplastic 4343262 Os07g0489800 4.9 3.8
 5.9
 2.3
 2.6
2.2
 4.4
2.5
 0.8
 0.5
 4.2
8 LOC4345779 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like 4345779 Os08g0463900 4.8 2.1
 7.5
 2.2
 -1.4
 -0.3
 2.5
 0.9
 2.1
9 LOC4329586 ribonuclease J 4329586 Os02g0539600 4.8 4.0
 5.6
 2.4
 2.4
2.3
 3.1
2.2
 2.3
 3.7
3.2
 3.0
0.5
10 LOC4334387 probable zinc metalloprotease EGY1, chloroplastic 4334387 OSNPB_030792400 4.8 3.3
 6.2
 5.2
 3.2
1.9
 2.1
1.7
 3.5
 0.7
 1.3
11 LOC4346294 28 kDa ribonucleoprotein, chloroplastic 4346294 Os08g0557100 4.5 3.7
 5.3
 5.7
2.0
 2.7
1.9
 4.8
4.3
 4.3
 3.5
2.8
 3.2
1.5
12 LOC4339230 uncharacterized LOC4339230 4339230 Os05g0500400 4.5 2.8
 6.2
 2.3
 2.5
2.0
 4.0
3.6
 2.2
 1.0
 3.6
13 LOC4344522 28 kDa ribonucleoprotein, chloroplastic 4344522 Os08g0117100 4.5 3.0
 6.0
 6.0
 1.2
1.1
 1.8
1.3
1.9
14 LOC4337691 uncharacterized LOC4337691 4337691 Os05g0128100 4.5 5.0
 3.9
 1.6
 3.8
2.3
 2.1
1.4
1.9
 4.6
15 LOC4344001 29 kDa ribonucleoprotein A, chloroplastic 4344001 Os07g0631900 4.5 4.3
 4.6
 1.9
1.6
 1.9
1.8
 3.1
2.3
 3.5
3.1
 3.9
2.9
 3.8
16 LOC4330883 uncharacterized LOC4330883 4330883 Os02g0773500 4.4 3.4
 5.3





17 LOC4339629 uncharacterized LOC4339629 4339629 Os05g0565500 4.1 3.3
 5.0
2.2
1.5
 2.3
0.3
 1.4
 4.0
 3.2
18 LOC4348745 rubisco accumulation factor 1, chloroplastic-like 4348745 OSNPB_100445600 4.1 4.2
 4.0
 4.8
3.8
 2.8
 4.8
 3.8
 4.0
 3.1
19 LOC4329953 protein TAB2 homolog, chloroplastic-like 4329953 Os02g0610800 4.1 2.2
 6.0
 2.3
 3.0
2.8
 4.1
3.7
 3.7
 1.9
1.3
 2.9
2.2
20 LOC4342069 uncharacterized LOC4342069 4342069 Os06g0715200 4.1 5.4
 2.7
2.8
1.9
 4.2
2.2
 3.6
 0.8
 5.0
21 LOC4337577 uncharacterized LOC4337577 4337577 Os05g0108000 4.0 3.7
 4.3
 4.2
 1.6
 2.4
 3.7
 0.9
 2.2
22 LOC4338537 ferrochelatase-2, chloroplastic-like 4338537 OSNPB_050361200 4.0 3.8
 4.2
 1.7
 2.4
2.4
 3.2
3.1
 0.1
 1.3
0.5
 0.8
0.5
23 LOC4336948 methionine aminopeptidase 1B, chloroplastic 4336948 Os04g0610500 4.0 2.8
 5.2
 2.3
 2.0
1.6
 2.5
2.0
 2.3
 1.5
 3.7
24 LOC4336185 uncharacterized LOC4336185 4336185 Os04g0481300 3.9 2.5
 5.3
 2.8
 2.4
 3.2
 2.6
 1.7
 3.1
25 LOC4331339 DEAD-box ATP-dependent RNA helicase 50-like 4331339 OSNPB_030108600 3.9 2.6
 5.2
 3.1
 2.1
1.0
 1.5
1.3
 2.7
 1.4
 1.2
26 LOC4333342 uncharacterized LOC4333342 4333342 Os03g0586500 3.9 4.5
 3.2
 1.4
 1.3
1.1
 1.8
1.3
 1.8
 3.2
 3.5
27 LOC4345611 chaperonin-like RBCX protein 1, chloroplastic 4345611 Os08g0425200 3.8 2.5
 5.2
 -0.1
 2.4
0.7
 0.6
-0.4
 2.7
 3.2
 2.8
28 LOC9270240 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 9270240 Os06g0114366 3.8 3.3
 4.3





29 LOC4350679 uncharacterized protein At3g49140 4350679 Os11g0544000 3.7 2.2
 5.2
 2.9
2.2
 1.3
1.2
 2.1
0.4
 4.3
1.6
 1.2
0.4
 3.0
30 LOC4342622 pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 4342622 Os07g0191500 3.7 2.3
 5.1
 2.0
 2.7
 1.5
 2.5
 2.2
 1.9
31 LOC4338807 thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic 4338807 Os05g0417200 3.7 2.6
 4.7
 4.6
 1.9
 2.5
 1.9
 2.5
 2.4
32 LOC4348816 tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 4348816 Os10g0461100 3.7 2.8
 4.5
 3.4
 2.2
1.1
 2.8
1.9
 4.8
 1.1
1.0
 1.5
33 LOC4332353 uncharacterized LOC4332353 4332353 Os03g0265900 3.7 3.9
 3.4
 1.4
 1.4
0.1
 1.5
1.1
 1.0
-0.7
 4.0
-0.7
 3.5
-0.9
34 LOC4347448 protein Iojap, chloroplastic 4347448 Os09g0493600 3.7 3.4
 3.9
 5.7
 2.7
1.8
 3.1
1.9
 4.2
 1.8
1.4
 1.6
35 LOC4352412 uncharacterized LOC4352412 4352412 Os12g0534100 3.6 2.4
 4.9
 3.8
 1.4
 0.0
 1.5
 0.8
 0.6
36 LOC4332466 50S ribosomal protein L10, chloroplastic 4332466 Os03g0284400 3.6 2.7
 4.6
 3.7
 2.4
 2.0
 4.4
 2.9
0.6
 2.4
37 LOC4332843 divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic 4332843 OSNPB_030351200 3.6 2.3
 4.8
 5.4
 -0.0
-0.3
 1.7
-0.4
 2.0
 0.1
 2.4
38 LOC4326517 uncharacterized LOC4326517 4326517 Os01g0940600 3.6 3.8
 3.4
 1.0
 3.9
 4.5
 3.5
 2.7
 2.9
39 LOC4325168 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic 4325168 Os01g0271400 3.6 2.1
 5.0
 0.3
 1.1
0.8
 1.3
1.0
 1.1
 0.9
 0.4
40 LOC4337512 uncharacterized LOC4337512 4337512 Os04g0692200 3.6 2.4
 4.8
 1.7
 2.4
2.4
 2.8
1.7
 3.4
 1.1
 1.8
0.5
41 LOC4328685 plastidic ATP/ADP-transporter 4328685 Os02g0208100 3.6 3.8
 3.3
 0.0
-0.0
 1.0
-0.1
 1.3
0.7
 2.6
2.2
 1.7
 1.2
-0.3
42 LOC4345248 uncharacterized LOC4345248 4345248 Os08g0318400 3.5 3.3
 3.7





43 LOC4336393 protein disulfide isomerase pTAC5, chloroplastic 4336393 Os04g0514400 3.5 3.3
 3.7
 1.5
 2.1
1.0
 2.5
1.4
 3.4
 2.5
 2.9
44 LOC4332348 50S ribosomal protein L4, chloroplastic 4332348 Os03g0265400 3.5 2.7
 4.2
 1.8
 2.4
2.4
 2.9
2.3
 4.4
 1.6
 1.6
45 LOC4333624 ferredoxin C 1, chloroplastic 4333624 Os03g0659200 3.5 2.6
 4.4
3.1
2.8
 4.6
1.4
 1.3
 1.2
0.0
 3.0
46 LOC4326610 psbP domain-containing protein 5, chloroplastic 4326610 Os01g0617900 3.5 2.7
 4.3
 3.4
 2.4
2.2
 2.3
2.0
 3.4
 1.3
 3.9
47 LOC4328296 protein CHLOROPLAST IMPORT APPARATUS 2 4328296 Os02g0148000 3.5 4.5
 2.5
 3.9
1.8
 1.3
0.8
 2.4
2.1
 3.0
 1.9
0.8
 2.6
-0.4
48 LOC4346605 30S ribosomal protein 2, chloroplastic 4346605 Os09g0279500 3.4 2.3
 4.5
 5.2
 2.6
2.1
 2.8
1.7
2.8
 3.9
49 LOC4334749 30S ribosomal protein S6 alpha, chloroplastic 4334749 Os03g0843400 3.4 2.7
 4.1
 3.4
 2.8
1.7
 3.7
3.5
 5.2
 1.6
 1.7
50 LOC4326942 uncharacterized LOC4326942 4326942 Os01g0930000 3.4 1.9
 4.8
 2.5
 2.1
 2.0
 2.2
 -0.3
 0.4
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