Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4325497   protein CROWDED NUCLEI 4 
 osa-r.5   4325497   protein CROWDED NUCLEI 4 
 osa-m.8   4325497   protein CROWDED NUCLEI 4 
 gma-u.4   100804453   protein CROWDED NUCLEI 4 
 gma-u.4   100783880   protein CROWDED NUCLEI 4 
 sly-u.4   101246104   protein CROWDED NUCLEI 4 
 ppo-u.4   7485207   protein CROWDED NUCLEI 4 
 mtr-u.4   25493541   protein CROWDED NUCLEI 4 

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Top 50 coexpressed genes to 4325497 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3250   Viral life cycle - HIV-1  1 34 -
 osa3022   Basal transcription factors  1 47 -
 osa3013   Nucleocytoplasmic transport  1 109 -
 osa3040   Spliceosome  2 196 -

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osa:LOC4325497 (protein CROWDED NUCLEI 4) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4325497
osa-r.5
for
4325497
osa-m.8
for
4325497
gma-u.4
for
100804453
gma-u.4
for
100783880
sly-u.4
for
101246104
ppo-u.4
for
7485207
mtr-u.4
for
25493541
1 LOC4352932 structural maintenance of chromosomes protein 1 4352932 Os12g0641500 7.3 7.3
 7.2
 12.1
7.0
 8.1
6.3
 9.7
 6.0
 4.6
3.4
2 LOC4328210 structural maintenance of chromosomes protein 3 4328210 Os02g0133300 7.1 7.9
 6.2
 9.0
6.4
 7.0
5.0
 8.2
 7.0
 5.1
3 LOC4344685 DNA topoisomerase 1 beta 4344685 Os08g0154600 7.0 8.5
 5.5
 4.8
3.3
 3.1
2.5
 2.8
 3.5
2.6
 4.8
2.1
4 LOC4330487 protein CROWDED NUCLEI 1 4330487 Os02g0710102 7.0 8.3
 5.6
 9.1
7.8
 8.5
8.3
 9.4
8.4
 5.3
5.3
 6.5
5.6
5 LOC4339717 auxilin-related protein 1 4339717 Os05g0579900 5.8 5.3
 6.2




6 LOC4333378 protein DEK 4333378 Os03g0596900 5.7 6.4
 5.1




7 LOC4332853 chromatin-remodeling ATPase INO80 4332853 Os03g0352500 5.6 5.3
 5.9
 6.6
5.6
 4.3
4.2
 5.6
 4.1
2.6
 5.3
8 CWZF7 Cysteine-tryptophan domain-containing zinc finger protein 7 4344236 Os07g0669800 5.5 6.2
 4.8
 4.6
4.4
 4.9
4.4
 4.5
4.1
 3.7
2.8
 6.0
5.6
9 LOC4339268 TNF receptor-associated factor homolog 1a 4339268 Os05g0508700 5.4 5.7
 5.1




10 LOC4342244 suppressor of RPS4-RLD 1 4342244 Os07g0113700 5.4 6.2
 4.5
 4.0
0.9
 2.6
0.8
 4.0
 2.8
 5.9
11 LOC4340605 fibrous sheath CABYR-binding protein 4340605 Os06g0237300 5.3 4.6
 6.0




12 LOC4333696 uncharacterized LOC4333696 4333696 Os03g0672700 5.2 5.3
 5.2
 3.0
2.1
 2.5
1.1
 3.1
 4.0
 3.7
3.0
13 LOC4336942 uncharacterized LOC4336942 4336942 Os04g0609900 5.2 5.6
 4.8




14 LOC4337784 probable ATP-dependent DNA helicase CHR12 4337784 Os05g0144300 5.2 6.0
 4.3
 9.2
5.8
 6.6
4.5
 3.4
 4.6
3.1
 3.3
1.4
15 TPR3 protein TPR3-like 4332285 Os03g0254700 5.1 5.1
 5.2
 2.3
1.9
 3.1
2.5
 2.4
1.3
 3.3
2.2
 4.4
3.4
16 LOC4349420 E3 ubiquitin-protein ligase BRE1-like 2 4349420 OSNPB_100565600 5.1 5.9
 4.2
 5.4
3.9
 4.7
4.5
 4.0
 4.3
 3.0
2.7
17 LOC4343953 calmodulin-binding transcription activator 1 4343953 Os07g0623100 5.0 6.9
 3.2
 4.0
3.7
 3.0
2.5
 2.7
1.8
 5.1
1.4
 5.1
2.7
18 LOC4324005 uncharacterized LOC4324005 4324005 Os01g0967100 5.0 6.4
 3.6
 6.5
4.6
 5.1
3.2
 2.8
 5.1
4.0
 5.4
2.7
19 LOC4325898 homeobox-DDT domain protein RLT2 4325898 Os01g0672300 5.0 5.2
 4.8
 7.0
5.5
 7.3
5.3
 4.7
4.2
 6.0
5.8
 4.7
4.5
20 CWZF3 Cysteine-tryptophan domain-containing zinc finger protein 3 4332823 Os03g0347300 4.9 6.0
 3.7
 4.6
4.4
 4.9
4.4
 4.5
4.1
 3.7
2.8
 6.0
5.6
21 LOC4336589 E3 ubiquitin-protein ligase BRE1-like 1 4336589 OSNPB_040550400 4.9 4.7
 5.1
 5.1
4.9
 4.2
3.8
 3.4
 4.7
3.1
 6.5
22 LOC4349371 uncharacterized LOC4349371 4349371 Os10g0559700 4.9 4.8
 4.9
 5.5
5.2
 4.7
4.4
 4.6
 7.8
4.5
 6.3
4.3
23 LOC4331556 splicing factor U2af large subunit B-like 4331556 Os03g0138100 4.8 4.9
 4.7
 8.4
0.9
 6.5
0.1
 4.8
 3.8
 3.9
24 LOC4329117 guanylate-binding protein 4 4329117 Os02g0307000 4.8 5.9
 3.7
 6.2
5.2
 6.9
4.6
 6.2
4.3
 4.6
3.3
 4.3
25 LOC4325212 E3 ubiquitin-protein ligase PRT6 4325212 Os01g0148050 4.7 6.1
 3.4
 3.4
3.4
 3.8
3.5
 3.0
1.2
 2.1
 5.1
26 LOC4334139 uncharacterized LOC4334139 4334139 Os03g0752700 4.7 5.5
 4.0
 3.3
1.6
 3.1
2.0
 2.1
-0.0
 2.8
2.6
 7.1
27 LOC4340565 homeobox protein HAZ1-like 4340565 Os06g0229300 4.7 4.4
 5.0
 4.0
2.9
 2.6
1.9
 1.9
 1.8
1.0
 4.1
28 LOC4334336 WPP domain-associated protein 4334336 Os03g0784600 4.7 4.5
 4.8
 6.1
4.9
 4.5
3.2
 6.4
 4.5
3.4
 4.5
29 LOC4338081 probable ubiquitin-like-specific protease 2B 4338081 Os05g0207900 4.6 5.5
 3.8
 2.4
1.9
 3.0
1.8
 2.0
1.7
 2.9
2.6
 4.5
4.3
30 LOC4344388 uncharacterized LOC4344388 4344388 Os07g0693700 4.6 4.9
 4.3
 2.8
2.3
 3.2
2.1
 2.4
0.4
 1.6
1.5
 4.7
4.0
31 LOC4328058 ATP-dependent helicase BRM 4328058 Os02g0114033 4.6 5.4
 3.8
 6.9
5.2
 6.9
4.7
 4.3
 4.8
3.9
 6.6
4.3
32 LOC9271693 myosin-17 9271693 Os03g0686300 4.6 4.2
 5.0
 2.0
2.0
 2.3
2.2
 3.8
1.4
 3.2
2.2
 3.9
1.9
33 LOC4336984 myosin-10 4336984 Os04g0614700 4.5 5.4
 3.7




34 LOC4324336 THO complex subunit 2 4324336 Os01g0916800 4.5 5.9
 3.1
 7.0
5.8
 5.6
4.7
 4.2
 4.3
3.4
 6.3
3.6
35 LOC4352386 uncharacterized LOC4352386 4352386 Os12g0527800 4.5 5.4
 3.6
 3.4
2.7
 2.9
1.5
 4.6
1.5
 2.2
2.0
 5.5
36 LOC4328295 pathogenesis-related homeodomain protein 4328295 Os02g0147800 4.5 5.0
 3.9
 4.8
3.8
 5.0
4.3
 3.9
 3.1
2.6
 2.9
37 LOC4348485 calmodulin-binding transcription activator 3 4348485 Os10g0375600 4.5 4.6
 4.4
 4.0
3.7
 3.0
2.5
 2.7
1.8
 5.1
1.4
 5.1
2.7
38 LOC9267065 chromatin structure-remodeling complex protein SYD 9267065 Os06g0255300 4.5 4.1
 4.9
 6.5
4.2
 5.0
3.5
 5.7
 5.3
3.6
 5.2
39 LOC9268973 CHD3-type chromatin-remodeling factor PICKLE 9268973 Os06g0183800 4.4 4.8
 4.1
 7.3
7.0
 6.1
5.2
 5.5
4.1
 6.4
5.6
 3.4
40 LOC4347029 transcription initiation factor TFIID subunit 2 4347029 Os09g0410300 4.4 6.1
 2.8
 4.5
2.9
 4.2
2.4
 5.4
 2.2
 2.4
41 LOC4344175 protein CHROMATIN REMODELING 5 4344175 Os07g0660200 4.4 5.2
 3.7
 4.4
3.5
 4.7
3.7
 4.3
 3.9
3.1
 4.7
4.6
42 LOC4334298 protein FAR1-RELATED SEQUENCE 4 4334298 Os03g0777700 4.4 5.1
 3.7




43 CHR4 CHROMATIN REMODELING 4 4343299 Os07g0497100 4.4 4.7
 4.0
 4.5
4.0
 4.9
4.4
 3.8
 3.9
3.7
 5.0
44 LOC4324222 transcriptional corepressor LEUNIG 4324222 Os01g0607400 4.3 5.6
 3.1
 3.2
3.1
 2.7
2.5
 2.9
 1.6
-0.4
 3.3
3.1
45 LOC4343162 uncharacterized LOC4343162 4343162 Os07g0461600 4.3 4.5
 4.2
 3.1
2.9
 2.4
2.2
 5.3
 2.1
1.6
 3.9
3.8
46 LOC4328238 probable histone acetyltransferase HAC-like 1 4328238 Os02g0137450 4.3 4.7
 3.9
 3.1
2.9
 3.3
1.9
 4.2
3.7
 3.8
3.7
 5.1
47 LOC4350336 uncharacterized LOC4350336 4350336 Os11g0303500 4.3 4.9
 3.6




48 LOC9267891 structural maintenance of chromosomes protein 6B 9267891 Os09g0121050 4.3 4.5
 4.0
 5.0
 5.3
 2.3
 3.4
 2.8
0.8
49 LOC4332818 lysine-specific demethylase JMJ25 4332818 Os03g0346700 4.2 5.3
 3.2
 4.6
3.7
 3.1
0.8
 3.3
 7.0
5.1
 5.3
50 LOC4344785 LRR receptor kinase BAK1-like 4344785 Os08g0174700 4.2 4.7
 3.8
 1.3
1.2
 1.6
1.5
 -0.1
-0.2
 1.4
1.2
 1.7
0.6
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