Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4324129   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 osa-r.5   4324129   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 osa-m.8   4324129   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 ath-u.4   PPR336   pentatricopeptide repeat 336 
 ath-u.4   AT1G11630   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.4   100793100   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 sly-u.4   101257607   pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like 
 ppo-u.4   18111275   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 mtr-u.4   25486130   pentatricopeptide repeat-containing protein At1g61870, mitochondrial 
 mtr-u.4   120576028   pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like 

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Top 50 coexpressed genes to 4324129 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3008   Ribosome biogenesis in eukaryotes  6 86 7.58
 osa3010   Ribosome  4 336 2.27
 osa240   Pyrimidine metabolism  1 63 -
 osa3013   Nucleocytoplasmic transport  2 109 -
 osa970   Aminoacyl-tRNA biosynthesis  1 117 -

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osa:LOC4324129 (pentatricopeptide repeat-containing protein At1g61870, mitochondrial) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4324129
osa-r.5
for
4324129
osa-m.8
for
4324129
ath-u.4
for
PPR336
ath-u.4
for
AT1G11630
gma-u.4
for
100793100
sly-u.4
for
101257607
ppo-u.4
for
18111275
mtr-u.4
for
25486130
mtr-u.4
for
120576028
1 LOC4348938 pentatricopeptide repeat-containing protein At1g61870, mitochondrial 4348938 Os10g0484900 5.5 7.9







2 LOC4342750 protein SLOW WALKER 1 4342750 Os07g0224900 5.5 6.2
 4.8
 7.6
 2.8
 9.8
7.8
 7.2
 5.3
5.3
 8.0
 1.2
3 LOC4343842 pentatricopeptide repeat-containing protein PNM1, mitochondrial 4343842 Os07g0603900 5.5 7.4
 3.5
 13.4
 3.7
 8.1
7.1
 6.3
 5.8
 5.7
 0.5
4 LOC4329957 pentatricopeptide repeat-containing protein At1g79540 4329957 Os02g0611400 5.4 7.9
 3.0
 7.4
 2.1
 6.3
5.2
 4.8
 3.2
 5.7
 0.8
5 LOC4325458 uncharacterized protein At2g39795, mitochondrial 4325458 Os01g0143300 5.4 6.4
 4.5
 7.6
7.1
 2.1
1.8
 7.0
6.3
 6.0
 3.3
2.6
 5.4
4.8
 0.6
0.4
6 LOC4340910 uncharacterized protein At2g39795, mitochondrial 4340910 Os06g0326500 5.4 6.6
 4.3






7 LOC4338500 ERBB-3 BINDING PROTEIN 1 4338500 Os05g0350500 5.3 7.3
 3.3
 5.0
 -1.1
 5.7
5.5
 6.4
5.1
 2.2
2.0
 5.4
2.9
 0.7
-0.3
8 LOC4344029 H/ACA ribonucleoprotein complex subunit 4 4344029 Os07g0636000 5.2 7.4
 3.0
 6.0
 -0.1
 9.0
6.9
 7.1
 4.0
3.7
 7.7
 1.0
9 LOC4338508 importin subunit beta-1 4338508 Os05g0353400 5.2 6.9
 3.4
 2.8
0.9
 -0.7
-1.5
4.0
 2.6
0.0

10 LOC4331241 pentatricopeptide repeat-containing protein At1g61870, mitochondrial 4331241 Os02g0829850 4.9 6.7


5.6



11 LOC4327779 exportin-2 4327779 Os01g0235400 4.9 5.3
 4.5
 2.4
 2.9
 5.2
4.9
 4.2
 3.1
3.0
 6.4
 0.4
12 LOC4340089 protein arginine N-methyltransferase PRMT10-like 4340089 OSNPB_060142800 4.9 5.9
 3.8
 3.5
 0.1
 1.8
1.4
 1.6
 -0.2
 4.3
 0.3
13 LOC4328041 pentatricopeptide repeat-containing protein At2g37230 4328041 Os02g0110400 4.8 6.2
 3.3
 6.0
 1.1
 9.9
5.5
 6.6
 2.8
 7.1
 0.8
14 LOC4339634 eukaryotic translation initiation factor 3 subunit D 4339634 Os05g0566500 4.8 6.2
 3.3
 7.4
6.1
 2.8
1.8
 9.8
7.3
 5.9
 1.7
1.1
 6.0
 0.6
15 LOC4344057 probable protein arginine N-methyltransferase 3 4344057 OSNPB_070640000 4.7 5.1
 4.3
 4.1
 -0.1
 7.2
5.9
 6.2
 3.4
 5.0
 -0.1
16 LOC4336241 ribosome-recycling factor 4336241 Os04g0490400 4.7 4.8
 4.6
 3.2
 0.9
 6.0
 4.0
 2.7
 2.5
 -0.6
17 LOC4329211 T-complex protein 1 subunit delta 4329211 Os02g0332200 4.6 6.5
 2.8
 4.2
 -0.3
 10.3
6.6
 5.1
 3.7
2.4
 6.8
 1.1
18 LOC4325056 uncharacterized LOC4325056 4325056 Os01g0858700 4.6 4.6
 4.6
 2.2
 -1.2
 0.1
-0.8
 0.1
 0.4
 0.8
 0.5
19 LOC4343048 uncharacterized LOC4343048 4343048 Os07g0423000 4.5 4.9
 4.1
 1.6
0.1
 2.1
0.4
 3.5
3.4
 0.4
 3.4
3.0
 3.6
2.9
 1.6
1.5
20 LOC4344162 30S ribosomal protein S9, mitochondrial 4344162 Os07g0658200 4.5 5.6
 3.3
 5.7
 1.3
 5.0
4.4
 5.7
 3.2
 5.8
 0.8
21 LOC4343020 uncharacterized LOC4343020 4343020 Os07g0415200 4.5 6.1
 2.8
 3.6
 2.3
 4.8
1.5
 2.5
 1.6
 4.8
 0.3
22 LOC4330354 aspartate--tRNA ligase 2, cytoplasmic 4330354 Os02g0686400 4.4 6.7
 2.2
 1.6
0.1
 -0.0
-0.7
 3.1
2.4
 5.5
 1.0
 4.5
 0.3
23 LOC4333869 zinc finger protein VAR3, chloroplastic 4333869 Os03g0708900 4.4 4.8
 4.0
 2.2
 -0.2
 3.5
2.9
 3.3
 3.0
 5.0
 0.2
24 LOC4324661 RGG repeats nuclear RNA binding protein A 4324661 Os01g0721900 4.4 6.4
 2.5
 0.6
-0.5
 0.2
-1.0
 5.6
5.5
 4.6
3.8
 2.1
0.7
 6.4
5.1
 0.7
-0.1
25 LOC4326654 pentatricopeptide repeat-containing protein At4g36680, mitochondrial 4326654 Os01g0616600 4.4 4.2
 4.5






26 LOC4351433 U3 small nucleolar ribonucleoprotein protein MPP10 4351433 Os12g0133900 4.4 5.7
 3.0
 3.4
 0.4
 6.9
6.2
 5.3
 5.0
3.5
 6.7
 0.7
27 LOC4325759 protein OSB3, chloroplastic/mitochondrial 4325759 Os01g0949060 4.4 4.9
 3.8
 2.8
0.7
 3.2
1.4
 1.8
 6.6
 2.7
 4.0
 -0.1
28 LOC4332851 nucleolar protein 56 4332851 Os03g0352300 4.4 6.0
 2.7
 5.2
2.8
 -0.7
-0.9
 6.4
6.1
 6.1
 4.4
3.2
 4.5
 0.4
29 LOC4333495 U3 snoRNP-associated protein-like YAOH 4333495 OSNPB_030625900 4.3 4.5
 4.2
 6.7
 2.0
 6.8
5.4
 6.2
 3.4
2.9
 4.3
 0.6
30 LOC9272023 pentatricopeptide repeat-containing protein At4g02820, mitochondrial 9272023 Os12g0527900 4.3 4.2
 4.4
 3.7
 2.8
 1.7
 4.9
 2.4
 -0.4
 0.0
31 LOC4338742 uncharacterized LOC4338742 4338742 Os05g0403600 4.3 4.6
 4.1
 1.6
0.1
 2.1
0.4
 3.5
3.4
 0.4
 3.4
3.0
 3.6
2.9
 1.6
1.5
32 LOC4332935 H/ACA ribonucleoprotein complex subunit 4 4332935 Os03g0370500 4.3 5.1
 3.5
 6.0
 -0.1
 9.0
6.9
 7.1
 4.0
3.7
 7.7
 1.0
33 LOC4328187 upstream activation factor subunit spp27 4328187 Os02g0130000 4.3 5.7
 2.9
 2.7
0.8
 0.3
0.3
 3.4
1.6
 4.4
3.1
 0.7
0.3
 3.1
2.0
 -0.5
-0.7
34 LOC4325739 uridine 5'-monophosphate synthase-like 4325739 OSNPB_010951200 4.3 5.6
 3.0
 3.9
 -0.4
 0.6
-1.1
 0.8
 2.8
2.7
 3.5
2.6
 0.6
0.3
35 LOC4346843 probable protein arginine N-methyltransferase 1 4346843 OSNPB_090359800 4.3 5.9
 2.7
 5.3
2.8
 0.4
0.2
 3.8
3.4
 5.9
4.7
 1.0
-0.7
 4.5
 0.6
36 LOC4342999 transcription termination factor MTEF18, mitochondrial 4342999 Os07g0409400 4.2 3.9
 4.6
 1.6
 4.2
 0.7
0.7
 0.2
 3.5
 1.3
0.4
 0.3
0.3
37 LOC4333677 acidic leucine-rich nuclear phosphoprotein 32-related protein 2-like 4333677 OSNPB_030668900 4.2 5.0
 3.4






38 LOC4330356 UPF0160 protein C694.04c 4330356 Os02g0686600 4.2 5.6
 2.8
 1.7
0.8
 0.6
-0.8
 3.4
3.3
 4.0
 0.5
 4.4
 0.4
39 LOC4327989 uncharacterized LOC4327989 4327989 Os02g0102400 4.2 6.0
 2.3
 6.2
 1.2
 4.8
3.6
 5.6
 2.6
 3.1
 0.6
40 LOC4336047 ATP-dependent RNA helicase SUV3L, mitochondrial-like 4336047 Os04g0459800 4.2 5.4
 2.9
 6.4
 2.9
 3.8
2.5
 4.4
 3.3
 2.9
 0.8
41 LOC4342742 pentatricopeptide repeat-containing protein At1g80270, mitochondrial 4342742 Os07g0222700 4.2 5.0
 3.3
 5.8
3.8
 2.7
1.4
 6.6
5.4
 6.3
 3.8
3.1
 6.6
6.0
 0.7
0.4
42 LOC4328001 U3 small nucleolar RNA-associated protein 6 homolog 4328001 Os02g0103900 4.1 5.3
 3.0
 4.9
 1.2
 6.3
5.5
 5.4
 4.4
 4.5
 -0.1
43 LOC4350404 pentatricopeptide repeat-containing protein At3g49240, mitochondrial 4350404 Os11g0433600 4.1 5.0
 3.2

6.3
5.9
 5.9
 4.8
 8.5
4.5
 0.9
0.2
44 LOC4327104 50S ribosomal protein L3-2, chloroplastic 4327104 Os01g0251100 4.1 4.7
 3.5
 6.1
 2.6
 4.7
4.6
 3.1
 2.1
1.2
 2.7
2.6
 0.7
-0.6
45 LOC4345679 uncharacterized protein At2g39795, mitochondrial 4345679 Os08g0439900 4.1 2.8
 5.4
 3.3
2.6
 2.8
1.6
 5.2
4.0
 6.3
3.9
 2.8
2.5
 4.1
1.0
 0.7
0.3
46 LOC4324613 mitochondrial acidic protein mam33 4324613 Os01g0771100 4.1 4.9
 3.2
 1.3
 -1.0
 2.8
2.2
 2.8
 2.0
 2.8
 -0.1
47 LOC4347787 25S rRNA (cytosine-C(5))-methyltransferase nop2 4347787 Os09g0551300 4.1 4.9
 3.3
 5.8
2.6
 1.6
1.3
 6.4
6.4
 4.2
2.8
 4.0
 4.0
 0.0
48 LOC4338555 pentatricopeptide repeat-containing protein At1g10270 4338555 Os05g0365500 4.1 5.3
 2.8
 4.4
4.3
 3.2
2.1
 6.7
6.2
 5.1
 5.2
1.8
 5.9
 0.2
49 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 4.0 3.8
 4.3






50 LOC4343808 pentatricopeptide repeat-containing protein At1g26460, mitochondrial 4343808 Os07g0599000 4.0 4.8
 3.3
 4.1
 0.4
 7.4
5.6
 7.1
 3.4
 4.6
 0.4
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