Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4324908   rhodanese-like domain-containing protein 4A, chloroplastic 
 osa-r.5   4324908   rhodanese-like domain-containing protein 4A, chloroplastic 
 osa-m.8   4324908   rhodanese-like domain-containing protein 4A, chloroplastic 
 ath-u.4   AT3G25480   Rhodanese/Cell cycle control phosphatase superfamily protein 
 gma-u.4   100808729   rhodanese-like domain-containing protein 4A, chloroplastic 
 gma-u.4   100815667   rhodanese-like domain-containing protein 4A, chloroplastic 
 sly-u.4   101255330   rhodanese-like domain-containing protein 4A, chloroplastic 
 ppo-u.4   7471127   rhodanese-like domain-containing protein 4A, chloroplastic 
 mtr-u.4   11436723   rhodanese-like domain-containing protein 4A, chloroplastic 

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Top 50 coexpressed genes to 4324908 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  11 336 10.06
 osa970   Aminoacyl-tRNA biosynthesis  2 70 2.02
 osa61   Fatty acid biosynthesis  1 47 -
 osa3018   RNA degradation  2 112 -
 osa1240   Biosynthesis of cofactors  2 248 -

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osa:LOC4324908 (rhodanese-like domain-containing protein 4A, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4324908
osa-r.5
for
4324908
osa-m.8
for
4324908
ath-u.4
for
AT3G25480
gma-u.4
for
100808729
gma-u.4
for
100815667
sly-u.4
for
101255330
ppo-u.4
for
7471127
mtr-u.4
for
11436723
1 LOC4331439 nascent polypeptide-associated complex subunit alpha-like protein 1 4331439 Os03g0121700 8.2 6.3
 10.1
 1.7
1.6
 1.3
1.0
 1.1
0.4
 0.6
0.3
 3.2
2.7
 2.3
0.3
2 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 7.1 6.0
 8.1
 3.5
 5.5
4.4
 6.1
4.6
 2.9
 3.8
 4.2
3 LOC4352538 psbP domain-containing protein 1, chloroplastic 4352538 Os12g0564400 6.5 5.5
 7.6
 3.7
 3.3
 3.8
 5.8
 4.0
1.2
 1.7
4 LOC4341869 50S ribosomal protein L24, chloroplastic 4341869 Os06g0683200 6.4 6.0
 6.8
 3.9
 4.5
3.3
 4.5
3.0
 4.5
 3.7
 3.7
5 LOC4327742 uncharacterized RNA methyltransferase pc1998 4327742 Os01g0920300 6.4 5.6
 7.1
 2.8
 3.8
 3.1
 3.1
 2.5
 0.1
6 LOC4340929 uncharacterized LOC4340929 4340929 Os06g0332800 6.3 5.8
 6.9
 6.9
 3.5
2.7
 3.9
3.6
 4.1
 3.9
1.1
 2.0
7 LOC4343402 protein LHCP TRANSLOCATION DEFECT 4343402 OSNPB_070520800 6.3 4.0
 8.7
 2.5
 3.8
3.2
 3.4
2.8
 3.8
 2.9
 2.7
8 LOC4331249 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 4331249 Os02g0831200 6.3 6.8
 5.8
 5.2
 3.5
 5.9
 4.1
 1.7
 3.2
9 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 6.3 5.9
 6.6
 4.4
 3.7
0.2
 3.2
-1.6
 2.9
 4.8
 2.0
10 LOC4334100 photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 4334100 Os03g0747700 6.2 6.3
 6.1
 1.6
 2.0
0.3
 1.4
0.5
 2.2
 2.0
 2.4
11 LOC4328994 proteinaceous RNase P 1, chloroplastic/mitochondrial 4328994 Os02g0273800 6.2 5.7
 6.6
2.9
 3.6
 1.9
 0.3
 3.2
12 LOC9270258 protease Do-like 2, chloroplastic 9270258 Os05g0147500 6.1 5.5
 6.6
 2.4
 6.2
5.6
 6.3
5.5
 2.6
2.0
 4.9
1.1
 2.4
13 LOC4342438 RNA-binding protein CP33, chloroplastic 4342438 Os07g0158300 6.0 6.8
 5.3
 5.7
 4.7
4.3
 5.1
5.1
 4.1
 4.9
3.2
 2.7
2.4
14 LOC4337177 glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial-like 4337177 6.0 6.9
 5.2
 4.6
 6.5
 5.9
 4.6
 3.5
 2.8
15 LOC4333848 30S ribosomal protein S13, chloroplastic 4333848 Os03g0704000 6.0 7.3
 4.7
 3.8
 3.3
2.8
 3.6
2.6
 4.1
 4.9
4.1
 3.4
16 LOC4349608 elongation factor P 4349608 Os11g0116400 6.0 3.8
 8.2
 5.1
 5.1
3.8
 5.5
4.4
 3.3
 4.4
 3.1
17 LOC4334749 30S ribosomal protein S6 alpha, chloroplastic 4334749 Os03g0843400 6.0 6.5
 5.4
 4.0
 5.4
4.8
 6.9
5.8
 6.1
 4.3
 3.0
18 LOC4352441 uncharacterized LOC4352441 4352441 Os12g0541500 5.9 7.6
 4.3
 4.6
 3.8
3.4
 4.3
4.2
 2.7
 4.0
 3.8
19 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 5.9 5.4
 6.3
 2.6
 4.3
 4.7
 4.0
3.4
 4.2
4.0
 4.3
20 LOC4335962 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic 4335962 Os04g0445700 5.7 5.7
 5.7
 1.2
 2.2
1.3
 2.2
1.1
 3.8
2.8
 2.7
2.4
 -0.5
-1.2
21 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 5.7 4.3
 7.0
 3.9
 4.2
3.0
 4.5
2.5
 3.7
 4.4
 2.5
22 LOC4330995 translation initiation factor IF3-4, chloroplastic 4330995 Os02g0794400 5.7 4.8
 6.6
 3.7
0.3
 3.5
3.3
 4.8
3.5
 2.7
 3.5
 3.4
23 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 5.6 4.7
 6.5
 3.8
 5.8
5.6
 5.8
5.2
 3.0
 3.3
2.7
 5.1
24 LOC4324026 protein FLUORESCENT IN BLUE LIGHT, chloroplastic 4324026 Os01g0510600 5.6 6.3
 4.9
 3.7
 2.7
2.6
 3.4
3.4
 4.5
1.0
 1.8
 2.5
25 LOC4347667 uncharacterized LOC4347667 4347667 Os09g0531100 5.6 5.9
 5.2
 4.1
 2.7
1.6
 2.8
1.9
 3.1
 1.3
 1.5
26 LOC4338540 S-adenosylmethionine carrier 1, chloroplastic/mitochondrial 4338540 Os05g0361900 5.6 2.6
 8.5
 0.9
0.1
 5.4
3.3
 5.0
3.6
 2.3
0.5
 3.0
1.5
 1.3
-0.3
27 wgl2 white green leaf2 4334247 Os03g0769100 5.6 5.7
 5.4
 3.9
 4.8
3.1
 6.3
4.3
 5.0
 7.0
4.3
 4.0
28 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 5.5 4.7
 6.4
 5.7
0.4
 4.2
 4.1
 2.8
2.3
 4.1
3.7
 3.9
29 LOC4331815 ylmG homolog protein 2, chloroplastic 4331815 Os03g0178200 5.5 6.5
 4.5
 3.0
 4.2
2.8
 5.5
3.8
 3.3
 5.4
 3.5
30 LOC4342497 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 4342497 OSNPB_070168000 5.5 4.9
 6.2
 3.6
 4.5
 3.2
 2.5
 3.4
3.1
 1.6
31 LOC9267495 signal recognition particle 54 kDa protein, chloroplastic 9267495 Os11g0153600 5.5 7.0
 4.0
 2.4
 6.1
4.4
 5.7
3.9
 3.0
 2.9
2.2
 3.0
32 LOC4326614 DEAD-box ATP-dependent RNA helicase 25-like 4326614 OSNPB_010618400 5.5 5.5
 5.4
 1.9
-1.5
 4.3
2.6
 2.6
2.3
 1.1
 4.2
2.5
 1.1
0.8
33 LOC4330025 lysine--tRNA ligase, chloroplastic/mitochondrial 4330025 Os02g0623500 5.5 4.0
 6.9
 3.1
 7.2
 5.8
 3.5
 3.8
 0.8
34 LOC4346605 30S ribosomal protein 2, chloroplastic 4346605 Os09g0279500 5.4 5.3
 5.5
 7.7
 5.3
4.4
 5.9
5.0
6.6
 2.4
35 LOC4332957 RNA-binding protein CP29B, chloroplastic 4332957 Os03g0376600 5.4 3.7
 7.0
 3.5
2.2
 6.0
4.9
 5.0
4.1
 3.6
3.4
 6.3
3.3
 3.3
36 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 5.3 4.5
 6.2
 4.0
 3.3
2.8
 3.8
3.7
 7.8
 4.4
 3.6
37 LOC4350378 protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic-like 4350378 Os11g0425300 5.3 6.0
 4.7
 3.5
 4.2
2.1
 3.3
2.3
 1.4
 2.9
 1.9
38 LOC4328432 porphobilinogen deaminase, chloroplastic-like 4328432 OSNPB_020168800 5.3 3.4
 7.2
 5.2
 3.1
2.9
 4.3
3.3
 4.7
 2.2
1.7
 2.7
39 LOC4338460 uncharacterized LOC4338460 4338460 Os05g0337400 5.3 4.5
 6.1
 4.9
 5.9
5.1
 7.4
6.2
 4.9
 6.4
 3.1
40 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 5.3 4.9
 5.7
 5.6
 4.0
 3.8
 3.2
 2.9
 4.4
41 wsl6 white stripe leaf6 9271571 OSNPB_050567300 5.3 4.3
 6.3
 4.8
 5.2
2.1
 5.3
1.7
 3.9
 3.2
 3.6
42 LOC4332089 50S ribosomal protein L15, chloroplastic 4332089 Os03g0219900 5.3 6.0
 4.6
 3.1
 3.5
 4.6
 6.0
 5.9
0.7
 4.8
43 LOC4328331 uncharacterized LOC4328331 4328331 Os02g0152900 5.2 5.7
 4.8





44 LOC4334778 arginine decarboxylase 4334778 Os03g0848100 5.2 5.5
 5.0
1.8
 2.6
 2.5
0.8
 2.0
 2.9
-0.6
45 LOC4334445 probable GTP-binding protein OBGC2 4334445 OSNPB_030799700 5.2 4.8
 5.6
4.6
2.9
 3.1
1.3
 4.6
 3.0
 2.6
46 LOC4331459 50S ribosomal protein L5, chloroplastic-like 4331459 OSNPB_030125000 5.2 4.7
 5.6
 2.3
 4.3
3.3
 3.8
3.5
 5.3
 5.1
1.8
 4.8
47 LOC4330746 photosynthetic NDH subunit of lumenal location 4, chloroplastic 4330746 Os02g0751600 5.2 5.4
 4.9
 1.9
 4.5
 3.5
2.8
 1.0
48 LOC4334131 50S ribosomal protein L6, chloroplastic 4334131 Os03g0751400 5.1 3.6
 6.6
 3.9
 4.2
3.0
 4.5
2.5
 3.7
 4.4
 2.5
49 LOC4340846 trigger factor-like protein TIG, Chloroplastic 4340846 Os06g0308000 5.1 4.9
 5.3
 7.3
 5.6
5.0
 7.6
5.7
 5.8
 3.5
 3.5
50 LOC4331470 uncharacterized LOC4331470 4331470 Os03g0126300 5.1 4.4
 5.8
 2.1
 3.2
 3.1
 2.6
 3.5
 2.6
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