Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4324319   pentatricopeptide repeat-containing protein At3g29230 
 osa-r.5   4324319   pentatricopeptide repeat-containing protein At3g29230 
 osa-m.8   4324319   pentatricopeptide repeat-containing protein At3g29230 

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Top 50 coexpressed genes to 4324319 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa946   Degradation of flavonoids  1 13 -
 osa460   Cyanoamino acid metabolism  1 55 -
 osa999   Biosynthesis of various plant secondary metabolites; Including: Crocin biosynthesis, Cannabidiol biosynthesis, Mugineic acid biosynthesis, Pentagalloylglucose biosynthesis, Benzoxazinoid biosynthesis, Gramine biosynthesis, Coumarin biosynthesis, Furanocoumarin biosynthesis, Hordatine biosynthesis, Podophyllotoxin biosynthesis  1 64 -
 osa500   Starch and sucrose metabolism  2 173 -
 osa3010   Ribosome  1 353 -

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osa:LOC4324319 (pentatricopeptide repeat-containing protein At3g29230) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target

osa-u.4
for
4324319
osa-r.5
for
4324319
osa-m.8
for
4324319
1 LOC4350793 pentatricopeptide repeat-containing protein At4g14850 4350793 Os11g0583300 3.9 2.1
 5.8
2 LOC4334566 pentatricopeptide repeat-containing protein At2g41080 4334566 Os03g0816600 3.8 2.3
 5.2
3 LOC4327598 putative pentatricopeptide repeat-containing protein At5g40405 4327598 Os01g0814300 3.6 2.1
 5.2
4 LOC4351121 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4351121 Os11g0680200 3.6 2.7
 4.5
5 LOC4338983 pentatricopeptide repeat-containing protein At2g27610 4338983 Os05g0455900 3.4 2.5
 4.2
6 LOC4351313 pentatricopeptide repeat-containing protein At4g18840 4351313 Os12g0114400 3.3 2.1
 4.4
7 LOC4330866 separase 4330866 Os02g0770700 3.0 2.9
 3.2
8 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 3.0 0.7
 5.3
9 LOC4334314 pentatricopeptide repeat-containing protein At4g21300 4334314 Os03g0781200 2.9 2.9
 2.9
10 LOC9267607 MLO-like protein 13 9267607 Os06g0610500 2.8 2.0
 3.7
11 LOC4342999 transcription termination factor MTEF18, mitochondrial 4342999 Os07g0409400 2.8 2.5
 3.0
12 LOC4344057 probable protein arginine N-methyltransferase 3 4344057 OSNPB_070640000 2.8 2.6
 3.0
13 LOC4351284 putative pentatricopeptide repeat-containing protein At3g08820 4351284 Os12g0109300 2.8 1.3
 4.2
14 LOC4331821 tubulin--tyrosine ligase-like protein 12 4331821 Os03g0179000 2.8 1.4
 4.2
15 LOC4344519 exosome complex component RRP41-like 4344519 Os08g0116800 2.8 1.9
 3.6
16 LOC9272689 casparian strip membrane protein 3 9272689 OSNPB_060231050 2.8 0.8
 4.7
17 LOC4342673 rRNA biogenesis protein RRP5 4342673 Os07g0203300 2.8 2.2
 3.3
18 LOC4332866 probable diphthine methyl ester synthase 4332866 Os03g0355800 2.7 2.9
 2.4
19 LOC4345655 pentatricopeptide repeat-containing protein At3g47530 4345655 Os08g0434000 2.6 1.6
 3.7
20 LOC4336394 pentatricopeptide repeat-containing protein At3g09040, mitochondrial 4336394 Os04g0514500 2.6 2.7
 2.5
21 LOC4339437 glucan endo-1,3-beta-glucosidase 8 4339437 Os05g0535100 2.6 1.7
 3.6
22 LOC9269589 uncharacterized LOC9269589 9269589 Os10g0154600 2.6 2.6
 2.6
23 LOC4344353 pentatricopeptide repeat-containing protein At1g13040, mitochondrial 4344353 Os07g0688100 2.6 2.1
 3.1
24 LOC4350437 short integuments 2, mitochondrial 4350437 Os11g0447300 2.6 0.4
 4.7
25 LOC4336621 BEACH domain-containing protein C2 4336621 Os04g0555600 2.6 2.9
 2.2
26 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 2.6 1.8
 3.3
27 LOC4352101 O-fucosyltransferase 1 4352101 Os12g0425600 2.5 1.6
 3.4
28 LOC4337804 pentatricopeptide repeat-containing protein At3g05340 4337804 Os05g0147600 2.5 0.7
 4.3
29 LOC4334546 probable DNA gyrase subunit A, chloroplastic/mitochondrial 4334546 OSNPB_030812000 2.5 1.6
 3.4
30 LOC9267687 pentatricopeptide repeat-containing protein At5g43790 9267687 Os12g0128200 2.5 0.6
 4.4
31 LOC4350640 uncharacterized LOC4350640 4350640 Os11g0532000 2.5 1.8
 3.1
32 LOC4346770 L-type lectin-domain containing receptor kinase IX.1 4346770 Os09g0334800 2.5 1.4
 3.6
33 LOC4329577 transcription factor E2FB 4329577 Os02g0537500 2.5 2.7
 2.2
34 LOC4328019 putative pentatricopeptide repeat-containing protein At1g68930 4328019 Os02g0106300 2.4 2.6
 2.3
35 LOC4334515 probable cellulose synthase A catalytic subunit 2 [UDP-forming] 4334515 OSNPB_030808100 2.4 1.7
 3.2
36 LOC4333891 zinc finger protein VAR3, chloroplastic 4333891 Os03g0712200 2.4 1.9
 3.0
37 LOC4330315 pentatricopeptide repeat-containing protein At1g74900, mitochondrial 4330315 Os02g0679200 2.4 2.7
 2.1
38 LOC4347076 probable E3 ubiquitin-protein ligase RNF144A-B 4347076 Os09g0419500 2.4 1.2
 3.6
39 LOC4330465 ATPase family AAA domain-containing protein 3C 4330465 Os02g0706500 2.4 2.3
 2.5
40 LOC4347727 WD-40 repeat-containing protein MSI3 4347727 Os09g0540600 2.4 2.3
 2.5
41 LOC4349672 non-structural maintenance of chromosomes element 1 homolog 4349672 Os11g0130300 2.4 1.2
 3.6
42 LOC4333842 beta-glucosidase 8-like 4333842 OSNPB_030703100 2.4 3.0
 1.7
43 LOC4344035 pentatricopeptide repeat-containing protein At5g48910 4344035 Os07g0636900 2.4 2.5
 2.2
44 LOC4334449 protein argonaute MEL1-like 4334449 OSNPB_030800200 2.4 1.9
 2.9
45 LOC4346068 isoamylase 1, chloroplastic-like 4346068 OSNPB_080520900 2.4 1.9
 2.8
46 LOC4334564 uncharacterized LOC4334564 4334564 Os03g0816400 2.3 1.9
 2.8
47 LOC4337062 uncharacterized LOC4337062 4337062 Os04g0625350 2.3 2.3
 2.3
48 LOC4348935 uncharacterized LOC4348935 4348935 Os10g0484400 2.3 2.6
49 LOC4329852 NAC domain-containing protein 73 4329852 Os02g0594800 2.3 3.0
 1.7
50 LOC4346491 DNA-directed RNA polymerase 1B, mitochondrial 4346491 Os09g0246200 2.3 2.6
 2.1
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