Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4327742   uncharacterized RNA methyltransferase pc1998 
 osa-r.5   4327742   uncharacterized RNA methyltransferase pc1998 
 osa-m.8   4327742   uncharacterized RNA methyltransferase pc1998 
 ath-u.4   AT3G27180   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 gma-u.4   100816889   uncharacterized RNA methyltransferase pc1998 
 sly-u.4   101250276   uncharacterized RNA methyltransferase pc1998 
 ppo-u.4   18095261   uncharacterized RNA methyltransferase pc1998 
 mtr-u.4   25497845   uncharacterized RNA methyltransferase pc1998 

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Top 50 coexpressed genes to 4327742 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  5 336 3.16
 osa860   Porphyrin metabolism  2 42 2.45
 osa3060   Protein export  2 49 2.32
 osa970   Aminoacyl-tRNA biosynthesis  2 70 2.02
 osa195   Photosynthesis  1 77 -

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osa:LOC4327742 (uncharacterized RNA methyltransferase pc1998) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4327742
osa-r.5
for
4327742
osa-m.8
for
4327742
ath-u.4
for
AT3G27180
gma-u.4
for
100816889
sly-u.4
for
101250276
ppo-u.4
for
18095261
mtr-u.4
for
25497845
1 LOC4336948 methionine aminopeptidase 1B, chloroplastic 4336948 Os04g0610500 10.2 11.4
 9.1
 5.3
 4.4
2.6
 3.8
 1.5
 2.2
2 LOC9270258 protease Do-like 2, chloroplastic 9270258 Os05g0147500 8.4 8.2
 8.6
 3.6
 5.4
5.0
 4.7
3.7
 2.3
2.1
 3.3
3 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 7.7 7.8
 7.6
 4.7
 3.6
 3.0
 2.6
 1.5
4 LOC4334030 putative rRNA methyltransferase YlbH 4334030 Os03g0736400 7.5 7.4
 7.5
 5.3
 4.2
 3.2
 2.2
 1.5
5 LOC4328072 uncharacterized LOC4328072 4328072 Os02g0115600 7.2 7.8
 6.5
 2.9
 4.5
 4.1
 2.7
 1.4
6 LOC4344632 multiple organellar RNA editing factor 9, chloroplastic 4344632 Os08g0139100 7.0 6.4
 7.6
 5.7
2.7
 4.5
3.8
 3.4
 1.7
1.2
 1.1
1.0
7 LOC4324049 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 4324049 Os01g0507900 6.8 7.2
 6.3
 2.1
 4.5
4.2
 3.7
 3.3
 0.5
8 LOC4348816 tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 4348816 Os10g0461100 6.6 6.3
 7.0
 3.7
 3.3
2.6
 2.1
 0.5
0.4
 0.3
9 LOC4333096 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 4333096 Os03g0411500 6.6 6.6
 6.6
 3.3
 2.9
2.4
 3.9
 2.0
0.4
 0.6
10 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 6.6 6.4
 6.8
 1.2
 4.3
2.8
 3.6
 0.6
 1.7
11 wsl6 white stripe leaf6 9271571 OSNPB_050567300 6.5 5.7
 7.3
 7.5
 4.5
1.4
 2.6
 1.5
 0.5
12 LOC4344001 29 kDa ribonucleoprotein A, chloroplastic 4344001 Os07g0631900 6.5 6.1
 6.8
 4.9
3.7
 4.2
4.2
 3.1
2.6
 2.9
2.6
 3.2
13 LOC9267495 signal recognition particle 54 kDa protein, chloroplastic 9267495 Os11g0153600 6.4 5.8
 7.1
 3.4
 5.3
3.0
 4.8
 1.7
1.6
 1.3
14 LOC4324908 rhodanese-like domain-containing protein 4A, chloroplastic 4324908 Os01g0889800 6.4 5.6
 7.1
 2.8
 3.8
3.1
 3.1
 2.5
 0.1
15 LOC4350988 GTPase Der 4350988 Os11g0638000 6.3 6.7
 6.0
 7.9
 6.6
 2.6
 2.6
 1.8
16 LOC4334537 magnesium-chelatase subunit ChlD, chloroplastic-like 4334537 OSNPB_030811100 6.3 6.0
 6.6
 3.2
 3.1
1.7
 4.5
 1.4
 2.1
17 LOC4331652 putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic 4331652 Os03g0152700 6.2 5.2
 7.3
 6.4
 4.8
 4.1
 2.3
 1.9
18 LOC4330025 lysine--tRNA ligase, chloroplastic/mitochondrial 4330025 Os02g0623500 6.2 6.5
 5.9
 4.0
 3.8
 4.7
 2.1
 1.5
19 LOC4343647 uncharacterized LOC4343647 4343647 Os07g0568900 6.2 5.3
 7.0




20 LOC4333618 transcription antitermination protein NusB 4333618 Os03g0656900 6.2 6.3
 6.0
 6.0
 6.6
4.2
 3.2
 3.0
 1.7
21 LOC4346136 glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 4346136 OSNPB_080532200 6.1 6.4
 5.8
 4.6
4.0
 3.0
3.0
 4.2
 2.1
 1.0
22 LOC4325462 uncharacterized protein At2g39795, mitochondrial 4325462 Os01g0143800 6.1 6.4
 5.8




23 LOC4344860 pentatricopeptide repeat-containing protein At3g59040 4344860 Os08g0191900 6.0 6.1
 5.9
 4.9
 4.7
4.2
 4.8
 2.6
 3.9
24 LOC4326614 DEAD-box ATP-dependent RNA helicase 25-like 4326614 OSNPB_010618400 6.0 5.8
 6.2
 7.7
3.1
 3.1
1.7
 1.6
 2.5
1.3
 3.7
1.4
25 LOC4349080 endonuclease MutS2 4349080 Os10g0509000 6.0 5.8
 6.2
 3.2
 1.8
 2.4
 0.4
0.0
 1.5
26 LOC4338780 uncharacterized protein Cbei_0202 4338780 Os05g0411200 5.9 4.8
 7.1
 6.3
 5.7
2.7
 2.4
 1.5
 3.3
27 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 5.9 4.4
 7.5
 2.6
 5.5
4.9
 3.0
 1.7
 1.1
28 LOC4345097 preprotein translocase subunit SECY, chloroplastic-like 4345097 OSNPB_080254500 5.9 6.9
 4.9
 2.9
 2.5
 3.3
 1.1
1.0
 1.3
29 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 5.9 6.1
 5.6
 2.2
 2.4
 4.7
3.8
 1.6
0.3
 1.3
30 LOC4325304 pentatricopeptide repeat-containing protein At4g21190 4325304 Os01g0757700 5.9 5.9
 5.9
 3.7
 5.2
5.0
 3.5
 2.8
 1.0
31 LOC4330763 50S ribosomal protein L29, chloroplastic 4330763 Os02g0754300 5.8 6.9
 4.8
 0.8
 3.8
3.3
 3.3
2.4
 1.6
1.5
 1.1
32 LOC4327567 Ribonuclease III domain-containing protein RNC1, chloroplastic 4327567 OSNPB_010810100 5.8 5.7
 6.0
 4.8
 4.9
4.3
 2.0
 0.8
 0.6
33 LOC4340846 trigger factor-like protein TIG, Chloroplastic 4340846 Os06g0308000 5.8 5.7
 5.9
 5.0
 3.5
2.9
 5.5
 2.0
 2.4
34 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 5.8 5.5
 6.1
 2.3
 4.1
3.6
 4.9
 2.1
1.5
 2.1
35 LOC4336085 CRM-domain containing factor CFM2, chloroplastic 4336085 Os04g0464800 5.8 8.2
3.4
 4.8
2.7
 2.0
 1.7
 4.9
36 LOC4334632 transcription termination/antitermination protein NusG 4334632 Os03g0825500 5.7 5.3
 6.2
 4.7
 2.9
 5.6
 1.2
 0.8
37 LOC4352538 psbP domain-containing protein 1, chloroplastic 4352538 Os12g0564400 5.7 5.8
 5.6
 1.9
 0.5
 3.1
 0.6
0.3
 0.9
38 LOC4325010 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 4325010 Os01g0901900 5.6 6.2
 5.1
 8.9
 3.6
3.3
 3.6
 2.9
 2.8
39 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 5.6 5.9
 5.4
 5.8
5.5
 3.4
3.1
 3.5
0.7
 1.2
1.0
 1.8
1.0
40 LOC4345863 RNA-binding protein CP33, chloroplastic 4345863 Os08g0483200 5.6 5.2
 5.9
 5.3
 4.5
3.0
 3.7
 1.9
 1.3
41 LOC4349098 uncharacterized LOC4349098 4349098 Os10g0512500 5.6 3.8
 7.3
 5.3
 4.2
 4.3
 2.0
 0.5
42 WP1 white panicle1 4342467 Os07g0163500 5.5 5.8
 5.3
 6.5
 4.5
 4.8
 0.5
 2.0
43 LOC4329441 uncharacterized LOC4329441 4329441 Os02g0507400 5.5 6.4
 4.5
 0.7
 5.5
4.6
 1.9
 1.0
0.9
 0.9
44 LOC4334251 cytochrome c biogenesis protein CCS1, chloroplastic-like 4334251 OSNPB_030769600 5.5 5.1
 5.8
 3.1
 5.6
 2.5
 0.8
 3.0
45 LOC4335917 uncharacterized LOC4335917 4335917 Os04g0438300 5.5 4.9
 6.0
 2.9
 4.0
2.5
1.7
 0.5
46 LOC4342717 pentatricopeptide repeat-containing protein At2g41720 4342717 Os07g0213300 5.4 5.8
 5.1
 3.2
 3.4
 1.9
 1.9
 1.3
47 LOC4334749 30S ribosomal protein S6 alpha, chloroplastic 4334749 Os03g0843400 5.4 5.6
 5.2
 1.5
 4.3
3.6
 3.5
 2.7
 -0.2
48 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 5.4 5.5
 5.2
 2.5
2.3
 2.1
 2.5
0.9
 1.5
1.5
 0.5
49 LOC4334910 uncharacterized LOC4334910 4334910 Os04g0105700 5.3 4.9
 5.7
 3.1
 3.0
 3.4
 3.0
 2.7
50 LOC4343267 peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic 4343267 Os07g0490400 5.3 5.5
 5.1
 3.2
 3.9
2.3
 3.4
 3.6
 2.5
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