Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4328239   ribosomal RNA small subunit methyltransferase H 
 osa-r.5   4328239   ribosomal RNA small subunit methyltransferase H 
 osa-m.8   4328239   ribosomal RNA small subunit methyltransferase H 
 ath-u.4   AT5G10910   mraW methylase family protein 
 gma-u.4   121172637   ribosomal RNA small subunit methyltransferase H-like 
 gma-u.4   100803819   ribosomal RNA small subunit methyltransferase H 
 gma-u.4   100787277   ribosomal RNA small subunit methyltransferase H 
 sly-u.4   101266581   ribosomal RNA small subunit methyltransferase H 
 ppo-u.4   7460963   ribosomal RNA small subunit methyltransferase H 
 mtr-u.4   25481894   ribosomal RNA small subunit methyltransferase H 

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Top 50 coexpressed genes to 4328239 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa970   Aminoacyl-tRNA biosynthesis  4 70 4.84
 osa670   One carbon pool by folate  1 16 -
 osa30   Pentose phosphate pathway  1 57 -
 osa51   Fructose and mannose metabolism  1 64 -
 osa10   Glycolysis / Gluconeogenesis  1 143 -

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osa:LOC4328239 (ribosomal RNA small subunit methyltransferase H) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4328239
osa-r.5
for
4328239
osa-m.8
for
4328239
ath-u.4
for
AT5G10910
gma-u.4
for
121172637
gma-u.4
for
100803819
gma-u.4
for
100787277
sly-u.4
for
101266581
ppo-u.4
for
7460963
mtr-u.4
for
25481894
1 LOC4342744 KHG/KDPG aldolase 4342744 Os07g0222900 5.9 4.0
 7.8
0.5
 0.8
 1.0
 2.2
 1.5
2 LOC4339632 uncharacterized LOC4339632 4339632 Os05g0566300 5.5 4.7
 6.3
 4.9
 2.7
1.3
 3.2
2.5
 3.6
1.7
 3.0
 1.5
 2.3
3 LOC4327529 thioredoxin-like fold domain-containing protein MRL7 homolog, chloroplastic 4327529 Os01g0829000 5.3 5.0
 5.6
 4.3
 1.4
1.4
 1.3
1.1
 3.6
-0.0
 3.5
 3.1
 1.7
4 LOC4345875 uncharacterized LOC4345875 4345875 Os08g0484800 5.2 2.7
 7.7
 1.9
 2.5
1.2
 3.2
2.1
 1.8
1.7
 0.7
 2.9
1.7
 2.0
5 LOC4330652 pentatricopeptide repeat-containing protein At2g13600 4330652 Os02g0735800 5.0 6.0
 4.1






6 LOC4351951 oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 4351951 Os12g0270100 5.0 4.4
 5.5
 1.3
 0.5
 0.8
 1.4
 2.5
 2.4
 1.6
7 LOC4333992 ribosomal RNA small subunit methyltransferase E 4333992 Os03g0729700 4.9 3.8
 6.0
 2.8
 1.4
 1.9
 0.6
 1.9
 1.9
 0.3
8 LOC4325601 protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic-like 4325601 Os01g0769900 4.9 5.0
 4.7
 8.5
 1.5
 4.8
 2.9
 3.6
 2.0
 4.2
9 LOC4327755 uncharacterized protein At4g37920 4327755 Os01g0306800 4.8 5.8
 3.9
 5.7
 2.8
2.0
 4.3
2.7
 3.1
2.4
 4.1
 1.4
 4.0
10 LOC4334836 pentatricopeptide repeat-containing protein At5g46580, chloroplastic 4334836 Os03g0856100 4.8 3.7
 6.0
 5.9
 0.2
-0.1
 1.4
1.0
 2.8
1.9
 2.2
 1.7
 2.4
11 LOC4339930 uncharacterized LOC4339930 4339930 Os06g0116400 4.8 5.5
 4.2
 1.5
-1.3
 0.7
0.3
 1.1
0.9
 4.0
1.7
 0.7
-0.5
 2.2
0.8
 -2.3
12 LOC4341770 fructose-1,6-bisphosphatase, chloroplastic 4341770 Os06g0664200 4.8 4.3
 5.2
 2.6
 0.3
-0.8
 0.2
-0.3
 3.6
0.9
 2.4
 0.8
 2.2
13 LOC4338780 uncharacterized protein Cbei_0202 4338780 Os05g0411200 4.6 5.0
 4.2
 3.7
 2.1
1.2
 3.2
2.2
 3.2
2.1
 2.5
 0.5
 1.0
14 LOC4340109 single-stranded DNA-binding protein WHY1, chloroplastic 4340109 Os06g0145800 4.6 5.1
 4.1
 5.6
5.3
 1.5
1.2
 2.8
2.6
 3.4
3.3
 2.0
 4.1
2.0
 3.0
0.6
15 LOC4352705 renalase 4352705 Os12g0597400 4.6 5.1
 4.1
 2.9
 0.9
 1.4
 0.5
 4.7
 2.7
 0.3
16 LOC4336891 pentatricopeptide repeat-containing protein At3g22150, chloroplastic 4336891 Os04g0602600 4.6 4.0
 5.2
 2.2
 0.4
 0.8
 2.4
 0.6
 2.1
 1.7
17 LOC4327311 uncharacterized RNA methyltransferase BH0687 4327311 Os01g0193600 4.6 4.9
 4.2
 3.6
 2.2
 2.9
 1.9
 1.9
 2.8
 2.4
18 LOC4338098 pentatricopeptide repeat-containing protein At3g49170, chloroplastic 4338098 Os05g0212100 4.5 2.9
 6.1
 2.6
 0.1
 0.7
 1.3
 1.0
2.6
19 LOC4327084 pentatricopeptide repeat-containing protein DOT4, chloroplastic 4327084 Os01g0205200 4.4 4.6
 4.3
 4.6
 1.5
-0.2
 1.5
0.4
 1.1
0.8

2.0
20 LOC4334236 pentatricopeptide repeat-containing protein At5g46460, mitochondrial 4334236 Os03g0767700 4.4 3.2
 5.6
 2.6





21 LOC4332957 RNA-binding protein CP29B, chloroplastic 4332957 Os03g0376600 4.4 5.0
 3.9
 2.2
1.6
 0.9
0.8
 2.1
2.1
 2.2
0.9
 2.2
1.7
 2.2
1.4
 2.9
22 LOC4337177 glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial-like 4337177 4.4 4.5
 4.3
 3.1
 0.3
 1.6
 1.7
 3.3
 1.2
 1.7
23 LOC4324505 aspartate--tRNA ligase, chloroplastic/mitochondrial 4324505 Os01g0153400 4.4 5.1
 3.6
 3.7
 1.7
1.4
 2.7
0.9
 2.7
1.4
 3.1
 2.1
2.0
 1.9
1.5
24 LOC4346938 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic 4346938 OSNPB_090382400 4.3 4.5
 4.2
 5.0
 2.8
 3.6
 4.1
 2.0
 3.1
 1.2
25 LOC4349608 elongation factor P 4349608 Os11g0116400 4.3 4.2
 4.4
 2.1
 1.8
1.2
 2.3
1.6
 2.8
1.7
 0.6
 2.4
 0.3
26 LOC4332158 GTP-binding protein At2g22870 4332158 Os03g0232500 4.3 3.2
 5.3
 2.4
 1.5
1.2
 3.1
1.7
 1.4
1.2
 2.7
 1.5
 1.9
27 LOC4339896 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4339896 Os06g0112000 4.3 4.0
 4.5
 2.2
 1.4
0.2
 1.2
0.7
 1.5
1.5
 1.3
 1.0
 1.6
1.3
28 LOC4332811 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 4332811 Os03g0344900 4.3 4.7
 3.9
 1.6
 0.8
 2.4
 0.9
 2.9
 2.4
 2.3
29 LOC9267409 uncharacterized protein YnbB 9267409 Os04g0636300 4.2 2.7
 5.8
2.5
0.8
 2.3
-0.3
 3.8
1.3
 3.1
 0.7
 0.2
30 LOC4351767 uncharacterized protein ycf45 4351767 Os12g0209000 4.2 3.6
 4.8
 2.3
 0.7
 1.8
 3.8
 1.8
2.7
31 LOC9270258 protease Do-like 2, chloroplastic 9270258 Os05g0147500 4.2 4.1
 4.3
 0.8
 1.4
1.4
 3.3
2.4
 3.8
2.5
 2.9
2.3
 2.7
1.8
 1.8
32 LOC4342081 RNA pseudouridine synthase 2, chloroplastic-like 4342081 OSNPB_060717400 4.2 4.4
 3.9
 4.0
 0.8
 2.0
 2.9
 1.3
 1.2
 0.7
33 LOC9269534 ribosome-binding ATPase YchF 9269534 Os03g0781000 4.1 3.8
 4.5
 3.1
 -0.4
 0.8
 3.1
 2.3
 3.1
 0.0
34 LOC4326261 DNA gyrase subunit B, chloroplastic/mitochondrial-like 4326261 OSNPB_010268300 4.1 3.2
 5.0
 5.3
3.9
 1.1
0.9
 1.0
0.8
 1.6
-0.5
 3.6
 3.6
 0.4
35 LOC4352413 acyl carrier protein 1, chloroplastic 4352413 Os12g0534200 4.1 3.4
 4.8
 -0.2
-0.5
 2.3
0.9
 1.7
0.4
 1.2
0.3
 1.6
-1.2
 0.3
-0.8
 0.5
-0.3
36 LOC4324908 rhodanese-like domain-containing protein 4A, chloroplastic 4324908 Os01g0889800 4.1 3.4
 4.8
 2.1
 1.0
0.4
 1.5
1.1
 5.9
2.0
 1.7
 2.0
 2.4
37 LOC4328994 proteinaceous RNase P 1, chloroplastic/mitochondrial 4328994 Os02g0273800 4.1 4.1
 4.0
0.6
 1.6
 2.9
 1.6
 1.3
 1.9
38 LOC4331225 uncharacterized LOC4331225 4331225 Os02g0827600 4.0 4.7
 3.4
 2.8
 1.6
1.2
 3.1
2.3
 2.5
1.3
 1.8
 2.0
 1.7
39 LOC4343250 asparagine--tRNA ligase, chloroplastic/mitochondrial 4343250 Os07g0485400 4.0 3.8
 4.3
 2.1
 2.8
1.8
 3.7
3.3
 2.6
1.9
 3.8
 2.0
2.0
 0.7
40 wsl4 white stripe leaf4 4329703 Os02g0565400 4.0 4.2
 3.8






41 LOC4336112 pentatricopeptide repeat-containing protein At3g63370, chloroplastic 4336112 Os04g0469400 4.0 2.7
 5.3
 1.9
 0.0
 0.4
 0.7
 1.4
0.0
42 LOC4324676 uncharacterized LOC4324676 4324676 Os01g0558800 4.0 4.0
 3.9
 5.8
 1.8
0.7
 5.1
4.1
 2.0
1.4
 4.6
 1.3
 2.0
43 LOC4346416 uncharacterized LOC4346416 4346416 4.0 3.4
 4.5






44 LOC4340542 uncharacterized LOC4340542 4340542 Os06g0225100 4.0 4.2
 3.7






45 LOC4326401 probable dual-specificity RNA methyltransferase RlmN 4326401 Os01g0973400 4.0 4.0
 4.0
 5.1
 2.5
2.0
 2.3
2.2
 2.9
2.2
 2.1
 3.1
 1.9
46 LOC4334445 probable GTP-binding protein OBGC2 4334445 OSNPB_030799700 4.0 3.2
 4.8
1.9
1.9
 4.3
3.2
 5.2
1.7
 0.5
 2.2
 2.2
47 LOC4324118 methionyl-tRNA formyltransferase 4324118 Os01g0687500 3.9 2.5
 5.4
 3.2
 2.3
 3.5
 3.6
 1.7
 1.0
 3.1
48 LOC9266673 proteinaceous RNase P 1, chloroplastic/mitochondrial-like 9266673 3.9 4.6
 3.3
 6.4
 0.7
-0.7
 1.4
1.1
 2.6
1.4
 2.3
 2.2
2.2
 3.2
49 LOC4338419 tRNA (guanine(26)-N(2))-dimethyltransferase 4338419 Os05g0324200 3.9 3.3
 4.5
 4.8
 1.1
 3.7
 1.6
 2.0
 4.7
 2.0
50 LOC4339764 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 4339764 Os05g0587200 3.9 3.6
 4.2
 4.0
 0.9
0.5
 1.9
1.8
 3.2
2.8
 3.7
 1.3
 1.8
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