Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4328404   pentatricopeptide repeat-containing protein At4g21065 
 osa-r.5   4328404   pentatricopeptide repeat-containing protein At4g21065 
 osa-m.8   4328404   pentatricopeptide repeat-containing protein At4g21065 
 gma-u.4   100798950   pentatricopeptide repeat-containing protein At4g21065 
 sly-u.4   101245194   pentatricopeptide repeat-containing protein At4g21065-like 
 mtr-u.4   120577581   pentatricopeptide repeat-containing protein At4g21065-like 

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Top 50 coexpressed genes to 4328404 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4136   Autophagy - other  2 41 2.47
 osa261   Monobactam biosynthesis  1 12 -
 osa300   Lysine biosynthesis  1 14 -
 osa240   Pyrimidine metabolism  1 63 -
 osa1230   Biosynthesis of amino acids  1 234 -

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osa:LOC4328404 (pentatricopeptide repeat-containing protein At4g21065) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4328404
osa-r.5
for
4328404
osa-m.8
for
4328404
gma-u.4
for
100798950
sly-u.4
for
101245194
mtr-u.4
for
120577581
1 LOC4334328 pentatricopeptide repeat-containing protein At5g14080 4334328 Os03g0782900 3.8 1.9
 5.7
 1.8
 3.6
 0.9
2 LOC4340190 disease resistance protein PIK6-NP-like 4340190 Os06g0158300 3.7 2.9
 4.4


3 LOC4335906 protein disulfide isomerase-like 1-2 4335906 OSNPB_040436300 3.6 2.9
 4.3
 0.9
0.7
 -0.2
-0.2
 0.5
4 LOC4345183 pentatricopeptide repeat-containing protein At4g19440, chloroplastic 4345183 Os08g0290000 3.6 1.7
 5.5


5 LOC9268688 uncharacterized LOC9268688 9268688 Os10g0203600 3.5 2.7
 4.3


6 LOC4351951 oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 4351951 Os12g0270100 3.5 3.6
 3.3
 4.3
 3.0
 3.5
7 LOC4338505 TATA box-binding protein-associated factor RNA polymerase I subunit B 4338505 Os05g0352700 3.3 2.2
 4.5
 0.6
 -0.9
-1.1
 2.4
1.5
8 LOC4339961 pentatricopeptide repeat-containing protein At5g16420, mitochondrial 4339961 Os06g0125300 3.3 2.1
 4.6
 1.4
0.7
 1.4
 1.2
9 LOC9267420 ubiquitin-like-conjugating enzyme ATG10 9267420 Os12g0506800 3.3 2.2
 4.4
 0.0
-1.2
 -0.8
 0.3
10 LOC4351313 pentatricopeptide repeat-containing protein At4g18840 4351313 Os12g0114400 3.3 2.0
 4.6
 4.2

11 LOC4329164 probable 28S rRNA (cytosine-C(5))-methyltransferase 4329164 Os02g0320100 3.3 2.9
 3.6
 -0.4
 1.9
 0.2
12 LOC4338342 WD repeat-containing protein 91 homolog 4338342 Os05g0299300 3.2 2.8
 3.7
 -0.2
-0.5
 0.8
 0.1
13 LOC4349007 protein Rf1, mitochondrial 4349007 Os10g0497300 3.2 2.6
 3.9


14 LOC4337439 putative threonine aspartase 4337439 Os04g0682500 3.2 2.4
 4.0
 -0.4
 -0.5
 -0.4
15 LOC4328092 autophagy protein 5-like 4328092 OSNPB_020117800 3.2 3.4
 3.0
 -1.4
-1.6
 0.0
 -0.5
16 LOC4345516 pentatricopeptide repeat-containing protein At5g12100, mitochondrial 4345516 Os08g0402600 3.2 2.0
 4.4


17 LOC4331958 protein CLT2, chloroplastic 4331958 Os03g0199000 3.2 3.0
 3.3
 0.3
-0.6
 1.1
 -0.4
18 LOC4351907 pentatricopeptide repeat-containing protein At5g27110 4351907 Os12g0256900 3.2 1.3
 5.1
 3.9
 1.0
19 LOC4338177 cyclin-A1-4-like 4338177 OSNPB_050237100 3.1 3.6
 2.7
 -0.2
-0.4
 0.4
 0.1
20 LOC4338098 pentatricopeptide repeat-containing protein At3g49170, chloroplastic 4338098 Os05g0212100 3.1 2.3
 3.9
 1.5
 2.6
 2.6
21 LOC4340311 putative thiamine biosynthesis oxidoreductase ThiO 4340311 Os06g0181400 3.1 0.9
 5.2
 0.2
 1.5
 -0.8
22 LOC9269712 ABC transporter A family member 7 9269712 Os09g0360900 3.0 1.5
 4.6
 0.6
-0.5
 1.0
-0.2
 0.1
0.1
23 LOC4329264 uncharacterized LOC4329264 4329264 3.0 1.9
 4.1


24 LOC4324869 uncharacterized LOC4324869 4324869 3.0 2.3
 3.7


25 LOC4344412 branchpoint-bridging protein 4344412 Os08g0100700 3.0 3.5
 2.5
 1.3
1.0
 2.4
 -0.3
26 LOC4334314 pentatricopeptide repeat-containing protein At4g21300 4334314 Os03g0781200 3.0 2.8
 3.1
 3.3
1.9
 1.6
 2.1
27 LOC4348962 putative pentatricopeptide repeat-containing protein At5g52630 4348962 Os10g0488900 3.0 1.8
 4.1


28 LOC4338708 preprotein translocase subunit SCY2, chloroplastic 4338708 Os05g0397700 3.0 2.4
 3.5
 0.4
 1.7
 0.9
29 LOC4352325 protein CLT2, chloroplastic 4352325 Os12g0511300 3.0 1.9
 4.0
 0.3
-0.6
 1.1
 -0.4
30 LOC4344413 uncharacterized LOC4344413 4344413 Os08g0100800 3.0 2.6
 3.3
 -0.3
-0.3
 0.3
0.1
 0.3
-0.1
31 LOC4337652 transcription factor IIIA 4337652 Os05g0121400 3.0 2.4
 3.5
 1.2
-0.2
 0.4
 0.4
0.1
32 LOC4342544 MMS19 nucleotide excision repair protein homolog 4342544 Os07g0177100 3.0 3.7
 2.2
 3.1
2.3
 2.8
 3.5
0.8
33 LOC9267457 tRNA:m(4)X modification enzyme TRM13-like 9267457 Os03g0833200 2.9 2.3
 3.6
 0.7
 1.0
 1.6
34 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 2.9 1.6
 4.3
 3.8
2.0
 2.4
35 LOC4336112 pentatricopeptide repeat-containing protein At3g63370, chloroplastic 4336112 Os04g0469400 2.9 2.9
 3.0
 3.4
 0.8
 1.4
36 LOC4328008 RNA-binding protein 48 4328008 Os02g0105000 2.9 1.2
 4.7
 -1.6
 1.6
 -0.6
37 LOC4329597 protein FAR1-RELATED SEQUENCE 7 4329597 Os02g0542200 2.9 1.5
 4.4


38 LOC4345325 pentatricopeptide repeat-containing protein At4g39530 4345325 Os08g0340900 2.9 1.1
 4.7
 3.4
 4.2
39 LOC4351584 pentatricopeptide repeat-containing protein At4g15720 4351584 Os12g0163600 2.9 1.7
 4.2

2.7
40 LOC4332231 probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4332231 OSNPB_030245100 2.9 4.2
 1.6
 2.4
0.4
 -0.2
 1.9
41 LOC4333582 7-methylguanosine phosphate-specific 5'-nucleotidase A 4333582 Os03g0648900 2.9 2.9
 2.8
 0.7
 -0.1
 -0.7
42 LOC4333215 putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial 4333215 Os03g0441400 2.9 3.9
3.0
 2.1
 2.8
43 LOC4334149 cleavage stimulation factor subunit 50 4334149 Os03g0754900 2.9 1.3
 4.5
 0.5
 0.8
 0.1
44 LOC4338281 peptide chain release factor 1 4338281 Os05g0277300 2.9 2.0
 3.8
 1.8
 -0.1
 0.0
45 LOC9266587 uncharacterized LOC9266587 9266587 Os08g0199000 2.9 2.3
 3.5


46 LOC4350640 uncharacterized LOC4350640 4350640 Os11g0532000 2.9 1.7
 4.1


47 LOC107275294 pentatricopeptide repeat-containing protein At4g02750 107275294 Os12g0289800 2.9 3.8



48 LOC4340604 DNA polymerase lambda-like 4340604 Os06g0237200 2.9 2.8
 2.9
 0.2
 1.1
 0.8
49 LOC4351841 uncharacterized LOC4351841 4351841 2.8 2.4
 3.3


50 LOC4328111 methyltransferase-like protein 23 4328111 Os02g0120300 2.8 1.6
 4.1
 0.9
 1.3
 0.7
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