Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4328507   nucleoid-associated protein At2g24020, chloroplastic 
 osa-r.5   4328507   nucleoid-associated protein At2g24020, chloroplastic 
 ath-u.4   AT4G30620   Putative BCR, YbaB family COG0718 
 ath-u.4   AT2G24020   Putative BCR, YbaB family COG0718 
 gma-u.4   100782796   nucleoid-associated protein At4g30620, chloroplastic 
 gma-u.4   100305795   uncharacterized LOC100305795 
 sly-u.4   101266487   nucleoid-associated protein At4g30620, chloroplastic-like 
 sly-u.4   101251012   nucleoid-associated protein At4g30620, chloroplastic 
 ppo-u.4   7489439   nucleoid-associated protein At2g24020, chloroplastic 
 mtr-u.4   25480982   nucleoid-associated protein At4g30620, chloroplastic 
 mtr-u.4   11442689   nucleoid-associated protein At4g30620, chloroplastic 

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Top 50 coexpressed genes to 4328507 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa970   Aminoacyl-tRNA biosynthesis  7 70 9.89
 osa860   Porphyrin metabolism  5 42 7.57
 osa1240   Biosynthesis of cofactors  5 233 3.89
 osa1230   Biosynthesis of amino acids  3 234 -
 osa3010   Ribosome  2 353 -

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osa:LOC4328507 (nucleoid-associated protein At2g24020, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4328507
osa-r.5
for
4328507
ath-u.4
for
AT4G30620
ath-u.4
for
AT2G24020
gma-u.4
for
100782796
gma-u.4
for
100305795
sly-u.4
for
101266487
sly-u.4
for
101251012
ppo-u.4
for
7489439
mtr-u.4
for
25480982
mtr-u.4
for
11442689
1 LOC4337539 photosynthetic NDH subunit of lumenal location 5, chloroplastic 4337539 Os05g0103200 5.4 7.4
 2.7
 6.1
 2.9
2.1
 4.2
3.4
 5.4
 1.8
 5.4
3.7
 2.0
 2.4
2 LOC4331268 uncharacterized LOC4331268 4331268 Os02g0833400 5.0 7.1
 4.4
 5.8
 4.9
4.5
 7.4
5.3
 4.0
 2.4
 3.6
2.7
 1.1
 1.7
3 LOC4344571 uncharacterized LOC4344571 4344571 Os08g0127600 4.8 6.3
 3.3
 4.2
 3.0
2.8
 4.3
3.8
 4.0
 2.1
 2.8
-0.1
 2.5
 2.1
4 LOC4339910 ruBisCO large subunit-binding protein subunit beta, chloroplastic 4339910 Os06g0114000 4.7 6.7
 5.4
2.8
 5.1
1.6
 2.6
1.7
 4.0
3.9
 4.5
2.8
 2.0
1.6
 4.1
3.3
 0.6
0.6
 2.6
1.6
5 LOC4332563 probable LL-diaminopimelate aminotransferase, chloroplastic 4332563 OSNPB_030299900 4.7 6.8
 2.0
-0.3
 4.1
-0.7
 3.0
1.7
 2.7
1.6
 3.4
-0.1
 3.1
-0.9
 1.8
-1.1
 1.6
-0.5
 0.5
-0.5
6 LOC4341205 protein DJ-1 homolog A 4341205 Os06g0531200 4.7 7.1
 0.2
-0.3
 0.9
-0.1
 1.0
0.6
 2.0
0.7
 2.2
 -0.4
 1.3
 -0.4
 0.2
7 LOC4351647 monothiol glutaredoxin-S12, chloroplastic-like 4351647 OSNPB_120175500 4.6 6.3
 2.6
 3.5
 3.5
2.8
 3.7
2.7
 2.7
 4.8
 3.3
 1.4
 2.5
8 LOC4330852 soluble inorganic pyrophosphatase 6, chloroplastic 4330852 Os02g0768600 4.5 6.5
 3.2
 4.9
 1.0
0.7
 3.0
1.8
 2.6
2.0
 1.0
1.0
 1.7
1.5
 1.4
 3.4
9 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 4.3 5.9
 3.6
 8.0
 4.3
3.6
 6.7
5.6
 5.9
 3.7
 2.8
 1.9
 4.2
10 LOC4327912 peptidyl-prolyl cis-trans isomerase A1 4327912 Os01g0284700 4.3 5.7
 3.1
 9.4
 3.2
2.8
 4.7
3.2

5.3
 1.3
1.0
 2.5
1.7
11 LOC4340044 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 4340044 Os06g0136800 4.3 5.7
 2.1
 6.4
 5.2
4.7
 5.2
4.2
 4.7
 4.6
 4.3
 1.3
 3.5
12 LOC4351989 protein RETICULATA-RELATED 1, chloroplastic 4351989 Os12g0283800 4.3 6.2
 1.5
 2.2
 4.2
2.6
 6.4
5.3
 2.6
1.5
 1.2
-0.3
 2.2
0.4
 1.6
 0.9
13 LOC4330964 uncharacterized LOC4330964 4330964 Os02g0788500 4.2 5.4
 3.3
 3.4
 1.7
-0.5
 2.8
-0.6
 1.8
 3.1
 4.7
1.8
 2.9
 2.9
14 LOC4329197 fruit protein pKIWI502 4329197 Os02g0328300 4.2 6.1
 1.3
 2.2
 1.9
0.6
 3.8
0.6
 4.4
 5.2
 3.7
0.1
 1.4
 1.0
15 LOC4328118 glutamate--tRNA ligase, chloroplastic/mitochondrial 4328118 Os02g0121000 4.2 5.5
 3.3
 3.3
 5.6
4.5
 6.9
5.9
 2.5
 1.2
 3.4
 2.7
 1.6
16 LOC4340846 trigger factor-like protein TIG, Chloroplastic 4340846 Os06g0308000 4.2 5.5
 4.5
 7.3
 2.6
2.2
 4.2
3.5
 5.2
 2.9
 4.1
 1.4
 3.7
17 LOC4341869 50S ribosomal protein L24, chloroplastic 4341869 Os06g0683200 4.2 5.5
 3.3
 8.7
 3.8
3.6
 6.8
5.6
 4.1
 5.1
 3.5
 2.4
 4.5
18 LOC4346136 glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 4346136 OSNPB_080532200 4.1 5.5
 3.2
2.1
 5.6
4.0
 3.8
3.1
 6.2
5.5
 3.4
 1.7
 6.0
 1.0
 2.6
19 LOC4335926 protein TIC 40, chloroplastic 4335926 Os04g0439900 4.1 6.0
 4.2
 4.2
 3.9
3.7
 4.0
3.3
 4.1
 1.2
 3.7
0.7
 1.6
 0.7
20 LOC4352460 nucleoside diphosphate kinase 2, chloroplastic 4352460 Os12g0548300 4.1 5.5
 4.7
 6.5
 2.1
1.7
 3.9
3.5
 4.3
2.9
 2.7
2.5
 4.9
 0.5
 2.5
21 LOC4333096 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 4333096 Os03g0411500 4.1 5.3
 2.0
 7.5
 4.1
2.5
 5.8
3.9
 4.7
 4.5
 7.0
1.7
 1.7
 2.7
22 LOC4340394 20 kDa chaperonin, chloroplastic 4340394 Os06g0197575 4.1 5.9
 4.2
 6.3
 3.5
3.1
 7.9
4.6
 4.2
3.4
 3.5
2.0
 4.8
2.8
 2.1
0.6
 2.6
2.0
23 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 4.0 5.4
 3.7
1.0
 4.4
0.9
 4.0
 6.3
 3.5
2.1
 2.6
1.7
 3.5
1.5
 1.0
 2.4
24 LOC4332615 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 4332615 Os03g0308100 4.0 5.4
 1.0
 3.1
 3.2
2.6
 4.8
3.6
 6.1
 5.1
 3.4
3.2
 3.8
2.4
 4.8
1.9
25 LOC4331034 P-loop guanosine triphosphatase YjiA 4331034 Os02g0800000 4.0 5.7
 4.3
2.2
 3.6
2.6
 3.4
1.5
 5.5
2.6
 3.5
 3.9
 3.3
 1.6
 2.0
26 LOC4350686 glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial-like 4350686 OSNPB_110544800 4.0 4.9
 2.8
 7.5
 2.3
2.1
 2.9
2.8
 3.8
 2.6
 2.7
 2.2
 2.4
27 LOC4350829 CDK5RAP1-like protein 4350829 OSNPB_110592800 4.0 5.9
 3.3
 4.1
 2.0
1.5
 2.8
2.8
 3.4
 1.4
 2.2
 2.9
 2.8
28 LOC4344492 uncharacterized LOC4344492 4344492 Os08g0112600 4.0 5.3
 5.2
 3.9
 2.6
 4.7
 2.4
 2.2
 2.5
 1.3
 4.5
29 LOC4329119 uncharacterized LOC4329119 4329119 Os02g0307800 4.0 5.1
 2.4
 3.8
 1.3
0.2
 2.4
0.2
 0.9
 2.3
 2.9
 0.4
0.1
 4.4
1.9
30 LOC4341789 14 kDa zinc-binding protein 4341789 Os06g0667500 3.9 5.2
 2.0
-0.7
 3.8
0.1
 2.1
-0.1
 3.6
0.7
 2.3
-0.5
 4.8
-1.2
 5.4
2.0
 1.4
-0.3
 3.4
1.0
31 LOC4345098 glutamyl-tRNA reductase-binding protein, chloroplastic 4345098 Os08g0254900 3.9 5.7
 2.6
 4.5
 3.1
 3.6
 3.2
 3.2
 5.3
 1.7
 1.5
32 LOC4349608 elongation factor P 4349608 Os11g0116400 3.9 4.9
 6.5
 7.0
 3.2
1.2
 5.0
2.0
 2.4
 1.8
 5.2
 1.5
 3.4
33 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 3.9 5.3
 3.6
1.1
 3.3
0.5
 1.5
1.2
 4.7
4.1
 2.8
0.2
 1.3
1.2
 4.1
3.0
 2.6
0.4
 2.7
1.7
34 LOC9269551 mitochondrial import inner membrane translocase subunit TIM22-3 9269551 Os10g0364700 3.9 5.4
 3.6
3.5
 1.3
0.9
 4.1
3.7
 5.1
5.1
 6.4
 4.0
 2.4
2.4
 1.5
 3.4
35 LOC4334537 magnesium-chelatase subunit ChlD, chloroplastic-like 4334537 OSNPB_030811100 3.9 5.2
 2.8
 4.1
 2.8
1.5
 3.5
2.7
 3.4
 1.3
 4.3
 1.7
 3.4
36 LOC4324505 aspartate--tRNA ligase, chloroplastic/mitochondrial 4324505 Os01g0153400 3.9 5.3
 3.5
 2.9
 2.7
1.9
 2.7
2.7
 2.5
 2.5
 4.0
1.6
 1.8
1.7
 1.5
1.2
37 LOC4333591 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial-like 4333591 OSNPB_030651000 3.9 5.0
 5.7
 3.8
 3.8
2.8
 5.5
4.9
 2.8
 3.0
 2.0
 1.2
 2.6
38 wsl6 white stripe leaf6 9271571 OSNPB_050567300 3.9 5.0
 4.7
 3.8
 3.6
0.6
 5.3
0.4
 3.1
 1.2
 5.1
 1.5
 1.8
39 LOC4332290 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 4332290 Os03g0255200 3.7 4.6
 2.5
 3.9
 4.3
 5.0
 4.7
 3.4
 2.8
 1.7
 2.1
40 LOC4332957 RNA-binding protein CP29B, chloroplastic 4332957 Os03g0376600 3.7 4.6
 4.6
2.9
 2.6
1.8
 2.0
1.9
 3.7
2.4
 6.8
4.9
 3.9
1.2
 5.0
3.2
 1.5
 5.1
41 LOC4336102 indole-3-glycerol phosphate synthase, chloroplastic 4336102 Os04g0467700 3.7 5.2
 3.4
-0.3
 2.9
1.1
 3.8
3.5
 4.0
3.5
 5.7
 4.0
 4.1
 1.4
 1.2
42 LOC4334251 cytochrome c biogenesis protein CCS1, chloroplastic-like 4334251 OSNPB_030769600 3.7 5.0
 3.3
 2.3
 2.3
 1.9
 3.1
 2.5
 2.3
 0.1
 5.0
43 LOC4328432 porphobilinogen deaminase, chloroplastic-like 4328432 OSNPB_020168800 3.7 4.7
 4.0
 4.9
 3.3
2.0
 5.2
4.0
 3.7
 2.8
 2.3
2.1
 1.5
 2.5
44 LOC4339677 ketol-acid reductoisomerase, chloroplastic-like 4339677 OSNPB_050573700 3.7 5.2
 1.4
 1.8
 -0.2
-0.8
 1.6
0.8
 3.2
-1.7
 0.0
-0.2
 0.9
0.6
 1.0
 0.7
45 LOC4325462 uncharacterized protein At2g39795, mitochondrial 4325462 Os01g0143800 3.7 4.7








46 LOC4326635 uroporphyrinogen decarboxylase 1, chloroplastic-like 4326635 OSNPB_010622300 3.7 5.3
 3.6
 3.4
 3.7
3.0
 5.4
4.5
 5.3
 2.5
 4.1
 1.1
 2.5
47 LOC4335708 glycine--tRNA ligase, mitochondrial 1 4335708 Os04g0398300 3.7 5.3
 -0.6
 0.2
 0.9
 0.8
 2.3
1.2
 2.2
-0.1
 1.7
-0.7
 0.7
0.5
 1.5
0.6
48 LOC4352408 phenylalanine--tRNA ligase, chloroplastic/mitochondrial 4352408 Os12g0533700 3.7 4.9
 3.4
 6.3
 2.9
1.3
 4.4
1.6
 4.5
 2.7
 2.0
 3.5
 3.0
49 WP1 white panicle1 4342467 Os07g0163500 3.6 5.0
 2.5
 3.4
 4.0
 4.8
 4.5
 1.8
 1.5
 3.7
 1.5
50 LOC4329578 2-Cys peroxiredoxin BAS1, chloroplastic-like 4329578 OSNPB_020537700 3.6 5.4
 2.5
1.9
 8.4
5.0
 4.1
2.2
 6.7
4.6
 5.1
1.8
 2.7
2.7
 4.2
3.7
 0.3
0.1
 3.3
2.9
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