Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4329335   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 osa-r.5   4329335   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 osa-m.8   4329335   pentatricopeptide repeat-containing protein At1g06140, mitochondrial 
 gma-u.4   100812822   pentatricopeptide repeat-containing protein At4g19191, mitochondrial 
 mtr-u.4   25496618   pentatricopeptide repeat-containing protein DOT4, chloroplastic 

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Top 50 coexpressed genes to 4329335 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3430   Mismatch repair  2 28 -
 osa310   Lysine degradation  1 36 -
 osa3440   Homologous recombination  1 55 -
 osa3018   RNA degradation  1 112 -
 osa3040   Spliceosome  2 196 -

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osa:LOC4329335 (pentatricopeptide repeat-containing protein At1g06140, mitochondrial) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4329335
osa-r.5
for
4329335
osa-m.8
for
4329335
gma-u.4
for
100812822
mtr-u.4
for
25496618
1 LOC4337496 uncharacterized protein DDB_G0287625 4337496 Os04g0690400 4.2 4.7
 3.8

2 LOC4336204 anaphase-promoting complex subunit 2 4336204 Os04g0484800 3.2 3.9
 2.5
 1.9
1.4
 1.9
1.8
3 LOC4334328 pentatricopeptide repeat-containing protein At5g14080 4334328 Os03g0782900 3.2 4.4
 1.9
 0.6
 0.3
4 LOC4329167 pentatricopeptide repeat-containing protein At1g09900 4329167 Os02g0321000 3.0 2.9
 3.1
2.3
5 LOC4325314 pentatricopeptide repeat-containing protein At3g54980, mitochondrial 4325314 Os01g0611900 2.9 2.5
 3.3

6 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 2.8 3.3
 2.4

7 LOC9271882 protein FAR1-RELATED SEQUENCE 5 9271882 Os07g0496300 2.8 3.5
 2.0

8 LOC112939658 putative disease resistance RPP13-like protein 1 112939658 Os07g0273900 2.6 4.2


9 LOC4325102 uncharacterized LOC4325102 4325102 Os01g0897100 2.6 2.4
 2.7
 2.5
 0.6
10 LOC4336394 pentatricopeptide repeat-containing protein At3g09040, mitochondrial 4336394 Os04g0514500 2.5 3.9
 1.1
 1.8
11 LOC4344730 pentatricopeptide repeat-containing protein At1g07590, mitochondrial 4344730 Os08g0162250 2.5 2.6
 2.3
 2.8
 1.0
12 LOC4334547 E3 ubiquitin-protein ligase SIRP1-like 4334547 Os03g0812200 2.5 2.5
 2.5

13 LOC4327226 uncharacterized LOC4327226 4327226 Os01g0924600 2.5 3.5
 1.4
 0.9
-0.0
 1.0
14 LOC4350865 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 4350865 Os11g0602200 2.5 2.6
 2.3

15 LOC4349978 DNA topoisomerase 2-binding protein 1-A 4349978 Os11g0191300 2.5 2.0
 2.9
 1.0
 1.4
0.6
16 LOC4336234 uncharacterized LOC4336234 4336234 2.5 2.7
 2.2
1.8
17 LOC4352808 serine/threonine-protein phosphatase BSL2 homolog 4352808 OSNPB_120617900 2.5 2.6
 2.4
 1.2
1.1
 0.6
0.1
18 LOC4344748 protein FAR1-RELATED SEQUENCE 5 4344748 Os08g0166400 2.4 2.6
 2.3

19 LOC4329835 DNA mismatch repair protein PMS1 4329835 Os02g0592300 2.4 1.3
 3.6
 1.3
1.1
 2.1
20 LOC4351289 regulatory-associated protein of TOR 1-like 4351289 Os12g0110050 2.4 2.4
 2.5
 0.6
-0.1
 0.9
21 LOC4338098 pentatricopeptide repeat-containing protein At3g49170, chloroplastic 4338098 Os05g0212100 2.4 2.5
 2.3
 2.2
 1.2
22 LOC4333362 DUF21 domain-containing protein At1g55930, chloroplastic 4333362 Os03g0593200 2.4 2.6
 2.2
 0.2
 -0.1
23 LOC4333330 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4333330 Os03g0582100 2.4 3.0
 1.9

24 LOC4340651 pentatricopeptide repeat-containing protein At3g61520, mitochondrial 4340651 Os06g0249500 2.4 0.8
 4.0
 1.9
 2.2
25 LOC4350336 uncharacterized LOC4350336 4350336 Os11g0303500 2.4 3.2
 1.6

26 LOC4345317 enhancer of polycomb-like protein 1 4345317 Os08g0338900 2.4 2.8
 2.0
 1.3
0.1
 0.5
27 LOC4328284 splicing factor 3B subunit 1 4328284 Os02g0146400 2.4 2.7
 2.1
 2.0
1.5
 2.1
28 LOC4331860 origin of replication complex subunit 2-like 4331860 Os03g0184700 2.4 2.6
 2.1
 0.7
 0.1
29 LOC4336555 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 4336555 Os04g0544100 2.4 2.3
 2.4
 0.9
0.7
 1.0
30 LOC4330371 protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 4330371 Os02g0689800 2.4 3.6
 1.1
 2.5
1.7
 2.2
31 LOC4347202 gamma-tubulin complex component 3 4347202 Os09g0446200 2.4 3.1
 1.6
 1.8
-0.5
 0.9
32 LOC4341106 nucleolar complex protein 3 homolog 4341106 Os06g0498500 2.4 2.8
 1.9
 2.5
2.5
 2.9
33 LOC4351132 disease resistance protein RGA5-like 4351132 Os11g0684100 2.3 2.4
 2.3

34 LOC4345759 uncharacterized LOC4345759 4345759 Os08g0459100 2.3 2.6
 2.1
 0.8
0.7
 1.1
0.3
35 LOC4343648 uncharacterized LOC4343648 4343648 Os07g0569000 2.3 2.7
 1.9
 -0.1
-0.2
 0.1
36 LOC4329761 transcription termination factor MTEF1, chloroplastic 4329761 Os02g0577501 2.3 3.7
 0.9
 1.3
0.9
 0.4
-0.9
37 LOC4328436 protein argonaute 17-like 4328436 OSNPB_020169400 2.3 2.1
 2.6

38 LOC4329300 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein 4329300 Os02g0461600 2.3 0.5
 4.1
 1.1
-0.0
 1.0
39 LOC4350856 DEAD-box ATP-dependent RNA helicase 52C 4350856 OSNPB_110599500 2.3 1.7
 2.9
 2.0
1.8
 0.9
0.4
40 LOC4347812 pentatricopeptide repeat-containing protein At2g22410, mitochondrial 4347812 Os09g0555400 2.3 1.3
 3.3
2.0
41 LOC4351244 uncharacterized LOC4351244 4351244 Os12g0102400 2.3 2.9
 1.7
 1.8
1.5
 1.5
0.2
42 LOC4334787 putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 4334787 Os03g0849700 2.3 2.7
 1.9
 1.9
 0.5
43 LOC4343567 uncharacterized LOC4343567 4343567 Os07g0555400 2.3 2.7
 1.8

44 LOC4339961 pentatricopeptide repeat-containing protein At5g16420, mitochondrial 4339961 Os06g0125300 2.3 2.4
 2.1
 0.1
-0.3
 0.5
45 LOC4346941 DEAD-box ATP-dependent RNA helicase 22-like 4346941 OSNPB_090383400 2.3 3.6
 0.9
 2.5
 3.3
46 LOC4329933 protein FAR1-RELATED SEQUENCE 6 4329933 Os02g0608100 2.3 3.7
 0.8

47 LOC4331725 protein FAR1-RELATED SEQUENCE 5 4331725 Os03g0164400 2.3 2.2
 2.3
 -0.6
 0.7
0.4
48 LOC4329053 putative pentatricopeptide repeat-containing protein At5g08490 4329053 Os02g0290000 2.3 3.4
 1.1
 2.7
 3.7
49 LOC4329542 pentatricopeptide repeat-containing protein At3g63370, chloroplastic 4329542 Os02g0529900 2.2 1.7
 2.8

50 LOC4337442 DNA mismatch repair protein MSH3 4337442 Os04g0682900



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