Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4330599   serine protease SPPA, chloroplastic 
 osa-r.5   4330599   serine protease SPPA, chloroplastic 
 osa-m.8   4330599   serine protease SPPA, chloroplastic 
 ath-u.4   SPPA   signal peptide peptidase 
 gma-u.4   100781522   serine protease SPPA, chloroplastic 
 gma-u.4   100809623   serine protease SPPA, chloroplastic 
 sly-u.4   101265322   serine protease SPPA, chloroplastic 
 ppo-u.4   7453871   serine protease SPPA, chloroplastic 
 mtr-u.4   11437695   serine protease SPPA, chloroplastic 
 mtr-u.4   11422310   serine protease SPPA, chloroplastic 

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Top 50 coexpressed genes to 4330599 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3060   Protein export  3 49 3.82
 osa260   Glycine, serine and threonine metabolism  2 64 2.09
 osa630   Glyoxylate and dicarboxylate metabolism  2 76 -
 osa195   Photosynthesis  2 77 -
 osa1200   Carbon metabolism  3 273 -

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osa:LOC4330599 (serine protease SPPA, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4330599
osa-r.5
for
4330599
osa-m.8
for
4330599
ath-u.4
for
SPPA
gma-u.4
for
100781522
gma-u.4
for
100809623
sly-u.4
for
101265322
ppo-u.4
for
7453871
mtr-u.4
for
11437695
mtr-u.4
for
11422310
1 LOC4331552 uncharacterized LOC4331552 4331552 Os03g0137600 5.4 5.7
 5.1
 3.1
 3.3
 -0.4
 2.2
 0.6
 -0.8
 0.8
2 LOC4351682 histone deacetylase 14 4351682 Os12g0182700 4.8 4.0
 5.6
 1.4
 2.8
 0.9
 1.8
 3.5
 0.6
 2.3
3 LOC4326261 DNA gyrase subunit B, chloroplastic/mitochondrial-like 4326261 OSNPB_010268300 4.8 5.2
 4.3
 3.3
1.9
 3.2
3.1
 1.3
-0.4
 2.5
 2.2
 -0.2
 1.5
4 LOC4339689 translation initiation factor IF-2, chloroplastic 4339689 Os05g0575300 4.7 3.8
 5.6
 3.3
 9.3
9.0
 -0.1
-0.5
 4.7
 3.1
1.0
 -1.3
 4.1
5 LOC4347153 uncharacterized LOC4347153 4347153 Os09g0436900 4.5 4.3
 4.7
 5.5
 5.2
 -0.0
 3.4
 3.5
 0.5
 4.0
6 LOC4330670 DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 4330670 Os02g0739000 4.5 3.0
 5.9
 2.2
 3.8
 1.7
 2.9
 1.9
 0.6
 1.6
7 LOC9267225 uncharacterized LOC9267225 9267225 Os01g0712600 4.4 6.0
7.5
 3.1
 -0.5
 3.6
 3.5
 -0.5
 1.9
8 LOC4343172 ABC transporter B family member 28 4343172 Os07g0464600 4.1 3.5
 4.7
 6.4
 2.0
 1.8
 2.3
 3.2
 1.5
 2.2
9 LOC4347913 probable anion transporter 4, chloroplastic 4347913 OSNPB_090570400 4.1 4.1
 4.1
 3.5
1.9
 4.1
4.0
 1.3
0.6
 4.2
4.0
 2.6
0.2
 1.6
0.3
 3.0
1.8
10 LOC4342680 zeta-carotene desaturase, chloroplastic/chromoplastic 4342680 Os07g0204900 4.1 3.1
 5.1
 5.0
 5.3
4.9
 1.3
1.1
 6.4
 2.3
1.3
 -0.2
 2.8
11 LOC4331854 15-cis-phytoene desaturase, chloroplastic/chromoplastic 4331854 OSNPB_030184000 4.1 4.2
 4.0
 5.2
 4.2
2.1
 0.5
-1.0
 3.5
 4.3
 1.8
 3.4
12 LOC4342210 glutamate--glyoxylate aminotransferase 2 4342210 Os07g0108300 4.0 4.3
 3.7
 3.2
1.7
 3.5
3.4
 -0.4
-0.6
 1.6
-0.0
 1.0
0.4
 1.7
 2.9
13 LOC4350828 GTPase HflX 4350828 Os11g0592700 4.0 4.4
 3.6
 4.1
 4.7
 0.3
 4.4
 2.8
 0.9
 2.1
14 LOC4346272 uncharacterized protein ycf39 4346272 Os08g0553800 4.0 3.0
 4.9
 4.6
 4.5
 0.5
 5.3
 2.0
0.7
 0.4
 1.9
15 LOC4346388 sodium/proton antiporter 1 4346388 Os09g0109800 3.9 4.1
 3.8
 1.7
 2.4
 0.1
 2.2
 1.0
0.8
 0.9
 1.1
16 LOC4349809 signal recognition particle 54 kDa protein, chloroplastic 4349809 Os11g0153700 3.9 3.7
 4.2
 2.9
 3.8
1.7
 1.4
0.4
 2.9
 3.0
1.2
 1.6
 2.7
17 LFNR1 ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic-like 4339874 OSNPB_060107700 3.9 2.6
 5.1
 1.5
1.2
 2.0
1.8
 1.5
1.1
 4.1
0.0
 -0.0
-0.1
 0.7
 0.1
18 LOC4335747 chaperone protein ClpD2, chloroplastic-like 4335747 OSNPB_040405000 3.9 5.1
2.4
 0.6
0.3
 0.6
0.5
 1.6
 2.4
1.5
 1.9
 0.8
19 LOC9271035 DNA topoisomerase 1 9271035 Os06g0281400 3.8 4.9
 2.7
 1.8
 4.0
3.1
 1.6
1.0
 2.8
 1.8
 -0.3
 2.3
20 LOC4343688 glutamyl-tRNA reductase-binding protein, chloroplastic 4343688 Os07g0573800 3.8 4.4
 3.2
 4.7
 3.5
1.7
 0.9
0.5
 2.7
 4.0
0.7
 2.3
 -0.1
21 LOC4344159 thioredoxin reductase NTRC-like 4344159 OSNPB_070657900 3.7 4.3
 3.1
 4.3
 5.7
4.4
 0.2
-1.1
 4.2
-0.2
 1.0
 0.8
 3.7
22 LOC4342386 cadmium-induced protein AS8 4342386 Os07g0143600 3.7 3.4
 4.1
 1.1
 1.4
 -0.2
 2.3
 -0.1
 -0.4
 1.0
23 LOC4334739 prolycopene isomerase 1, chloroplastic 4334739 Os03g0841900 3.7 3.2
 4.2
 5.8
 5.8
 0.1
 4.0
 1.0
 0.2
 1.9
24 LOC4350631 uncharacterized LOC4350631 4350631 Os11g0528500 3.7 3.4
 4.0
 2.6
 3.0
2.2
 0.2
-1.3
 4.2
 1.6
 -0.9
 1.5
25 LOC4337051 aminomethyltransferase, mitochondrial 4337051 Os04g0623800 3.7 3.2
 4.1
 2.1
 1.9
1.5
 -0.2
-0.6
 2.3
 -0.5
-1.4
 0.5
 1.1
26 LOC4337267 ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 4337267 Os04g0658300 3.7 3.4
 3.9
 2.4
 4.9
 2.5
 4.6
 1.3
 0.6
 3.5
27 LOC4326617 ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial-like 4326617 OSNPB_010618800 3.7 3.4
 3.9
 3.2
 5.4
3.8
 1.3
0.7
 2.7
 2.8
2.3
 1.1
 1.2
28 LOC4336064 uncharacterized LOC4336064 4336064 Os04g0462300 3.6 3.5
 3.8
 2.5
 8.1
2.3
 -0.9
-1.0
 1.9
 1.8
 0.1
 2.3
29 LOC4331237 tricalbin-3 4331237 Os02g0829200 3.6 3.7
 3.4
 2.6
1.6
 2.4
1.9
 -0.6
-1.3
 1.7
 2.3
1.0
 -0.3
 1.7
30 LOC4336633 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 4336633 Os04g0557000 3.6 3.2
 3.9






31 LOC4343366 ATP synthase subunit gamma, chloroplastic 4343366 Os07g0513000 3.5 3.0
 4.1
 0.1
 2.9
2.8
 0.1
-0.2
 1.5
 -0.5
-0.7
 0.2
 0.6
32 LOC4324118 methionyl-tRNA formyltransferase 4324118 Os01g0687500 3.5 3.9
 3.2
 1.2
 1.9
 0.3
 2.6
 0.4
 0.4
 3.0
33 LOC9271497 uncharacterized LOC9271497 9271497 Os07g0243150 3.5 4.2
 2.9
 2.0
 1.8
1.3
 -0.6
-1.7
 2.3
 0.5
0.2
 -0.8
-0.9
 2.2
1.3
34 LOC4346508 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like 4346508 OSNPB_090249900 3.5 1.9
 5.1
 2.1
 2.0
1.6
 0.9
-0.6
 4.3
 0.0
 -0.9
 1.3
35 LOC4324524 inner membrane protein PPF-1, chloroplastic 4324524 Os01g0151200 3.5 2.9
 4.0
 2.6
 4.5
3.6
 0.7
0.4
 4.2
 1.4
1.2
 0.9
 2.7
36 LOC4352523 pentatricopeptide repeat-containing protein At2g31400, chloroplastic 4352523 Os12g0562300 3.4 3.3
 3.5
 1.9
 3.3
2.5
 0.9
-0.1
 4.1
 2.0
0.6
 -0.5
-0.9
 1.0
0.0
37 LOC4327279 protein translocase subunit SECA1, chloroplastic 4327279 Os01g0321300 3.4 3.9
 3.0
 3.5
 4.9
3.3
 2.5
0.8
 4.0
 3.5
 -1.0
 3.0
38 LOC4345298 uncharacterized LOC4345298 4345298 Os08g0332700 3.4 4.2
 2.6
 3.7
 5.4
 1.6
 1.3
 1.7
1.0
 0.9
 2.2
39 LOC9271427 ACT domain-containing protein DS12, chloroplastic 9271427 OSNPB_080242700 3.4 3.2
 3.6
 1.1
 3.4
2.5
 1.7
1.3
 1.8
0.8
 1.6
1.5
 0.5
-1.8
 1.0
0.6
40 LOC4329186 uncharacterized LOC4329186 4329186 Os02g0326000 3.4 3.0
 3.7
 1.2
 2.1
 0.7
 1.2
 1.2
 0.3
 2.0
41 LOC4329941 outer envelope pore protein 37, chloroplastic 4329941 Os02g0608900 3.3 1.7
 4.9
 0.2
 3.3
 -0.8
 2.8
 2.8
0.6
 2.0
 1.1
42 LOC4352264 NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 4352264 Os12g0498500 3.3 2.9
 3.8
 0.7
 2.0
0.9
 -0.3
-0.6
 2.1
 0.2
 -0.4
 0.9
43 LOC4330582 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 4330582 Os02g0725200 3.3 2.9
 3.7
 3.5
 4.1
 0.1
 2.5
 2.4
 0.2
 4.2
44 LOC4328186 uncharacterized LOC4328186 4328186 Os02g0129900 3.3 2.8
 3.8
 3.0
 2.3
 -0.7
 1.9
 -0.2
 1.0
 0.9
45 LOC4325481 protein root UVB sensitive 5 4325481 Os01g0141600 3.3 3.0
 3.6
 2.9
 2.5
1.3
 2.3
1.6
 1.1
 2.1
 0.3
 3.2
46 SNAT1 serotonin N-acetyltransferase 1, chloroplastic-like 4339123 OSNPB_050481000 3.3 2.4
 4.2
 2.0
 1.8
 0.1
 2.6
 2.9
2.3
 -0.6
 2.8
47 LOC4348211 alanine--tRNA ligase 4348211 Os10g0182000 3.3 3.4
 3.2
 2.2
 0.8
-0.0
 1.1
0.2
 1.2
 0.7
 -0.3
 -0.5
48 LOC4346332 malate dehydrogenase [NADP], chloroplastic 4346332 Os08g0562100 3.3 2.4
 4.1
 3.1
 5.5
4.0
 0.6
0.1
 2.4
1.0
 0.9
 -0.3
 1.3
49 LOC4339227 scopoletin glucosyltransferase 4339227 Os05g0500000 3.3 4.0







50 LOC4325812 acyltransferase-like protein At1g54570, chloroplastic 4325812 Os01g0362100 3.3 3.7
 2.8
 2.7
0.9
 5.1
4.1
 1.2
0.7
 3.2
0.8
 3.8
2.4
 1.6
1.4
 3.5
1.5
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