Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4330852   soluble inorganic pyrophosphatase 6, chloroplastic 
 osa-r.5   4330852   soluble inorganic pyrophosphatase 6, chloroplastic 
 osa-m.8   4330852   soluble inorganic pyrophosphatase 6, chloroplastic 
 ath-u.4   PPa6   pyrophosphorylase 6 
 gma-u.4   100798544   soluble inorganic pyrophosphatase 6, chloroplastic 
 gma-u.4   100787109   soluble inorganic pyrophosphatase 1, chloroplastic-like 
 sly-u.4   101253833   soluble inorganic pyrophosphatase 6, chloroplastic 
 sly-u.4   101264469   soluble inorganic pyrophosphatase 6, chloroplastic 
 ppo-u.4   7478768   soluble inorganic pyrophosphatase 6, chloroplastic 
 ppo-u.4   7470779   soluble inorganic pyrophosphatase 6, chloroplastic 
 mtr-u.4   11425147   soluble inorganic pyrophosphatase 6, chloroplastic 

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Top 50 coexpressed genes to 4330852 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa1230   Biosynthesis of amino acids  10 220 10.55
 osa1240   Biosynthesis of cofactors  7 233 6.25
 osa860   Porphyrin metabolism  6 42 9.50
 osa970   Aminoacyl-tRNA biosynthesis  4 70 4.84
 osa3010   Ribosome  4 336 2.27

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osa:LOC4330852 (soluble inorganic pyrophosphatase 6, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4330852
osa-r.5
for
4330852
osa-m.8
for
4330852
ath-u.4
for
PPa6
gma-u.4
for
100798544
gma-u.4
for
100787109
sly-u.4
for
101253833
sly-u.4
for
101264469
ppo-u.4
for
7478768
ppo-u.4
for
7470779
mtr-u.4
for
11425147
1 LOC4337539 photosynthetic NDH subunit of lumenal location 5, chloroplastic 4337539 Os05g0103200 7.9 8.4
 7.3
 8.1
 3.7
2.7
 3.5
2.1
 6.0
 2.1
 5.9
5.7
 4.4
2.2
 3.5
2 LOC4340044 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic 4340044 Os06g0136800 6.5 7.3
 5.8
 3.2
 3.1
3.0
 4.4
3.3
 2.6
 2.8
 2.8
 1.8
 2.0
3 LOC4332771 uroporphyrinogen decarboxylase 2, chloroplastic-like 4332771 OSNPB_030337600 6.3 8.3
 4.3
 3.3
 2.9
2.6
 3.9
3.5
 2.8
 1.4
 3.8
2.2
 3.4
2.9
 2.1
4 LOC4332563 probable LL-diaminopimelate aminotransferase, chloroplastic 4332563 OSNPB_030299900 5.7 6.5
 4.8
 5.7
0.1
 3.3
2.9
 1.4
0.9
 4.1
0.5
 3.9
0.9
 2.9
-1.0
 1.8
-0.6
 3.9
-1.3
5 LOC4339677 ketol-acid reductoisomerase, chloroplastic-like 4339677 OSNPB_050573700 5.6 7.2
 4.0
 3.7
 1.6
0.9
 1.0
0.2
 3.5
-1.8
 3.3
3.1
 1.8
0.5
 2.5
1.9
 -1.2
6 LOC9269534 ribosome-binding ATPase YchF 9269534 Os03g0781000 5.5 5.3
 5.7
 6.8
 0.7
 2.7
 4.2
 2.9
 3.2
 2.6
 3.6
7 LOC4352651 aspartic proteinase nepenthesin-1 4352651 Os12g0583400 5.3 6.2
 4.3







8 LOC4337823 pyridoxal phosphate homeostasis protein 4337823 Os05g0150000 5.2 5.5
 5.0
 1.9
1.4
 1.7
1.4
 4.4
3.5
 0.4
0.3
 0.6
0.6
 2.2
 3.1
 2.2
-0.9
9 LOC4324282 histidinol dehydrogenase, chloroplastic-like 4324282 OSNPB_010232700 5.2 5.8
 4.6
 6.3
 3.3
1.8
 2.2
1.0
 3.9
 2.3
 3.1
1.2
 1.7
1.5
 2.0
10 LOC4331530 ATP phosphoribosyltransferase, chloroplastic-like 4331530 OSNPB_030134300 5.2 6.0
 4.3
 4.5
1.3
 3.3
2.7
 0.4
-0.2
 4.1
 1.2
 2.5
2.1
 2.3
1.6
 3.3
-0.3
11 LOC4334537 magnesium-chelatase subunit ChlD, chloroplastic-like 4334537 OSNPB_030811100 5.2 5.5
 4.8
 1.2
 1.7
1.0
 1.7
0.9
 3.4
 2.3
 3.3
 3.1
 1.6
12 LOC9270356 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic 9270356 Os04g0507800 5.2 5.0
 5.3
 2.2
 0.3
0.0
 2.8
1.1
 0.1
 2.5
 1.8
 2.0
 1.3
13 LOC4328432 porphobilinogen deaminase, chloroplastic-like 4328432 OSNPB_020168800 5.1 6.0
 4.2
 3.2
 3.7
2.1
 6.0
3.3
 0.4
 2.5
 2.1
0.4
 2.5
0.3
 2.2
14 LOC4324565 peptide deformylase 1A, chloroplastic-like 4324565 OSNPB_010555800 5.0 4.4
 5.5
 5.1
 1.4
 2.6
 2.8
 3.2
 6.0
 3.1
 2.9
1.0
15 LOC4337829 bifunctional protein FolD 2 4337829 Os05g0150800 5.0 5.2
 4.7
 0.5
 2.5
0.9
 1.0
0.3
 3.3
 1.2
 1.2
1.2
 2.4
1.9
 2.9
16 LOC4328139 NADP-dependent D-sorbitol-6-phosphate dehydrogenase 4328139 Os02g0123500 4.9 5.9
 4.0
 1.9
0.6
 2.1
 0.1
 0.7
 1.8
 4.2
 2.7
 3.2
17 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 4.9 5.4
 4.4
 3.5
 3.9
3.7
 4.4
4.3
 3.6
 1.6
 2.8
 1.9
 2.5
18 LOC4350686 glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial-like 4350686 OSNPB_110544800 4.9 6.8
 3.1
 4.0
 2.2
2.1
 2.3
1.4
 3.4
 1.8
 1.7
 1.2
 2.9
19 LOC4335708 glycine--tRNA ligase, mitochondrial 1 4335708 Os04g0398300 4.9 6.4
 3.4
 2.3
 1.2
 1.3
 2.6
0.7
 1.0
0.4
 1.8
1.4
 1.5
1.4
 2.2
0.1
20 LOC4324458 thioredoxin Y, chloroplastic-like 4324458 OSNPB_010963400 4.9 4.6
 5.2
 4.9
0.4
 2.5
1.5
 3.1
0.4
 3.4
 0.6
 1.2
1.2
 1.9
1.7
 3.4
21 LOC4351647 monothiol glutaredoxin-S12, chloroplastic-like 4351647 OSNPB_120175500 4.9 6.3
 3.5
 3.2
 3.0
2.1
 4.1
2.7
 1.3
 2.0
 2.0
 2.8
 4.8
22 LOC4330763 50S ribosomal protein L29, chloroplastic 4330763 Os02g0754300 4.9 5.2
 4.6
 2.9
 3.1
2.1
 4.0
3.8
 4.2
2.4
 2.4
2.2
 2.9
1.0
 2.0
0.3
 2.1
23 LOC4336951 oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 4336951 OSNPB_040610800 4.9 5.5
 4.2
 3.3
 4.2
 4.3
 2.2
 2.0
 1.2
 1.1
 1.6
24 LOC4352460 nucleoside diphosphate kinase 2, chloroplastic 4352460 Os12g0548300 4.9 6.0
 3.7
 5.7
 3.8
3.3
 3.5
1.9
 3.8
3.8
 2.9
1.3
 5.4
 2.5
 1.5
25 LOC4332596 argininosuccinate lyase, chloroplastic 4332596 Os03g0305500 4.9 6.0
 3.7
 4.1
 1.0
0.2
 -0.3
-0.5
 3.2
 1.1
 0.2
 0.7
 2.6
26 LOC4324261 histidine biosynthesis bifunctional protein hisIE, chloroplastic 4324261 Os01g0276500 4.8 4.7
 5.0
 2.8
 1.4
 -0.7
 2.3
 1.1
 1.3
 2.2
 3.3
27 LOC4330192 3-isopropylmalate dehydratase small subunit 3 4330192 Os02g0655300 4.8 5.0
 4.7
 3.4
3.2
 2.9
1.4
 2.4
1.1
 1.4
 1.2
 5.2
 1.7
 0.7
28 LOC4346927 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 4346927 Os09g0380200 4.8 5.5
 4.0
 1.9
 4.0
3.8
 4.6
4.5
 1.7
 2.4
 3.3
 3.5
 0.8
29 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 4.7 5.9
 3.6
 2.5
 2.5
1.4
 3.8
2.3
 4.0
 2.3
 4.0
 4.3
 3.5
30 LOC4328196 probable ATP synthase 24 kDa subunit, mitochondrial 4328196 Os02g0131300 4.7 5.6
 3.8
 3.5
 2.6
2.2
 1.4
1.2
 2.2
 1.0
 1.8
0.9
 3.6
1.9
 1.6
31 LOC4335424 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 4335424 Os04g0303900 4.7 5.3
 4.0
 4.1
 3.2
3.0
 2.7
2.5
 2.9
 1.5
 2.6
 2.0
 2.7
32 LOC4328118 glutamate--tRNA ligase, chloroplastic/mitochondrial 4328118 Os02g0121000 4.7 6.4
 3.0
 2.8
 4.2
2.8
 4.5
2.7
 2.9
 2.8
 2.8
 2.7
 0.8
33 LOC9269231 ornithine carbamoyltransferase, chloroplastic 9269231 Os02g0704800 4.6 4.7
 4.6
 4.1
 4.0
1.8
 2.1
0.5
 1.4
1.0
 2.8
2.3
 3.8
 1.8
 2.0
1.0
34 LOC4347854 mitochondrial amidoxime reducing component 2 4347854 Os09g0560800 4.6 5.7
 3.5
 8.2
0.6
 0.4
-0.1
 1.2
0.4
 -0.7
 0.1
 0.7
 0.7
 -0.1
-1.2
35 LOC4327912 peptidyl-prolyl cis-trans isomerase A1 4327912 Os01g0284700 4.6 5.7
 3.4
 6.9
 3.8
1.0
 3.5
3.0

2.2
 1.2
 3.4
1.9
36 LOC4325465 thylakoid lumenal 15 kDa protein 1, chloroplastic 4325465 Os01g0144100 4.6 4.4
 4.7
 0.3
 1.8
0.4
 1.8
1.2
 1.1
 1.5
 1.5
0.1
 1.2
0.4
 0.2
37 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 4.5 5.2
 3.8
 3.1
 2.3
 4.0
 4.2
0.9
 3.6
2.7
 4.5
4.0
 2.6
0.9
 3.1
38 LOC4328507 nucleoid-associated protein At2g24020, chloroplastic 4328507 Os02g0180200 4.5 6.5
4.9
3.2
 1.8
1.0
 3.0
0.7
 2.6
1.0
 2.0
1.0
 1.5
 1.7
 3.4
1.4
39 LOC4325651 threonine synthase, chloroplastic 4325651 Os01g0693800 4.5 5.1
 3.9
 2.2
-0.4
 2.0
1.6
 1.6
0.7
 4.0
3.3
 4.3
3.4
 1.3
0.0
 2.3
-0.6
 1.0
-0.2
40 LOC4330076 bifunctional nitrilase/nitrile hydratase NIT4-like 4330076 Os02g0635000 4.5 4.2
 4.7
 1.5
 2.3
2.0
 3.9
2.2
 1.5
 0.6
 1.7
 1.2
 -0.7
41 LOC4339546 ATP synthase subunit beta, mitochondrial-like 4339546 OSNPB_050553000 4.5 4.7
 4.3
 2.9
1.6
 2.3
1.8
 0.5
0.4
 1.0
0.4
 1.1
0.8
 3.5
2.3
 0.6
0.5
 0.5
-1.3
42 LOC4339910 ruBisCO large subunit-binding protein subunit beta, chloroplastic 4339910 Os06g0114000 4.5 6.2
 2.8
 4.5
3.9
 3.9
3.7
 5.1
4.2
 4.2
1.1
 3.3
1.7
 2.9
2.7
 3.0
2.6
 2.0
1.3
43 LOC4352303 upstream activation factor subunit spp27 4352303 Os12g0507500 4.4 3.2
 5.6
 1.6
1.3
 2.1
0.4
 4.2
1.5
 3.4
0.5
 2.3
1.9
 4.2
2.3
 1.7
0.5
 3.1
2.0
44 LOC4342210 glutamate--glyoxylate aminotransferase 2 4342210 Os07g0108300 4.4 4.8
 4.0
 1.5
1.4
 2.4
0.7
 2.7
2.5
 4.1
0.6
 1.0
-0.1
 2.7
1.8
 2.8
2.0
 4.0
45 LOC4341205 protein DJ-1 homolog A 4341205 Os06g0531200 4.4 6.1
 2.7
 0.5
-0.0
 2.4
2.4
 1.8
1.0
 4.0
 2.1
 1.4
 0.8
 1.1
46 LOC4344370 uncharacterized LOC4344370 4344370 Os07g0691200 4.4 3.9
 4.9
 -0.8
 -0.5
-0.5
 0.4
-0.3
 -0.2
 0.5
 -0.0
 -1.4
 -0.7
47 LOC4343584 protein THYLAKOID FORMATION1, chloroplastic-like 4343584 OSNPB_070558500 4.4 5.6
 3.2
 2.9
 4.2
2.1
 3.3
2.1
 3.6
 2.7
 1.8
-0.2
 2.2
-0.9
 2.5
1.0
48 LOC4352408 phenylalanine--tRNA ligase, chloroplastic/mitochondrial 4352408 Os12g0533700 4.3 6.6
 2.0
 4.5
 3.6
2.5
 3.1
1.8
 3.6
 1.8
 1.7
 2.0
 4.5
49 LOC4351381 bifunctional aspartokinase/homoserine dehydrogenase 1 4351381 Os12g0125400 4.3 5.9
 2.6
 2.6
 2.0
 -0.2
 1.6
 0.0
 1.0
 0.5
 2.1
50 LOC4346136 glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 4346136 OSNPB_080532200 4.2 4.9
 3.5
 4.5
4.2
 4.1
1.9
 3.6
3.2
 4.0
 1.9
 2.4
 2.3
 3.5
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