Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4331815   ylmG homolog protein 2, chloroplastic 
 osa-r.5   4331815   ylmG homolog protein 2, chloroplastic 
 osa-m.8   4331815   ylmG homolog protein 2, chloroplastic 
 ath-u.4   YLMG2   YGGT family protein 
 gma-u.4   100802756   ylmG homolog protein 2, chloroplastic 
 gma-u.4   100791676   uncharacterized LOC100791676 
 sly-u.4   101267629   ylmG homolog protein 2, chloroplastic 
 ppo-u.4   7492292   ylmG homolog protein 2, chloroplastic 
 mtr-u.4   11442240   ylmG homolog protein 2, chloroplastic 

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Top 50 coexpressed genes to 4331815 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  17 336 18.81
 osa195   Photosynthesis  3 76 3.26
 osa860   Porphyrin metabolism  1 42 -
 osa4146   Peroxisome  1 92 -

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osa:LOC4331815 (ylmG homolog protein 2, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4331815
osa-r.5
for
4331815
osa-m.8
for
4331815
ath-u.4
for
YLMG2
gma-u.4
for
100802756
gma-u.4
for
100791676
sly-u.4
for
101267629
ppo-u.4
for
7492292
mtr-u.4
for
11442240
1 LOC4334100 photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 4334100 Os03g0747700 7.6 6.0
 9.2
 1.8
 1.4
0.7
 1.6
1.0
 3.6
 1.0
 2.1
2 LOC4334749 30S ribosomal protein S6 alpha, chloroplastic 4334749 Os03g0843400 7.4 7.6
 7.3
 7.9
 6.9
6.4
 8.2
7.0
 4.6
 5.2
 2.6
3 LOC4340929 uncharacterized LOC4340929 4340929 Os06g0332800 7.0 7.0
 7.0
 4.7
 4.4
3.1
 4.5
3.8
 3.0
 3.6
1.9
 1.7
4 LOC4331127 28 kDa ribonucleoprotein, chloroplastic 4331127 Os02g0815200 6.7 5.4
 8.1
 1.7
 1.3
0.8
 4.5
2.7
 0.5
 4.6
2.5
 2.0
5 LOC4331942 30S ribosomal protein S10, chloroplastic 4331942 Os03g0196800 6.7 6.6
 6.7





6 LOC4333746 ferredoxin C 2, chloroplastic 4333746 Os03g0685000 6.7 6.6
 6.7
 4.9
 2.3
1.8
 2.1
1.8
 4.8
 1.5
 4.2
7 LOC4346294 28 kDa ribonucleoprotein, chloroplastic 4346294 Os08g0557100 6.6 5.7
 7.4
 5.7
3.6
 6.6
5.6
 7.6
6.2
 5.1
 2.7
2.3
 3.9
2.2
8 LOC4338460 uncharacterized LOC4338460 4338460 Os05g0337400 6.4 5.8
 7.0
 5.8
 5.7
4.6
 4.4
4.0
 6.9
 4.0
 2.2
9 wgl2 white green leaf2 4334247 Os03g0769100 6.4 6.2
 6.6
 6.1
 4.5
2.8
 5.6
4.2
 3.3
 4.6
2.6
 4.6
10 LOC4332348 50S ribosomal protein L4, chloroplastic 4332348 Os03g0265400 6.4 7.9
 4.9
 5.6
 4.6
2.6
 6.3
3.7
 4.6
 4.1
 2.3
11 LOC4340015 magnesium protoporphyrin IX methyltransferase, chloroplastic 4340015 Os06g0132400 6.3 3.6
 9.0
 3.3
 4.0
2.8
 7.2
5.5
 3.7
 2.9
 2.7
12 LOC4327541 50S ribosomal protein L34, chloroplastic 4327541 Os01g0805000 6.3 6.5
 6.0
 7.1
 5.5
4.8
 6.5
6.0
 7.0
 4.8
 6.1
13 LOC4334555 50S ribosomal protein L17, chloroplastic 4334555 Os03g0815400 6.3 6.4
 6.1
 6.5
 5.6
4.8
 5.6
5.2
 6.0
3.7
 4.5
1.9
 4.8
14 LOC4337506 30S ribosomal protein S17, chloroplastic-like 4337506 Os04g0691600 6.2 4.9
 7.4
5.0
4.2
 6.6
5.7
 6.7
 2.8
 4.2
15 LOC4332466 50S ribosomal protein L10, chloroplastic 4332466 Os03g0284400 6.0 5.3
 6.7
 4.6
 3.2
 3.1
 5.1
 3.9
2.5
 4.6
16 LOC4331459 50S ribosomal protein L5, chloroplastic-like 4331459 OSNPB_030125000 6.0 5.5
 6.4
 6.3
 4.3
2.4
 5.7
5.0
 4.5
 2.9
0.9
 4.9
17 LOC4338005 30S ribosomal protein S31, chloroplastic 4338005 Os05g0186000 5.9 5.5
 6.3
 6.2
 4.7
4.3
 4.9
4.5
 6.5
 4.3
 8.2
18 LOC4332730 uncharacterized LOC4332730 4332730 Os03g0331600 5.9 5.9
 5.8
 5.4
 5.7
5.6
 8.4
5.9
 7.4
 5.9
 3.8
19 LOC4331439 nascent polypeptide-associated complex subunit alpha-like protein 1 4331439 Os03g0121700 5.8 5.0
 6.6
 1.2
1.2
 1.4
1.3
 1.0
0.6
 0.9
-1.4
 1.4
0.4
 2.1
1.1
20 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 5.8 5.5
 6.2
 6.0
1.7
 4.2
 4.5
 5.0
4.4
 3.7
3.2
 3.7
21 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 5.8 5.3
 6.4
 1.4
 3.0
0.4
 3.6
-1.1
 2.6
 1.5
 1.2
22 LOC4327627 protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic-like 4327627 OSNPB_010798500 5.8 4.8
 6.7
 2.7
 3.2
1.5
 3.9
3.3
 3.8
 1.8
 4.6
23 LOC4332089 50S ribosomal protein L15, chloroplastic 4332089 Os03g0219900 5.7 6.0
 5.4
 6.3
 4.5
 4.8
 4.6
 3.1
-0.3
 3.9
24 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 5.6 6.4
 4.7
 7.4
 5.3
3.9
 4.8
4.8
 5.6
 2.7
 5.8
25 LOC4324908 rhodanese-like domain-containing protein 4A, chloroplastic 4324908 Os01g0889800 5.5 6.5
 4.5
 3.0
 5.5
4.2
 3.8
2.8
 3.3
 5.4
 3.5
26 LOC4329578 2-Cys peroxiredoxin BAS1, chloroplastic-like 4329578 OSNPB_020537700 5.5 6.0
 5.0
 6.5
4.1
 4.5
4.0
 5.6
4.5
 5.5
0.1
 2.9
2.8
 4.6
2.2
27 LOC4331442 50S ribosomal protein L11 4331442 Os03g0122200 5.4 3.7
 7.2
 6.8
 2.6
 4.5
 4.6
 2.6
1.6
 5.9
28 LOC4339930 uncharacterized LOC4339930 4339930 Os06g0116400 5.4 4.3
 6.4
 1.2
0.5
 4.6
2.0
 5.2
2.3
 3.1
0.0
 2.7
1.4
 2.2
29 LOC4331057 uncharacterized LOC4331057 4331057 Os02g0804400 5.4 3.7
 7.0
 2.0
 1.8
 1.7
 3.7
 2.9
 1.3
30 LOC4330746 photosynthetic NDH subunit of lumenal location 4, chloroplastic 4330746 Os02g0751600 5.3 5.9
 4.7
 3.2
 3.1
 2.6
5.0
 3.4
31 LOC4341766 peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic 4341766 Os06g0663800 5.3 4.0
 6.7
 4.1
 1.4
 0.7
 4.7
 3.7
 3.1
32 LOC4324472 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 4324472 Os01g0966200 5.3 4.1
 6.4
 2.8
 3.7
1.8
 4.1
3.5
 4.1
 1.7
 3.0
33 LOC4352538 psbP domain-containing protein 1, chloroplastic 4352538 Os12g0564400 5.3 5.0
 5.5
 4.2
 3.6
 1.8
 3.8
 3.3
1.2
 1.4
34 LOC4343402 protein LHCP TRANSLOCATION DEFECT 4343402 OSNPB_070520800 5.3 3.1
 7.4
 7.5
 3.5
2.8
 3.4
2.6
 3.2
 3.1
 4.1
35 LOC4331249 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 4331249 Os02g0831200 5.2 5.1
 5.3
 1.7
 2.7
 3.1
 1.0
 0.8
 1.5
36 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 5.2 5.3
 5.1
 3.4
 6.2
5.8
 5.1
4.8
 3.0
 4.1
1.9
 5.1
37 LOC4333848 30S ribosomal protein S13, chloroplastic 4333848 Os03g0704000 5.2 6.4
 4.0
 6.6
 3.5
2.6
 3.6
3.2
 6.1
 3.8
2.9
 3.0
38 LOC4333624 ferredoxin C 1, chloroplastic 4333624 Os03g0659200 5.2 5.8
 4.6
3.9
2.2
 4.9
2.2
 3.7
 3.5
2.0
 4.1
39 LOC4347871 28 kDa ribonucleoprotein, chloroplastic 4347871 Os09g0565200 5.2 4.1
 6.2
 5.7
3.6
 6.6
5.6
 7.6
6.2
 5.1
 2.7
2.3
 3.9
2.2
40 LOC4339922 superoxide dismutase [Fe] 1, chloroplastic-like 4339922 OSNPB_060115400 5.2 5.6
 4.8
 2.6
0.7
 4.4
2.2
 1.8
1.6
 3.2
2.6
 0.8
-0.6
 1.7
41 LOC4329119 uncharacterized LOC4329119 4329119 Os02g0307800 5.2 5.2
 5.1
 4.5
 5.9
3.3
 4.3
2.0
 5.6
 4.5
 2.5
-0.2
42 LOC4326517 uncharacterized LOC4326517 4326517 Os01g0940600 5.1 3.2
 7.1
 1.4
 4.1
 3.9
 1.0
 4.5
 3.4
43 LOC4348816 tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 4348816 Os10g0461100 5.1 4.5
 5.6
 5.3
 5.0
4.5
 3.6
3.5
 3.3
 0.7
0.4
 3.2
44 LOC4331189 50S ribosomal protein L9, chloroplastic 4331189 Os02g0822600 5.1 4.9
 5.2
 5.8
 3.0
2.1
 3.0
2.6
 5.6
 2.7
 3.4
45 LOC4342438 RNA-binding protein CP33, chloroplastic 4342438 Os07g0158300 5.1 4.7
 5.5
 4.8
 4.6
3.8
 3.9
3.2
 5.9
 3.7
2.2
 3.2
1.5
46 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 5.1 4.4
 5.8
 5.4
 3.5
2.7
 4.2
3.9
 4.9
 2.4
 3.1
47 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 5.0 5.8
 4.3
 6.6
 4.6
 5.1
 4.5
4.1
 2.7
2.5
 4.2
48 LOC4347400 uncharacterized LOC4347400 4347400 Os09g0481800 5.0 2.7
 7.3
 2.3
 3.5
1.8
 3.9
2.3
 2.1
 1.2
 1.3
49 LOC9272428 50S ribosomal protein L19-2, chloroplastic 9272428 Os02g0652600 5.0 6.7
6.0
5.3
 3.9
3.9
 5.0
4.6
 5.7
 3.0
 5.8
50 LOC4337135 uncharacterized LOC4337135 4337135 Os04g0635700 5.0 3.9
 6.0
 0.7
 3.1
2.5
 5.1
2.1
 1.7
 0.9
0.8
 2.4
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