Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4332959   KH domain-containing protein At4g18375 
 osa-r.5   4332959   KH domain-containing protein At4g18375 
 osa-m.8   4332959   KH domain-containing protein At4g18375 
 ath-u.4   AT5G15270   RNA-binding KH domain-containing protein 
 ath-u.4   AT1G14170   RNA-binding KH domain-containing protein 
 gma-u.4   100804157   KH domain-containing protein HEN4 
 gma-u.4   100793526   KH domain-containing protein HEN4 
 gma-u.4   100784791   RNA-binding KH domain-containing protein RCF3 
 sly-u.4   101245943   KH domain-containing protein At4g18375 
 sly-u.4   101244550   RNA-binding KH domain-containing protein 
 ppo-u.4   7495986   RNA-binding KH domain-containing protein RCF3 
 ppo-u.4   7492929   KH domain-containing protein At4g18375 
 ppo-u.4   7498181   KH domain-containing protein At4g18375 
 mtr-u.4   11422996   RNA-binding KH domain-containing protein RCF3 
 mtr-u.4   11414473   KH domain-containing protein HEN4 

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Top 50 coexpressed genes to 4332959 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3040   Spliceosome  8 177 8.48
 osa3015   mRNA surveillance pathway  5 110 5.46
 osa3022   Basal transcription factors  2 41 2.47
 osa3050   Proteasome  2 62 2.12
 osa3013   Nucleocytoplasmic transport  2 109 -

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osa:LOC4332959 (KH domain-containing protein At4g18375) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4332959
osa-r.5
for
4332959
osa-m.8
for
4332959
ath-u.4
for
AT5G15270
ath-u.4
for
AT1G14170
gma-u.4
for
100804157
gma-u.4
for
100793526
gma-u.4
for
100784791
sly-u.4
for
101245943
sly-u.4
for
101244550
ppo-u.4
for
7495986
ppo-u.4
for
7492929
ppo-u.4
for
7498181
mtr-u.4
for
11422996
mtr-u.4
for
11414473
1 LOC4327865 putative uncharacterized protein DDB_G0277255 4327865 Os01g0663800 5.4 4.9
 5.9
 1.6
1.6
 0.6
0.5
 3.8
2.7
 2.9
2.7
 0.3
0.1
 3.6
2.0
 5.7
4.6
 3.1
1.2
 2.5
0.8
 0.4
-0.2
 1.6
 2.8
2 LOC4343757 eukaryotic peptide chain release factor subunit 1-3 4343757 Os07g0587400 5.0 5.2
 4.8
 1.7
0.4
 1.7
1.4
 1.5
1.2
 6.1
2.0
 2.0
1.1
 1.6
1.5
 2.7
2.5
 3.9
2.7
 2.2
2.0
 2.2
1.6
 2.6
2.2
 3.3
2.7
3 LOC4351542 trithorax group protein osa 4351542 Os12g0155300 5.0 5.3
 4.7

3.6
3.1
 3.5
1.6
 2.8
1.8
 5.5
 6.7
 1.9
0.4
 1.8
0.8
 1.8
1.5
 2.2
 3.1
4 LOC4330546 PHD finger protein At3g20280 4330546 Os02g0720000 4.8 6.4
 3.2
 2.2
-0.2
 -0.9
-2.1
 1.5
0.3
 1.3
0.4
 0.1
-0.3
 3.0
2.6
 3.6
3.0
 3.0
 2.3
 2.3
 1.0
 1.2
5 LOC9268289 poly(A)-specific ribonuclease PARN 9268289 Os04g0467400 4.7 6.3
 3.1
 1.3
 -0.6
 -0.6
-2.0
 0.7
-0.0
 -0.2
-1.9
 1.7
 0.3
 0.6
 0.7
 1.4
 1.2
 0.6
6 LOC4345227 protein SMG7 4345227 Os08g0305300 4.7 5.1
 4.3
 0.2
 0.4
 3.2
3.1
 2.7
2.6
 2.1
1.7
 3.0
2.9
 3.4
2.5
 3.5
0.9
 2.1
1.8
 -0.0
-0.7
 2.5
1.3
 3.8
2.9
7 LOC4327782 RNA-binding KH domain-containing protein RCF3 4327782 Os01g0235800 4.6 4.6
 4.6

2.6
1.9
 1.5
1.4
 2.2
0.3
 3.2
 3.3
 0.8
 1.9
 1.6
 3.2
 3.3
8 LOC4340450 uncharacterized LOC4340450 4340450 Os06g0209300 4.6 4.9
 4.4
 1.3
 -1.0
 3.7
3.2
 2.6
2.2
 1.9
1.8
 3.3
 4.0
 4.4
1.4
 2.7
1.8
 1.4
1.1
 1.9
 2.7
9 LOC4338949 mediator of RNA polymerase II transcription subunit 13 4338949 Os05g0447580 4.5 6.8
2.8
 -1.9
 2.8
2.6
 3.1
2.0
 2.6
1.8
 3.4
 4.4
 3.8
0.9
 3.3
1.9
 2.1
1.1
 1.5
 2.4
10 LOC4345621 THO complex subunit 4D 4345621 Os08g0427900 4.3 4.0
 4.7
 1.0
0.7
 -0.8
-1.2
 0.6
-0.8
 1.3
0.8
 0.7
0.3
 3.6
1.3
 2.0
1.7
 1.7
0.5
 2.6
1.7
 0.4
-0.3
 2.5
 2.8
11 LOC4344716 DEAD-box ATP-dependent RNA helicase 42-like 4344716 OSNPB_080159900 4.3 8.2
 0.5
 5.7
 -0.9
 2.4
2.1
 2.3
1.7
 2.0
1.8
 5.2
 4.1
 6.4
3.8
 2.6
0.8
 1.4
-0.1
 1.1
 2.2
12 LOC4336893 dual specificity protein kinase YAK1 homolog 4336893 Os04g0602800 4.3 4.0
 4.5
 2.5
 0.1
 3.6
3.5
 2.6
2.6
 1.5
1.4
 1.7
 3.7
 3.0
2.2
 2.4
2.0
 1.6
1.6
 2.5
 3.5
13 LOC4332476 serine/arginine-rich splicing factor RS2Z32 4332476 Os03g0285900 4.3 3.5
 5.0
 3.2
1.3
 -2.4
-2.7
 3.4
2.8
 3.1
1.7
 2.2
1.8
 2.6
1.8
 1.6
0.8
 3.8
3.2
 2.3
2.2
 1.4
1.1
 3.6
 3.5
14 LOC4349406 RNA-binding KH domain-containing protein PEPPER 4349406 Os10g0564000 4.2 4.2
 4.3
 -0.2
 0.3
 2.2
1.7
 2.0
1.3
 0.6
-0.7
 2.3
 4.3
 2.2
0.8
 1.7
0.7
 0.0
-0.2
 2.4
1.7
 2.5
1.6
15 LOC4350648 retinoblastoma-related protein 2-like 4350648 OSNPB_110533500 4.2 3.3
 5.1











16 LOC4344971 26S proteasome non-ATPase regulatory subunit 1 homolog A 4344971 Os08g0224700 4.2 4.8
 3.5
 1.6
1.5
 -0.3
-0.9
 4.1
2.7
 2.0
1.5
 0.5
0.3
 1.5
0.8
 4.5
4.4
 2.3
2.0
 3.3
1.4
 1.1
0.2
 3.2
1.5
 4.5
3.0
17 LOC4344900 KH domain-containing protein At4g18375 4344900 Os08g0200400 4.1 4.1
 4.1
 5.5
1.6
 0.8
-1.0
 6.3
 4.0
 5.0
 6.4
 5.5
 3.0
2.5
 4.7
2.7
 4.4
2.1
 2.7
1.0
 2.3
1.5
18 LOC4347579 flowering time control protein FPA 4347579 Os09g0516300 4.1 6.0
 2.2
 0.7
 -0.2
 5.2
2.2
 4.3
4.2
 5.4
4.7
 2.7
 3.2
 2.2
0.9
 2.0
1.4
 -0.1
-0.7
 2.1
 3.5
19 LOC4329507 gamma-tubulin complex component 5 4329507 Os02g0523300 4.1 5.3
 2.9
 3.0
0.5
 -0.5
-1.0
 0.7
 -0.4
 0.2
 0.5
 2.3
 1.1
 0.9
 1.8
 0.3
 1.9
20 LOC4328024 DExH-box ATP-dependent RNA helicase DExH12 4328024 Os02g0107000 4.1 4.0
 4.2
 3.4
0.9
 -0.8
-0.9
 4.3
3.0
 2.6
1.7
 2.3
1.5
 3.0
2.0
 3.6
1.4
 2.3
1.8
 3.5
0.7
 1.2
1.1
 1.0
-0.1
 1.1
0.2
21 LOC4335667 uncharacterized LOC4335667 4335667 Os04g0388800 4.1 5.3
 2.9
 4.9
3.0
 -0.1
-0.8
 3.4
2.4
 2.5
1.8
 3.6
2.0
 2.6
2.5
 2.7
2.6
 3.0
0.8
 3.1
2.1
 1.0
0.5
 1.5
1.4
 4.2
2.9
22 LOC4324222 transcriptional corepressor LEUNIG 4324222 Os01g0607400 4.1 5.8
 2.3
 1.8
 -0.5
 4.3
3.3
 2.2
1.3
 1.6
1.5
 2.1
 3.9
 0.8
-1.0
 2.8
1.7
 0.6
0.5
 3.3
0.8
 2.7
1.9
23 LOC4332960 polypyrimidine tract-binding protein homolog 1 4332960 Os03g0376900 4.0 2.4
 5.6
 2.6
1.2
 0.4
-1.7
 4.2
1.7
 3.6
3.5
 2.1
2.0
 3.0
2.1
 4.5
3.3
 4.4
4.4
 5.0
4.0
 3.4
2.5
 1.7
1.3
 2.4
2.1
24 LOC4339803 casein kinase 1-like protein 2 4339803 Os05g0593800 4.0 3.8
 4.2
 1.2
1.2
 0.6
0.2
 1.8
1.5
 2.2
1.3
 1.5
1.4
 2.0
2.0
 1.5
0.7
 4.9
3.3
 3.1
2.2
 1.4
1.1
 2.2
2.0
 2.3
2.2
25 LOC4344833 polyadenylation and cleavage factor homolog 4 4344833 Os08g0187700 4.0 4.9
 3.1
 2.8
 -2.5
 1.2
-0.1
 2.1
1.0
 1.5
0.7
 2.9
 2.6
 0.9
0.6
 2.5
2.5
 2.7
0.4
 1.2
 2.5
26 LOC4327108 shaggy-related protein kinase alpha 4327108 Os01g0252100 4.0 4.0
 3.9
 1.8
1.4
 1.9
1.1
 3.4
2.1
 1.2
1.1
 2.0
1.6
 2.1
1.6
 2.2
1.9
 2.6
2.1
 3.0
2.5
 2.5
1.9
 1.8
1.8
 3.9
2.4
27 LOC4343162 uncharacterized LOC4343162 4343162 Os07g0461600 4.0 4.8
 3.1
 2.2
 -1.4
 0.8
0.5
 2.3
1.0
 1.0
0.9
 2.3
 2.5
 2.6
1.8
 2.3
2.1
 0.1
-0.9
 1.8
-0.2
 2.2
1.0
28 LOC4340565 homeobox protein HAZ1-like 4340565 Os06g0229300 3.9 4.3
 3.5
 1.3
 0.2
 0.4
-0.1
 2.6
2.4
 -0.3
-0.3
 2.3
 1.9
 -0.0
-0.1
 1.6
0.8
 1.2
0.8
 0.8
 1.7
29 LOC4324027 transcription initiation factor TFIID subunit 6 4324027 Os01g0510800 3.9 5.7
 2.1
 3.4
 -1.6
 1.3
0.1
 0.5
0.1
 1.5
-0.2
 0.7
-1.2
 2.1
-0.3
 1.4
1.2
 2.8
0.9
 0.8
0.6
 0.2
-1.2
 0.9
0.4
30 LOC4326480 exocyst complex component SEC15B 4326480 Os01g0351300 3.9 2.2
 5.6
 -0.6
 2.6
 3.8
2.6
 1.3
0.8
 2.9
2.2
 1.0
 1.9
 1.5
0.6
 0.9
0.5
 0.8
0.6
 3.5
 4.4
31 LOC4346506 protein RDM16 4346506 Os09g0249600 3.9 3.5
 4.3
 0.6
 -1.3
 3.5
2.4
 5.1
3.4
 3.1
1.8
 1.4
1.3
 4.0
0.6
 3.5
2.8
 2.8
2.6
 1.5
1.3
 3.5
1.4
 4.6
2.9
32 LOC4334703 glycine-rich RNA-binding protein RZ1A 4334703 Os03g0836200 3.9 3.9
 3.8

4.9
2.6
 3.0
1.8
 3.0
1.5
 3.0
2.8
 1.1
0.6
 5.7
 3.7
 0.9
 3.5
3.3
 3.9
3.6
33 LOC4337147 UBP1-associated protein 2B 4337147 Os04g0636900 3.8 3.6
 4.1











34 LOC4331185 ubiquitin carboxyl-terminal hydrolase 2 4331185 Os02g0822200 3.8 4.1
 3.6
 0.9
0.5
 -0.1
-0.9
 1.0
-0.8
 -0.6
-1.0
 0.7
-1.0
 1.8
 2.5
 -0.3
-0.6
 -0.8
-0.9
 -0.6
-1.1
 0.3
 0.1
35 LOC4337319 zinc finger CCCH domain-containing protein 31-like 4337319 OSNPB_040665700 3.8 2.6
 5.0
 -0.3
-0.8
 -0.2
-0.4
 1.8
0.5
 1.9
0.9
 0.5
-0.1
 1.9
0.7
 1.8
1.3
 3.8
1.7
 2.7
1.7
 0.4
-0.0
 1.4
1.1
 2.9
2.2
36 LOC4340446 putative transcription elongation factor SPT5 homolog 1 4340446 Os06g0208300 3.8 3.9
 3.7
 2.3
 -0.4
 4.3
3.8
 3.7
3.0
 2.9
2.0
 4.4
 5.8
 2.6
-0.6
 1.9
1.5
 0.8
0.1
 4.3
 4.6
37 LOC4340675 THO complex subunit 4D 4340675 Os06g0256200 3.8 3.9
 3.6











38 LOC4346231 RNA-binding protein 1 4346231 Os08g0547000 3.8 2.7
 4.9
 1.3
 0.4
 1.8
1.2
 2.1
2.1
 2.9
1.3
 2.8
2.0
 1.7
1.4
 2.3
2.2
 1.2
0.6
 0.3
-0.4
 4.9
2.2
 4.1
2.6
39 LOC4352925 serine/threonine-protein kinase prpf4B 4352925 Os12g0640800 3.8 4.4
 3.2
 4.3
3.0
 -0.1
-0.5
 2.7
2.0
 4.5
4.2
 4.1
4.0
 3.5
 3.9
 3.7
3.4
 2.5
2.4
 2.3
1.6
 2.7
 2.6
40 LOC4329687 calmodulin-binding protein 60 D 4329687 Os02g0562300 3.8 4.0
 3.5
 1.7
1.0
 1.0
0.3
 3.0
2.8
 2.4
1.3
 3.2
1.6
 2.4
0.7
 3.2
0.8
 3.2
3.0
 1.7
0.9
 2.0
1.4
 1.7
0.4
 2.9
1.0
41 LOC4348513 F-box/kelch-repeat protein SKIP30 4348513 Os10g0388200 3.8 4.6
 2.9
 1.7
 -0.9
 3.4
1.3
 2.8
1.2
 2.2
1.5
 2.7
0.8
 1.3
0.2
 1.0
0.0
 1.7
-0.2
 -0.0
-1.0
 0.5
 1.8
42 LOC4341904 DNA repair protein REV1 4341904 Os06g0691000 3.7 4.2
 3.3
 5.1
 -1.1
 0.3
 2.2
 2.6
 2.1
 2.7
 1.9
 2.4
 0.4
 1.1
 1.7
43 LOC4332645 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 4332645 Os03g0314100 3.7 4.5
 3.0
 3.2
2.6
 -0.8
-1.4
 1.6
0.9
 4.8
3.8
 1.0
0.7
 4.0
 3.5
 6.3
2.7
 4.4
3.4
 1.2
0.9
 2.6
1.0
 2.0
2.0
44 LOC4328582 protein FLX-like 2 4328582 Os02g0192100 3.7 3.0
 4.4
 0.5
 0.8
 1.1
 2.9
 1.4
 1.7
 4.2
 2.2
 1.9
 -0.5
 2.3
 3.3
45 LOC9266519 uncharacterized LOC9266519 9266519 Os03g0667700 3.7 2.5
 4.9
 1.2
 -1.5
 -0.8
-1.1
 0.7
0.3
 -0.4
-0.5
 0.8
 1.2
 1.7
0.9
 1.6
0.8
 0.5
-0.0
 1.2
 0.7
46 LOC4338043 lysine-specific demethylase JMJ703-like 4338043 OSNPB_050196500 3.7 3.8
 3.7
 1.0
 -0.4
 1.6
1.2
 0.0
-0.1
 1.0
0.8
 3.4
 3.2
 1.3
-0.3
 1.2
0.4
 0.8
-0.4
 1.8
 2.6
47 LOC4344847 polyadenylate-binding protein RBP45 4344847 Os08g0190200 3.7 2.8
 4.6
 1.2
0.9
 0.1
-0.5
 3.2
2.2
 1.7
1.5
 1.4
0.6
 1.8
1.8
 5.0
2.7
 4.5
4.2
 3.3
3.0
 2.4
2.3
 3.4
0.1
 4.2
0.1
48 LOC4325108 sister chromatid cohesion 1 protein 4 4325108 Os01g0897800 3.7 5.6
 1.8
 2.0
 0.2
 2.7
1.2
 1.1
-0.6
 0.7
-0.5
 2.1
 3.7
 2.5
1.9
 3.4
3.0
 1.7
1.3
 1.3
 3.1
49 LOC4328642 26S proteasome regulatory subunit S10B homolog B 4328642 Os02g0199900 3.7 3.8
 3.6
 0.4
0.3
 0.8
0.3
 2.4
1.7
 1.0
0.1
 0.6
-0.0
 0.4
-1.3
 3.8
-1.3
 2.2
1.4
 -0.3
-0.5
 0.9
0.0
 1.8
0.9
 1.7
1.1
50 LOC4342682 transcription initiation factor TFIID subunit 5 4342682 Os07g0205200 3.7 3.7
 3.6
 3.0
 -1.4
 3.1
1.3
 2.0
1.2
 1.2
0.5
 3.8
 4.5
 1.9
0.5
 1.4
0.6
 1.0
0.7
 2.0
 1.9
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