Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4333040   pentatricopeptide repeat-containing protein At4g33990 
 osa-r.5   4333040   pentatricopeptide repeat-containing protein At4g33990 
 osa-m.8   4333040   pentatricopeptide repeat-containing protein At4g33990 
 ath-u.4   EMB2758   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.4   100802551   pentatricopeptide repeat-containing protein At4g33990 
 sly-u.4   101249519   pentatricopeptide repeat-containing protein At4g33990 
 ppo-u.4   7480423   pentatricopeptide repeat-containing protein At4g33990 
 mtr-u.4   11427801   pentatricopeptide repeat-containing protein At4g33990 

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Top 50 coexpressed genes to 4333040 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa240   Pyrimidine metabolism  1 63 -
 osa1232   Nucleotide metabolism  1 80 -
 osa230   Purine metabolism  1 91 -
 osa480   Glutathione metabolism  1 114 -
 osa4141   Protein processing in endoplasmic reticulum  1 224 -

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osa:LOC4333040 (pentatricopeptide repeat-containing protein At4g33990) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4333040
osa-r.5
for
4333040
osa-m.8
for
4333040
ath-u.4
for
EMB2758
gma-u.4
for
100802551
sly-u.4
for
101249519
ppo-u.4
for
7480423
mtr-u.4
for
11427801
1 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 5.3 3.3
 7.2
3.8
 1.0
2.2
2 LOC4348962 putative pentatricopeptide repeat-containing protein At5g52630 4348962 Os10g0488900 5.1 3.6
 6.7




3 LOC4337840 pentatricopeptide repeat-containing protein At2g13600 4337840 Os05g0153400 5.0 2.2
 7.9




4 LOC4351284 putative pentatricopeptide repeat-containing protein At3g08820 4351284 Os12g0109300 4.8 3.7
 5.9
 6.7
 7.0
 1.7
 2.5
1.2
 3.2
5 LOC4339896 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4339896 Os06g0112000 4.7 3.1
 6.3
 5.4
 3.6
0.5
 1.7
 2.6
 3.6
0.5
6 LOC4334286 pentatricopeptide repeat-containing protein At2g22070 4334286 Os03g0775400 4.6 3.9
 5.3
 5.3
 5.0
 0.9

7 LOC4345325 pentatricopeptide repeat-containing protein At4g39530 4345325 Os08g0340900 4.3 2.6
 6.0
 8.6
 3.3
 1.5

8 LOC4338264 putative pentatricopeptide repeat-containing protein At1g10330 4338264 Os05g0271900 4.2 1.8
 6.6
 3.4
 1.5
 1.8

9 LOC4332013 putative pentatricopeptide repeat-containing protein At1g02420 4332013 Os03g0208600 3.9 1.6
 6.2
3.5
 2.3
 2.5
 3.1
10 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 3.9 1.4
 6.4
4.9
3.6
 1.7

11 LOC4327814 pentatricopeptide repeat-containing protein At3g16610 4327814 Os01g0977400 3.9 1.7
 6.0
4.4
1.5
 1.8
12 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 3.8 3.4
 4.2




13 LOC4350793 pentatricopeptide repeat-containing protein At4g14850 4350793 Os11g0583300 3.8 3.7
 3.9
 6.5
 3.2
 1.9
2.7
2.0
14 LOC4344262 pentatricopeptide repeat-containing protein At3g18020 4344262 Os07g0674300 3.7 1.2
 6.2
 6.5
 5.3
 0.6
 2.4
 2.8
15 LOC4348029 uncharacterized LOC4348029 4348029 Os10g0128800 3.6 2.9
 4.3




16 LOC4351907 pentatricopeptide repeat-containing protein At5g27110 4351907 Os12g0256900 3.5 2.8
 4.2
5.6
 2.7

17 LOC4349672 non-structural maintenance of chromosomes element 1 homolog 4349672 Os11g0130300 3.5 2.4
 4.7
 2.6
 -0.2
 0.7
 -0.5
 1.2
18 LOC9267687 pentatricopeptide repeat-containing protein At5g43790 9267687 Os12g0128200 3.5 1.5
 5.5
 3.9
1.0
2.0
19 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 3.5 1.6
 5.3




20 LOC4335906 protein disulfide isomerase-like 1-2 4335906 OSNPB_040436300 3.4 3.4
 3.5
 -0.1
-0.6
 0.1
-0.4
 -0.1
-0.4
 0.3
 -1.1
21 LOC4345420 putative pentatricopeptide repeat-containing protein At3g25970 4345420 Os08g0375800 3.4 2.4
 4.5
 6.9
 5.2
 1.4

22 LOC4334929 pentatricopeptide repeat-containing protein At3g29230 4334929 Os04g0110500 3.4 1.7
 5.1




23 LOC4345266 uncharacterized LOC4345266 4345266 3.4 1.8
 5.0




24 LOC4342470 pentatricopeptide repeat-containing protein At3g62890 4342470 Os07g0163900 3.4 4.9




2.6
25 LOC4345516 pentatricopeptide repeat-containing protein At5g12100, mitochondrial 4345516 Os08g0402600 3.3 2.9
 3.7




26 LOC4334193 pentatricopeptide repeat-containing protein At1g77360, mitochondrial 4334193 Os03g0761300 3.3 1.6
 4.9
 4.2
 2.1
 0.9
 2.2
 2.8
27 LOC4350437 short integuments 2, mitochondrial 4350437 Os11g0447300 3.3 1.7
 4.9
 2.9
 3.3
1.0
 0.9
0.3
 2.8
 1.6
28 LOC4333891 zinc finger protein VAR3, chloroplastic 4333891 Os03g0712200 3.2 1.7
 4.8
3.3
 0.8
 1.2
 2.2
29 LOC4339725 putative pentatricopeptide repeat-containing protein At3g47840 4339725 Os05g0581300 3.2 4.1

2.1
 1.5
2.6
30 LOC4345759 uncharacterized LOC4345759 4345759 Os08g0459100 3.2 2.3
 4.2
 1.6
 1.4
1.4
 1.3
 0.7
0.2
 3.2
0.2
31 LOC4346770 L-type lectin-domain containing receptor kinase IX.1 4346770 Os09g0334800 3.2 2.4
 4.0




32 LOC4334088 pentatricopeptide repeat-containing protein At3g22670, mitochondrial 4334088 Os03g0746400 3.2 2.1
 4.3
3.2
2.1
 1.0
2.8
33 LOC4333330 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4333330 Os03g0582100 3.2 2.0
 4.4




34 LOC4327795 F-box only protein 7 4327795 Os01g0530500 3.1 2.2
 4.0




35 LOC4328126 pentatricopeptide repeat-containing protein At1g02060, chloroplastic 4328126 Os02g0121900 3.1 1.4
 4.7
 4.4
1.7
 2.0
 2.7
36 LOC4351584 pentatricopeptide repeat-containing protein At4g15720 4351584 Os12g0163600 3.1 0.6
 5.5



2.4
37 LOC4324326 pentatricopeptide repeat-containing protein At1g05600 4324326 Os01g0913800 3.0 1.8
 4.1
 2.0
 3.3
 1.5
 0.1
 1.5
0.0
38 LOC9269712 ABC transporter A family member 7 9269712 Os09g0360900 2.9 3.1
 2.8
 -0.0
-0.1
 -0.2
-0.4
 0.3
-1.4
 -0.9
-1.2
 0.5
-0.6
39 LOC4334236 pentatricopeptide repeat-containing protein At5g46460, mitochondrial 4334236 Os03g0767700 2.9 1.5
 4.4
 1.3



40 LOC4327956 pentatricopeptide repeat-containing protein At1g33350 4327956 Os01g0800400 2.9 1.5
 4.4



1.8
41 LOC4344190 putative pentatricopeptide repeat-containing protein At5g40405 4344190 Os07g0662700 2.9 1.3
 4.6




42 LOC4327598 putative pentatricopeptide repeat-containing protein At5g40405 4327598 Os01g0814300 2.9 1.8
 4.0

1.0

43 LOC4332647 pentatricopeptide repeat-containing protein At1g05750, chloroplastic 4332647 Os03g0314400 2.9 1.5
 4.3
9.9
 1.7
 2.6
 4.1
44 LOC4339672 pentatricopeptide repeat-containing protein At5g39680 4339672 Os05g0572900 2.8 1.6
 4.1
 5.7
 6.0
 1.0
2.9
45 LOC4341594 nuclear intron maturase 4, mitochondrial 4341594 Os06g0634100 2.8 1.9
 3.8
1.4
 0.4
 3.1
 2.8
46 LOC4342414 non-structural maintenance of chromosomes element 3 homolog 4342414 Os07g0151300 2.8 2.2
 3.4
 0.8
 -0.0
-0.4
 1.2
 -0.6
 0.6
47 LOC4340258 ribonucleoside-diphosphate reductase large subunit 4340258 Os06g0168600 2.8 1.8
 3.8
 -0.2
 1.4
0.7
 -0.3
-0.6
 1.1
0.5
 2.1
2.0
48 LOC4344729 pentatricopeptide repeat-containing protein At4g22760 4344729 Os08g0162200 2.8 3.3
 2.3
 4.6
-0.7
 2.7
 3.9
49 LOC4351121 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4351121 Os11g0680200 2.8 1.2
 4.3
 7.2
 5.3
 0.9

50 LOC4330986 putative pentatricopeptide repeat-containing protein At4g17915 4330986 Os02g0793200 2.8 1.9
 3.7
 6.2
 5.3
 1.1
-0.1
 0.9
 2.8
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