Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4333379   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 osa-r.5   4333379   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 osa-m.8   4333379   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 ath-u.4   MEE40   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.4   100807932   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 sly-u.4   101264147   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 ppo-u.4   7479044   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 mtr-u.4   25484125   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 

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Top 50 coexpressed genes to 4333379 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa220   Arginine biosynthesis  1 36 -
 osa330   Arginine and proline metabolism  1 58 -
 osa561   Glycerolipid metabolism  1 84 -
 osa480   Glutathione metabolism  1 114 -
 osa564   Glycerophospholipid metabolism  1 120 -

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osa:LOC4333379 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4333379
osa-r.5
for
4333379
osa-m.8
for
4333379
ath-u.4
for
MEE40
gma-u.4
for
100807932
sly-u.4
for
101264147
ppo-u.4
for
7479044
mtr-u.4
for
25484125
1 LOC9269461 uncharacterized LOC9269461 9269461 5.4 3.8
 7.0




2 LOC4334509 calreticulin-2 4334509 5.0 4.6
 5.4




3 LOC4347865 uncharacterized LOC4347865 4347865 Os09g0563800 4.7 3.9
 5.4




4 LOC4334263 uncharacterized LOC4334263 4334263 4.6 3.7
 5.5




5 LOC9270353 5-oxoprolinase 9270353 Os01g0966000 4.5 3.7
 5.2
 2.3
 1.6
 1.2
 0.6
 3.1
6 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 4.3 5.3
 3.3
 3.4
 5.4
4.7
 6.5
 4.0
2.3
 2.7
7 LOC4330652 pentatricopeptide repeat-containing protein At2g13600 4330652 Os02g0735800 4.2 5.4
 3.1




8 LOC4328006 putative nitric oxide synthase 4328006 OSNPB_020104700 4.2 4.7
 3.6
 4.9
 2.9
2.3
 3.0
 2.5
 4.2
9 LOC4331715 pentatricopeptide repeat-containing protein At3g23020 4331715 Os03g0163000 4.1 4.3
 3.9
 3.6
 4.8
4.3
 3.1
 3.6
 1.9
1.4
10 LOC4326462 uncharacterized LOC4326462 4326462 Os01g0101600 4.1 3.5
 4.6
 -0.1
 -0.9
 -1.7
 1.2
0.6
 1.6
11 LOC4335520 uncharacterized LOC4335520 4335520 Os04g0340800 4.1 3.3
 4.8




12 LOC4352686 uncharacterized LOC4352686 4352686 Os12g0594200 4.0 4.0
 4.0
 0.3
 0.0
 -1.7
 0.0
 1.1
13 LOC107275646 NLR family CARD domain-containing protein 3 107275646 Os06g0237502 4.0 5.5
4.7
 3.6
3.1
 3.7
 2.7
 1.3
14 LOC4345004 uncharacterized LOC4345004 4345004 Os08g0233300 3.9 2.2
 5.6




15 LOC4335702 chaperone protein ClpC1, chloroplastic-like 4335702 OSNPB_040397100 3.9 4.9
 2.9
 2.6
2.1
 4.6
4.5
 3.4
0.7
 2.4
1.7
 4.0
3.1
16 LOC4333146 ubiquitin carboxyl-terminal hydrolase 12 4333146 Os03g0424000 3.9 2.4
 5.4




17 LOC4345271 ribonuclease E/G-like protein, chloroplastic 4345271 Os08g0323600 3.9 4.5
 3.2
 4.5
 5.4
4.2
 5.6
 2.2
 3.3
18 LOC4330729 uncharacterized LOC4330729 4330729 3.9 3.4
 4.3




19 LOC4328994 proteinaceous RNase P 1, chloroplastic/mitochondrial 4328994 Os02g0273800 3.8 4.0
 3.6
3.9
 4.2
 1.5
 3.7
20 LOC4335166 UDP-glycosyltransferase 79-like 4335166 Os04g0206600 3.8 2.4
 5.2
 1.3
0.6
 0.2
0.1
 2.6
1.6
 1.2
1.0
 1.3
0.8
21 LOC9266421 uncharacterized LOC9266421 9266421 3.8 4.0
 3.6




22 LOC4325126 uncharacterized LOC4325126 4325126 Os01g0262700 3.7 2.4
 5.0
 -1.4
 -0.0
 0.3
 -2.6
 -0.6
23 LOC4336891 pentatricopeptide repeat-containing protein At3g22150, chloroplastic 4336891 Os04g0602600 3.7 4.3
 3.0
 4.6
 3.2
 2.5
 3.0
 2.6
24 LOC4324545 uncharacterized LOC4324545 4324545 3.6 2.4
 4.9




25 LOC4326942 uncharacterized LOC4326942 4326942 Os01g0930000 3.6 4.3
 2.9
 1.3
 1.7
 3.1
 1.4
 -0.4
26 LOC4333099 golgin subfamily A member 6-like protein 7 4333099 Os03g0411900 3.6 2.1
 5.1




27 LOC107279536 uncharacterized LOC107279536 107279536 3.6 4.3





28 LOC4324108 uncharacterized LOC4324108 4324108 3.6 4.3
 2.8




29 LOC4324772 5'-3' exonuclease 4324772 Os01g0874800 3.5 5.0
 2.1
 3.4
 5.4
 2.6
 0.6
 4.1
30 LOC4341108 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic 4341108 Os06g0498900 3.5 4.6
 2.5
 7.2
 5.9
 3.0
 4.3
 5.7
31 LOC4351063 pentatricopeptide repeat-containing protein At4g14050, mitochondrial 4351063 Os11g0661000 3.5 2.5
 4.5
 0.7
 2.9
 0.8
0.3
32 LOC9267297 uncharacterized LOC9267297 9267297 3.5 2.4
 4.6




33 LOC4328709 cysteine-rich receptor-like protein kinase 10 4328709 Os02g0212975 3.5 4.4





34 LOC4342554 pentatricopeptide repeat-containing protein At4g20740 4342554 Os07g0179000 3.5 2.8
 4.1
 3.6
 4.4
3.4
 0.9
 1.9
 0.9
35 wsl6 white stripe leaf6 9271571 OSNPB_050567300 3.5 2.8
 4.1
 3.7
 2.2
0.5
 4.9
 2.8
 2.7
36 LOC4338157 uncharacterized LOC4338157 4338157 3.5 2.4
 4.5




37 LOC4340091 superoxide dismutase [Fe] 2, chloroplastic-like 4340091 OSNPB_060143000 3.5 4.9
 2.0
 4.7
 2.0
 3.2
 2.3
 1.5
38 LOC4329945 uncharacterized LOC4329945 4329945 3.4 3.5
 3.4




39 LOC4349502 glycerol-3-phosphate acyltransferase, chloroplastic 4349502 Os10g0577900 3.4 3.3
 3.6
 2.0
 1.0
-0.0
 2.4
 0.1
 0.2
40 wsl4 white stripe leaf4 4329703 Os02g0565400 3.4 3.6
 3.3




41 LOC9267825 uncharacterized LOC9267825 9267825 Os03g0840500 3.4 4.3
-1.0
 1.6
0.5
 -1.5
 -0.6
-1.8
 0.9
0.2
42 LOC9266753 uncharacterized LOC9266753 9266753 3.4 4.3





43 LOC4338897 uncharacterized LOC4338897 4338897 3.4 2.3
 4.5




44 LOC9267918 protein ROOT PRIMORDIUM DEFECTIVE 1 9267918 Os02g0464400 3.4 4.0
0.9
 0.8
 2.4
3.5
45 LOC4339890 pentatricopeptide repeat-containing protein At5g27270 4339890 Os06g0111300 3.4 3.4
 3.4
 3.4
 2.0
 2.8
 1.5
1.2
 3.1
46 LOC4346463 PRA1 family protein H 4346463 Os09g0134400 3.4 3.9
 2.9
 0.5
 0.3
 -0.5
 2.5
2.1
 1.9
47 LOC9270151 uncharacterized LOC9270151 9270151 3.4 4.2





48 LOC4351993 uncharacterized LOC4351993 4351993 Os12g0285100 3.4 3.8
 2.9




49 LOC4333236 uncharacterized LOC4333236 4333236 3.4 1.5
 5.3




50 LOC4338780 uncharacterized protein Cbei_0202 4338780 Os05g0411200 3.4 4.3
 2.5
 5.0
 2.9
1.6
 2.2
 0.1
 1.2
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