Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4333489   pentatricopeptide repeat-containing protein At5g66500, mitochondrial 
 osa-r.5   4333489   pentatricopeptide repeat-containing protein At5g66500, mitochondrial 
 osa-m.8   4333489   pentatricopeptide repeat-containing protein At5g66500, mitochondrial 
 ath-u.4   AT5G66500   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.4   100791451   pentatricopeptide repeat-containing protein At5g66500, mitochondrial 
 gma-u.4   121172635   pentatricopeptide repeat-containing protein At5g66500, mitochondrial-like 
 mtr-u.4   11405942   pentatricopeptide repeat-containing protein At5g66500, mitochondrial 

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Top 50 coexpressed genes to 4333489 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3008   Ribosome biogenesis in eukaryotes  1 90 -
 osa3015   mRNA surveillance pathway  2 115 -
 osa3040   Spliceosome  1 196 -

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osa:LOC4333489 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4333489
osa-r.5
for
4333489
osa-m.8
for
4333489
ath-u.4
for
AT5G66500
gma-u.4
for
100791451
gma-u.4
for
121172635
mtr-u.4
for
11405942
1 LOC4326283 ubiquitin-like-specific protease ESD4 4326283 Os01g0355900 5.8 3.9
 7.8
 1.2
0.8
 1.5
0.9
 1.8
1.1
 0.9
-0.0
2 LOC4345278 uncharacterized LOC4345278 4345278 Os08g0326300 5.3 3.9
 6.6


0.2
3 LOC4333149 zinc finger BED domain-containing protein RICESLEEPER 2-like 4333149 5.1 5.2
 5.0


1.5
0.8
4 LOC4327602 F-box protein SKIP24 4327602 Os01g0814700 4.8 3.2
 6.4
 0.2
 0.8
 -0.7
 1.2
5 LOC4340930 serine/arginine repetitive matrix protein 1 4340930 Os06g0332900 4.8 4.0
 5.5
 0.0
 2.8
2.0
 0.3
0.1
 1.3
6 LOC4324901 serine/threonine-protein kinase rio2 4324901 Os01g0888700 4.7 4.8
 4.7
 1.2
 1.4
1.3
 0.8
0.3
 0.7
7 LOC4324332 uncharacterized LOC4324332 4324332 Os01g0916300 4.7 3.1
 6.2
 -0.1
 -0.3
 0.4
 1.6
8 LOC4329930 probable protein phosphatase 2C 21 4329930 OSNPB_020606900 4.6 3.9
 5.4



9 LOC4344569 transcription factor GTE9 4344569 Os08g0127300 4.6 3.7
 5.5
 0.1
-0.5
 2.5
2.4
 3.1
2.9
 2.0
1.4
10 LOC4333925 E3 SUMO-protein ligase SIZ2-like 4333925 OSNPB_030719100 4.5 5.8
 3.2



11 LOC4337783 ribosome biogenesis protein NOP53 4337783 Os05g0144200 4.5 3.4
 5.6
 -1.4
 0.6
-0.0
 0.5
0.3
 0.7
12 LOC4349313 mediator of RNA polymerase II transcription subunit 12 4349313 Os10g0550100 4.5 3.7
 5.2
 -0.4
 1.6
1.0
 1.9
1.3
 0.6
0.3
13 LOC4340565 homeobox protein HAZ1-like 4340565 Os06g0229300 4.4 3.3
 5.5
 0.2
 1.2
0.8
 2.1
1.3
 2.1
14 LOC9268979 pentatricopeptide repeat-containing protein At4g01570 9268979 Os03g0712900 4.3 4.2
 4.3
 1.0
 0.1
 1.8
 1.7
15 LOC4342207 DDB1- and CUL4-associated factor 4 4342207 Os07g0108000 4.2 3.9
 4.6
 0.4
 0.2
0.2
 1.0
0.3
 0.8
16 LOC4334364 nuclear pore complex protein NUP1-like 4334364 4.2 3.2
 5.2
 -0.3
-0.6
 -0.4
-0.5
 0.9
0.9
 0.7
-0.2
17 LOC4324317 snRNA-activating protein complex subunit 4324317 Os01g0912600 4.1 2.7
 5.5
 0.4
 -1.0
 -1.6
 1.4
0.9
18 LOC4336234 uncharacterized LOC4336234 4336234 4.1 4.0
 4.1


0.2
19 LOC4332201 bZIP transcription factor 16 4332201 Os03g0239400 4.0 2.7
 5.4



20 LOC4337784 probable ATP-dependent DNA helicase CHR12 4337784 Os05g0144300 4.0 4.0
 4.0
 0.9
0.8
 2.2
1.4
 1.4
1.1
 1.9
1.0
21 LOC4340633 uncharacterized LOC4340633 4340633 Os06g0244100 4.0 3.6
 4.4
 1.4
 0.6
-0.6
 0.4
0.1
 0.9
22 LOC4338129 histone H3.v1 4338129 Os05g0220900 4.0 3.5
 4.5
 0.3
 -0.8
-1.1
 0.1
-0.6
 -1.0
23 LOC4350762 zinc finger CCHC domain-containing protein 7 4350762 Os11g0573200 4.0 3.6
 4.3
 -0.6
 1.5
1.1
 1.4
0.6
 1.0
-0.7
24 LOC4344833 polyadenylation and cleavage factor homolog 4 4344833 Os08g0187700 4.0 4.4
 3.5
 0.9
 0.3
-0.2
 0.8
-0.2
 0.5
25 LOC9272156 uncharacterized LOC9272156 9272156 4.0 3.0
 4.9



26 LOC4334159 uncharacterized LOC4334159 4334159 Os03g0756700 4.0 5.0




27 LOC4328668 peptidyl-prolyl cis-trans isomerase CYP95 4328668 Os02g0204300 3.9 3.7
 4.2



28 LOC4326957 auxin response factor 4-like 4326957 OSNPB_010927600 3.9 3.4
 4.4
 0.6
 3.4
2.0
 0.6
0.5
 1.2
29 LOC9270252 uncharacterized LOC9270252 9270252 3.9 3.9
 3.8



30 LOC4330546 PHD finger protein At3g20280 4330546 Os02g0720000 3.9 3.7
 4.1
 1.0
-0.4
 0.5
0.4
 1.5
1.1
 1.4
31 LOC4326095 HBS1-like protein 4326095 Os01g0116600 3.9 3.5
 4.3
 0.3
 1.3
0.7
 1.2
0.6
 -0.4
32 LOC9270561 protein CHROMATIN REMODELING 19 9270561 Os04g0566100 3.9 4.5
 3.3
 -0.3
 1.0
0.1
 1.3
1.0
 0.0
33 LOC4335199 uncharacterized LOC4335199 4335199 Os04g0221600 3.8 3.6
 4.1
 0.7
 1.9
1.7
 1.3
0.5
 1.3
34 LOC4345768 F-box/FBD/LRR-repeat protein At1g13570 4345768 Os08g0461300 3.8 4.3
 3.3



35 LOC4324674 uncharacterized protein At1g51745 4324674 Os01g0558500 3.8 3.5
 4.2
 1.2
0.7
 1.4
0.2
 2.9
1.6
 0.0
36 LOC4326744 U11/U12 small nuclear ribonucleoprotein 59 kDa protein 4326744 Os01g0226500 3.8 2.5
 5.1
 0.4
 -0.0
 0.8
 -0.6
37 LOC4331697 proline-rich receptor-like protein kinase PERK10 4331697 Os03g0160200 3.8 2.8
 4.8
 1.4
 -0.0
-0.2
 0.5
-0.2
 -0.0
38 LOC9267935 protein HUA2-LIKE 2 9267935 Os03g0358000 3.8 4.1
 3.6
 -0.4
-0.8
 0.5
0.2
 4.2
2.8
 2.0
0.4
39 LOC4352386 uncharacterized LOC4352386 4352386 Os12g0527800 3.8 2.7
 4.9
 1.3
0.2
 2.6
1.8
 0.9
0.8
 0.4
40 LOC4330516 uncharacterized LOC4330516 4330516 3.8 2.8
 4.8



41 LOC4326934 uncharacterized LOC4326934 4326934 Os01g0702400 3.7 4.0
 3.4
 0.3
 3.2
2.7
 2.1
0.4
 0.4
42 LOC4330137 pentatricopeptide repeat-containing protein At2g26790, mitochondrial 4330137 Os02g0644600 3.7 4.0
 3.3



43 LOC4345766 F-box/FBD/LRR-repeat protein At1g13570 4345766 Os08g0460900 3.7 4.9




44 LOC4345231 pentatricopeptide repeat-containing protein At5g65560 4345231 3.7 4.8




45 LOC4345834 sodium channel modifier 1 4345834 Os08g0477600 3.7 1.7
 5.7



46 LOC4334541 DNA ligase 1 4334541 Os03g0811500 3.7 3.2
 4.1
 -0.9
-1.0
 0.2
-0.4
 1.4
0.8
 1.2
0.0
47 LOC4329674 zinc finger CCCH domain-containing protein 16-like 4329674 OSNPB_020557500 3.7 2.2
 5.1
 0.7
 2.0
1.1
 1.4
0.3
 0.5
48 LOC9269932 uncharacterized LOC9269932 9269932 Os07g0607300 3.6 3.2
 4.1
 -1.5
 2.0
1.6
 2.3
1.6
 0.6
0.1
49 LOC9270747 dual specificity protein kinase zak2 9270747 Os01g0310500 3.6 3.4
 3.9



50 LOC4341804 peptidyl-prolyl cis-trans isomerase CYP59 4341804 Os06g0670500 3.6 1.4
 5.8
 0.5
 2.6
1.7
 1.8
1.1
 1.7
-0.1
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