Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4333568   protein WHAT'S THIS FACTOR 1 
 osa-r.5   4333568   protein WHAT'S THIS FACTOR 1 
 osa-m.8   4333568   protein WHAT'S THIS FACTOR 1 
 ath-u.4   AT4G24320   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-u.4   AT1G71850   Ubiquitin carboxyl-terminal hydrolase family protein 
 gma-u.4   121173733   protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 sly-u.4   101246929   protein WHAT'S THIS FACTOR 1 
 sly-u.4   101258604   protein WHAT'S THIS FACTOR 1 homolog 
 ppo-u.4   18104484   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ppo-u.4   18098311   protein WHAT'S THIS FACTOR 1 homolog 
 mtr-u.4   25496311   protein WHAT'S THIS FACTOR 9, mitochondrial 

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Top 50 coexpressed genes to 4333568 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3008   Ribosome biogenesis in eukaryotes  12 86 18.61
 osa240   Pyrimidine metabolism  1 63 -
 osa3018   RNA degradation  1 112 -
 osa1240   Biosynthesis of cofactors  1 248 -
 osa3010   Ribosome  3 353 -

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osa:LOC4333568 (protein WHAT'S THIS FACTOR 1) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4333568
osa-r.5
for
4333568
osa-m.8
for
4333568
ath-u.4
for
AT4G24320
ath-u.4
for
AT1G71850
gma-u.4
for
121173733
sly-u.4
for
101246929
sly-u.4
for
101258604
ppo-u.4
for
18104484
ppo-u.4
for
18098311
mtr-u.4
for
25496311
1 LOC4344057 probable protein arginine N-methyltransferase 3 4344057 OSNPB_070640000 7.3 5.9
 8.6
 0.5
 5.0
 8.0
7.3
 7.0
 0.5
 4.0
 1.9
 3.8
2 LOC4338325 proline-, glutamic acid- and leucine-rich protein 1 4338325 Os05g0295900 7.1 6.9
 7.2
 0.1
 6.8
 2.3
2.0
 5.8
 -0.1
 5.6
 1.5
 3.3
3.3
3 LOC4340741 H/ACA ribonucleoprotein complex subunit 2-like protein 4340741 Os06g0274200 7.1 6.5
 7.6
 -0.3
 4.3
 3.6
3.5
 4.5
 0.5
 3.6
 -0.1
 4.2
4 LOC4329832 ribosome biogenesis protein BRX1 homolog 2 4329832 Os02g0591800 7.0 5.1
 8.8
 0.7
0.3
 6.0
4.0
 3.8
0.8
 6.6
 -0.8
 2.7
0.8
 -0.1
-0.8
 4.3
3.5
5 LOC4332935 H/ACA ribonucleoprotein complex subunit 4 4332935 Os03g0370500 6.8 6.0
 7.6
 0.6
 5.6
 9.2
6.6
 6.6
 0.1
 7.6
7.0
 1.3
1.1
 9.2
6 LOC4329995 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like 4329995 OSNPB_020617700 6.8 3.8
 9.8
 2.9
 7.8
 5.8
 6.6
 1.7
 4.4
 1.0
 5.3
7 LOC4331735 TATA-binding protein-associated factor 2N 4331735 Os03g0166000 6.7 5.8
 7.6
 0.7
0.0
 1.7
1.2
 4.3
3.4
 5.2
3.3
 1.1
1.0
 3.0
3.0
 0.4
0.0
 3.6
2.7
8 LOC4325333 probable U3 small nucleolar RNA-associated protein 7 4325333 Os01g0183100 6.6 5.0
 8.2
 0.6
 10.2
 6.3
5.5
 5.8
 0.9
 4.7
3.0
 1.3
1.2
 3.9
9 LOC4343836 U3 small nucleolar RNA-associated protein 18 homolog 4343836 Os07g0603200 6.5 5.7
 7.4
 0.7
 6.1
 7.8
7.2
 5.6
 0.1
 3.8
 0.8
 3.6
2.1
10 LOC4331821 tubulin--tyrosine ligase-like protein 12 4331821 Os03g0179000 6.4 4.6
 8.3
 0.6
 2.7
 3.1
 5.5
 0.8
 1.6
 1.2
 2.6
11 LOC4333677 acidic leucine-rich nuclear phosphoprotein 32-related protein 2-like 4333677 OSNPB_030668900 6.4 4.7
 8.1







12 LOC4332567 WD repeat-containing protein 43 4332567 Os03g0300300 6.3 4.1
 8.5
 1.0
 7.9
 3.3
0.2
 2.8
 3.1
 5.1
 1.0
 3.3
13 LOC4330585 tRNA (guanine(9)-N1)-methyltransferase 4330585 Os02g0725600 6.3 6.3
 6.2
 0.3
 0.3
 2.0
1.1
 3.3
 0.6
 4.7
3.3
 1.2
1.0
 4.8
14 LOC4332049 mitochondrial substrate carrier family protein E 4332049 Os03g0213800 6.3 4.9
 7.6
 1.9
 3.5
 1.9

5.1
 1.4
 1.9
15 LOC4336046 NAP1-related protein 1-like 4336046 OSNPB_040459700 6.2 5.3
 7.1







16 LOC4342999 transcription termination factor MTEF18, mitochondrial 4342999 Os07g0409400 6.1 5.4
 6.9
 1.9
 3.0
 1.8
1.0
 1.4
 1.7
 2.7
 0.5
 2.2
0.8
17 LOC4331976 elongator complex protein 5 4331976 Os03g0201700 6.1 3.9
 8.3
 -0.1
 1.4
 0.4
-1.0
 2.3
 1.3
 2.1
0.3
 1.0
-0.4
 2.0
18 LOC4329957 pentatricopeptide repeat-containing protein At1g79540 4329957 Os02g0611400 6.0 7.0
 5.0
 0.8
 4.9
 6.6
3.9
 4.3
 1.2
 2.8
 0.8
 7.4
19 LOC4340910 uncharacterized protein At2g39795, mitochondrial 4340910 Os06g0326500 6.0 5.1
 6.8







20 LOC4344865 nucleolin 1-like 4344865 OSNPB_080192900 5.9 4.2
 7.6
 0.5
-0.2
 5.7
1.3
 7.5
6.9
 5.5
 -0.9
 5.2
3.9
 0.2
-0.5
 5.2
21 LOC4338984 uncharacterized protein At2g39795, mitochondrial 4338984 Os05g0456000 5.8 3.6
 7.9







22 LOC4328041 pentatricopeptide repeat-containing protein At2g37230 4328041 Os02g0110400 5.7 6.6
 4.9
 0.4
 6.3
 6.8
4.7
 7.9
 1.5
 4.8
 1.5
 7.5
23 LOC9268815 mediator-associated protein 2 9268815 Os08g0422600 5.7 7.3
0.7
 3.5
 1.6
1.1
 0.3
-0.6
 1.1
-0.1
 4.6
 0.7
 2.8
24 LOC4343215 probable rRNA-processing protein EBP2 homolog 4343215 Os07g0475800 5.7 4.2
 7.1
 -0.1
 5.5
 6.2
5.2
 7.6
7.1
 1.0
0.1
 4.9
 0.8
 6.0
2.8
25 LOC4334667 pumilio homolog 24 4334667 Os03g0831100 5.7 3.7
 7.6
 0.0
 6.5
 3.2
2.2
 5.2
 0.3
 4.3
3.7
 0.9
0.3
 4.2
26 LOC4343835 ras GTPase-activating protein-binding protein 2 4343835 Os07g0603100 5.6 4.2
 7.1







27 LOC4332851 nucleolar protein 56 4332851 Os03g0352300 5.6 4.7
 6.5
 0.8
0.2
 5.4
3.6
 7.3
6.1
 5.8
 0.1
 5.3
5.0
 1.4
1.1
 5.2
28 LOC4333495 U3 snoRNP-associated protein-like YAOH 4333495 OSNPB_030625900 5.6 4.8
 6.4
 -0.3
 7.8
 8.7
7.6
 6.8
 -0.1
 6.0
5.6
 1.2
0.9
 4.3
29 LOC4339582 ribosomal L1 domain-containing protein 1 4339582 Os05g0558000 5.6 5.5
 5.6
 1.1
1.0
 9.7
7.0
 8.5
8.1
 7.4
3.3
 1.6
1.1
 8.0
5.4
 1.4
0.9
 9.1
30 LOC4325739 uridine 5'-monophosphate synthase-like 4325739 OSNPB_010951200 5.5 5.7
 5.4
 -0.2
 2.3
 0.7
-1.0
 0.5
 0.2
 3.7
1.5
 1.6
1.4
 2.8
2.6
31 LOC4351621 pentatricopeptide repeat-containing protein At1g80270, mitochondrial 4351621 Os12g0170100 5.5 4.4
 6.7
 3.2
1.6
 9.3
6.4
 8.0
8.0
 4.2
 0.8
 5.2
5.2
 1.7
1.7
 6.6
6.0
32 LOC4332841 probable nucleolar protein 5-2 4332841 Os03g0350300 5.5 4.1
 6.9
 0.8
-0.2
 5.0
4.3
 6.6
5.7
 7.6
4.2
 0.4
-0.7
 5.4
4.9
 0.5
0.5
 5.2
5.0
33 LOC4351600 nucleolar protein 6 4351600 Os12g0166500 5.5 5.5
 5.4
 0.3
 6.4
 6.9
5.7
 5.0
 1.1
 4.6
 0.3
 4.1
34 LOC4352795 p21-activated protein kinase-interacting protein 1-like 4352795 Os12g0615900 5.5 4.1
 6.8
 0.1
 7.0
 5.9
5.0
 5.1
 0.5
 3.4
 1.5
 4.3
35 LOC4343020 uncharacterized LOC4343020 4343020 Os07g0415200 5.5 5.2
 5.7
 -0.5
 2.3
 3.2
2.5
 1.3
 -1.4
 1.3
 0.5
 3.8
36 LOC4327104 50S ribosomal protein L3-2, chloroplastic 4327104 Os01g0251100 5.5 4.9
 6.0
 1.4
 5.4
 5.8
5.3
 0.7
 1.1
 4.2
2.9
 1.0
0.8
 2.8
2.8
37 LOC4325442 guanine nucleotide-binding protein-like NSN1 4325442 Os01g0375000 5.4 4.9
 6.0
 0.1
 4.5
 6.5
3.2
 7.2
3.7
 0.6
0.2
 4.0
 -0.0
 4.3
38 LOC4330066 pentatricopeptide repeat-containing protein At4g36680, mitochondrial 4330066 Os02g0633200 5.4 4.7
 6.1
 4.1
4.1
 7.7
7.5
 5.3
4.9
 6.4
6.1
 1.9
1.8
 7.4
5.1
 2.5
2.4
 5.3
0.6
39 LOC4340089 protein arginine N-methyltransferase PRMT10-like 4340089 OSNPB_060142800 5.4 5.0
 5.7
 -0.3
 1.1
 2.5
1.6
 1.3
 -0.9
 0.9
 -1.0
 3.0
40 LOC4324473 mitochondrial-processing peptidase subunit alpha 4324473 Os01g0966300 5.3 3.5
 7.2







41 LOC4339641 putative rRNA methyltransferase 4339641 Os05g0567400 5.3 4.9
 5.8
 0.8
 6.4
 6.1
4.8
 6.2
4.4
 0.9
0.8
 6.3
 0.9
 6.9
42 LOC4332840 probable nucleolar protein 5-2 4332840 Os03g0350100 5.3 3.3
 7.2
 0.8
-0.2
 5.0
4.3
 6.6
5.7
 7.6
4.2
 0.4
-0.7
 5.4
4.9
 0.5
0.5
 5.2
5.0
43 LOC4338806 protease Do-like 10, mitochondrial 4338806 Os05g0417100 5.2 3.6
 6.8
 1.2
 1.9
 3.3
 4.4
 1.5
 2.7
 0.5
 2.1
44 LOC4346047 transcription termination factor MTEF18, mitochondrial 4346047 Os08g0518200 5.2 5.3
 5.1
 2.2
1.5
 2.8
2.6
 6.2
1.7
 3.1
0.5
 1.2
1.1
 2.7
0.1
 1.9
1.4
 2.9
2.1
45 LOC4331181 mediator of RNA polymerase II transcription subunit 36a 4331181 Os02g0821800 5.2 4.2
 6.1
 0.6
-0.0
 5.2
2.4
 8.1
6.2
 5.1
 -1.2
 5.4
5.2
 -0.2
-0.4
 4.6
3.1
46 LOC9266900 ribonuclease H2 subunit B 9266900 Os04g0476400 5.1 4.8
 5.4
 1.7
 0.0
 -1.0
 0.1
 -0.4
 0.6
 -0.5
 1.6
47 LOC4350782 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 4350782 Os11g0579800 5.1 5.9
 4.4
 0.6
 2.0
 5.6
3.5
 3.6
 -0.1
 5.7
5.2
 0.4
-0.0
 4.7
48 LOC4343805 pentatricopeptide repeat-containing protein At4g21705, mitochondrial 4343805 Os07g0598500 5.1 4.0
 6.2
 2.2
 3.0
 3.1
-0.2
 4.7
4.4
 1.0
0.9
 2.5
0.7
 0.6
0.5
 2.4
1.1
49 LOC4329381 40S ribosomal protein S8-like 4329381 OSNPB_020489400 5.1 4.9
 5.3
 -0.4
-0.6
 2.2
-1.1
 4.2
4.2
 3.9
3.1
 0.6
0.5
 2.7
2.6
 0.7
0.3
 2.6
1.7
50 LOC4328064 RNA-binding protein NOB1 4328064 Os02g0114700 5.1 4.5
 5.7
 -0.3
 3.4
 5.0
3.9
 1.2
 1.0
 5.2
 0.2
 3.3
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