Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4333747   uncharacterized tRNA/rRNA methyltransferase YsgA 
 osa-r.5   4333747   uncharacterized tRNA/rRNA methyltransferase YsgA 
 osa-m.8   4333747   uncharacterized tRNA/rRNA methyltransferase YsgA 
 ath-u.4   AT4G38020   tRNA/rRNA methyltransferase (SpoU) family protein 
 gma-u.4   100792782   uncharacterized LOC100792782 
 sly-u.4   101251838   uncharacterized tRNA/rRNA methyltransferase YsgA 
 ppo-u.4   7476427   uncharacterized tRNA/rRNA methyltransferase YsgA 
 mtr-u.4   11441513   uncharacterized tRNA/rRNA methyltransferase slr1673 

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Top 50 coexpressed genes to 4333747 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  6 336 4.14
 osa780   Biotin metabolism  1 23 -
 osa61   Fatty acid biosynthesis  1 47 -
 osa1212   Fatty acid metabolism  1 79 -
 osa970   Aminoacyl-tRNA biosynthesis  1 117 -

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osa:LOC4333747 (uncharacterized tRNA/rRNA methyltransferase YsgA) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4333747
osa-r.5
for
4333747
osa-m.8
for
4333747
ath-u.4
for
AT4G38020
gma-u.4
for
100792782
sly-u.4
for
101251838
ppo-u.4
for
7476427
mtr-u.4
for
11441513
1 LOC4334445 probable GTP-binding protein OBGC2 4334445 OSNPB_030799700 6.1 3.5
 8.6
3.0
2.7
 4.1
 0.6
 1.6
2 LOC4339764 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 4339764 Os05g0587200 5.9 4.5
 7.3
 6.0
 2.0
0.9
 3.3
 1.2
 2.5
3 LOC4334632 transcription termination/antitermination protein NusG 4334632 Os03g0825500 5.9 3.1
 8.6
 5.5
 2.2
 3.3
 2.3
 2.1
4 LOC4339632 uncharacterized LOC4339632 4339632 Os05g0566300 5.6 4.9
 6.3
 6.2
 1.5
1.0
 3.7
 0.1
 1.8
5 LOC4328994 proteinaceous RNase P 1, chloroplastic/mitochondrial 4328994 Os02g0273800 5.6 4.0
 7.1
1.4
 1.9
 0.6
 1.6
6 LOC4325987 uncharacterized lipoprotein syc1174_c 4325987 Os01g0127400 5.6 5.1
 6.0
1.6
 3.4
 0.9
 1.3
7 LOC4346938 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic 4346938 OSNPB_090382400 5.6 3.7
 7.5
 6.3
 3.3
 4.2
 2.2
 2.2
8 LOC4339922 superoxide dismutase [Fe] 1, chloroplastic-like 4339922 OSNPB_060115400 5.5 5.1
 6.0
 4.8
1.4
 1.4
1.1
 1.4
0.9
 3.5
0.1
 0.8
9 LOC4328072 uncharacterized LOC4328072 4328072 Os02g0115600 5.5 5.4
 5.5
 3.5
 0.6
 3.2
 -0.6
 1.9
10 wsl6 white stripe leaf6 9271571 OSNPB_050567300 5.5 4.3
 6.6
 4.6
 2.1
0.0
 2.9
 0.2
 1.4
11 LOC4342438 RNA-binding protein CP33, chloroplastic 4342438 Os07g0158300 5.4 4.6
 6.2
 2.5
 1.7
1.4
 1.5
 1.1
0.6
 0.4
0.3
12 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 5.4 4.6
 6.2
 1.2
 0.0
-0.4
 1.8
 1.4
 1.0
13 LOC4343647 uncharacterized LOC4343647 4343647 Os07g0568900 5.4 3.2
 7.6




14 LOC4352538 psbP domain-containing protein 1, chloroplastic 4352538 Os12g0564400 5.4 5.5
 5.3
 1.6
 -0.4
 2.8
 0.9
0.8
 0.8
15 LOC4331225 uncharacterized LOC4331225 4331225 Os02g0827600 5.4 3.8
 6.9
 5.9
 2.4
2.1
 1.7
 1.6
 2.8
16 LOC4333591 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial-like 4333591 OSNPB_030651000 5.4 4.5
 6.2
 2.6
 1.8
0.5
 2.7
 0.1
 1.2
17 LOC4351767 uncharacterized protein ycf45 4351767 Os12g0209000 5.4 3.3
 7.4
 4.0
 1.4
 0.3
2.2
18 LOC4331470 uncharacterized LOC4331470 4331470 Os03g0126300 5.3 4.6
 6.1
 2.0
 0.3
 0.8
 2.6
 1.3
19 LOC4335917 uncharacterized LOC4335917 4335917 Os04g0438300 5.3 3.3
 7.3
 4.6
 2.5
1.9
2.2
 2.3
20 LOC9270258 protease Do-like 2, chloroplastic 9270258 Os05g0147500 5.1 3.9
 6.3
 1.4
 2.0
1.1
 2.8
1.6
 1.2
1.1
 2.4
21 LOC4333618 transcription antitermination protein NusB 4333618 Os03g0656900 5.1 5.7
 4.5
 4.7
 0.9
0.4
 2.0
 0.9
 2.3
22 LOC4330964 uncharacterized LOC4330964 4330964 Os02g0788500 5.1 4.3
 5.8
 4.3
 1.5
0.4
 2.4
 2.6
1.5
 2.4
23 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 5.1 5.1
 5.0
 2.0
 1.4
0.6
 2.8
 1.5
 0.6
24 LOC4346032 transcription termination factor MTERF6, chloroplastic/mitochondrial 4346032 Os08g0515800 5.1 4.2
 5.9
 3.3
 0.8
0.5
 2.3
 1.4
 0.4
25 LOC4343349 methionine aminopeptidase 1B, chloroplastic 4343349 Os07g0510100 5.0 4.6
 5.4
 5.6
 3.6
2.0
 2.3
 0.2
 2.6
26 LOC4324472 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 4324472 Os01g0966200 5.0 3.0
 7.0
 1.5
 1.8
1.1
 1.3
 1.1
 1.5
27 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 5.0 4.5
 5.5
 4.6
3.8
 2.2
1.3
 1.3
1.2
 1.7
1.7
 2.0
0.7
28 LOC4335962 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic 4335962 Os04g0445700 4.9 5.1
 4.8
 -0.8
 0.0
-0.0
 1.2
1.1
 3.2
1.6
 -1.1
-1.1
29 LOC4338780 uncharacterized protein Cbei_0202 4338780 Os05g0411200 4.9 3.7
 6.2
 2.7
 2.7
0.6
 2.2
 0.4
 1.3
30 LOC4346927 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 4346927 Os09g0380200 4.9 3.3
 6.5
 3.2
 4.2
1.9
 3.2
 3.7
 3.6
31 LOC4334131 50S ribosomal protein L6, chloroplastic 4334131 Os03g0751400 4.9 4.8
 5.0
 1.2
 0.0
-0.4
 1.8
 1.4
 1.0
32 LOC4344522 28 kDa ribonucleoprotein, chloroplastic 4344522 Os08g0117100 4.9 4.2
 5.5
 3.5
 0.9
0.4
2.9
33 LOC4331439 nascent polypeptide-associated complex subunit alpha-like protein 1 4331439 Os03g0121700 4.9 4.5
 5.3
 2.5
0.4
 0.4
0.3
 0.8
-0.0
 1.9
1.4
 2.4
1.3
34 LOC4342081 RNA pseudouridine synthase 2, chloroplastic-like 4342081 OSNPB_060717400 4.9 3.3
 6.4
 2.4
 0.1
 2.4
 1.8
 1.6
35 LOC4325462 uncharacterized protein At2g39795, mitochondrial 4325462 Os01g0143800 4.9 4.0
 5.7




36 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 4.8 4.0
 5.6
 1.3
0.9
 1.9
 1.4
1.1
 1.7
0.4
 1.6
37 LOC4324772 5'-3' exonuclease 4324772 Os01g0874800 4.8 4.7
 4.9
 5.8
 2.3
 2.2
 -0.1
 1.8
38 LOC4333900 uncharacterized LOC4333900 4333900 Os03g0713200 4.8 3.5
 6.1
1.0
0.2
 2.1
 -0.1
39 LOC4330746 photosynthetic NDH subunit of lumenal location 4, chloroplastic 4330746 Os02g0751600 4.8 3.1
 6.5
 -0.9
 -0.2
0.3
 1.1
40 LOC4324255 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 4324255 Os01g0705300 4.8 4.1
 5.5
 3.7
 2.6
2.0
 2.5
 1.8
 2.2
41 LOC4333096 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 4333096 Os03g0411500 4.8 4.3
 5.3
 5.0
 2.4
2.0
 3.9
 1.2
0.9
 1.8
42 LOC4346605 30S ribosomal protein 2, chloroplastic 4346605 Os09g0279500 4.8 5.0
 4.6
 3.5
 1.9
0.7
0.7
 1.0
43 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 4.8 3.4
 6.1
 1.6
 0.8
0.7
 3.2
 1.3
0.4
 2.6
44 LOC4343643 protein TIC 20-I, chloroplastic 4343643 Os07g0568500 4.7 4.3
 5.1
1.6
0.8
 2.9
1.3
 1.7
1.7
 1.5
45 LOC4331459 50S ribosomal protein L5, chloroplastic-like 4331459 OSNPB_030125000 4.7 4.1
 5.4
 2.3
 1.7
1.5
 3.3
 3.3
2.4
 0.9
46 LOC4334555 50S ribosomal protein L17, chloroplastic 4334555 Os03g0815400 4.7 3.8
 5.6
 2.3
 0.7
0.3
 3.1
2.3
 2.0
1.1
 0.4
47 LOC4339930 uncharacterized LOC4339930 4339930 Os06g0116400 4.7 4.0
 5.3
 0.5
-1.0
 3.0
1.4
 0.5
0.5
 1.8
0.7
 -0.6
48 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 4.7 4.2
 5.1
 2.2
 1.9
 4.9
1.9
 0.8
0.5
 0.7
49 LOC4343267 peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic 4343267 Os07g0490400 4.6 3.0
 6.2
 4.9
 1.8
1.6
 2.7
 1.8
 2.2
50 LOC4324026 protein FLUORESCENT IN BLUE LIGHT, chloroplastic 4324026 Os01g0510600 4.6 4.6
 4.6
 4.2
 3.0
2.3
 2.9
1.6
 1.5
 1.4
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