Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4333869   zinc finger protein VAR3, chloroplastic 
 osa-r.5   4333869   zinc finger protein VAR3, chloroplastic 
 osa-m.8   4333869   zinc finger protein VAR3, chloroplastic 
 ath-u.4   AT1G48570   zinc finger (Ran-binding) family protein 
 gma-u.4   100819532   zinc finger protein VAR3, chloroplastic 
 gma-u.4   100811037   zinc finger protein VAR3, chloroplastic 
 sly-u.4   101250201   zinc finger protein VAR3, chloroplastic 
 ppo-u.4   7493489   uncharacterized LOC7493489 
 mtr-u.4   11422224   zinc finger protein VAR3, chloroplastic 

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Top 50 coexpressed genes to 4333869 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3008   Ribosome biogenesis in eukaryotes  6 86 7.58
 osa3018   RNA degradation  3 107 2.83
 osa3020   RNA polymerase  2 52 2.27
 osa250   Alanine, aspartate and glutamate metabolism  1 53 -
 osa240   Pyrimidine metabolism  1 63 -

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osa:LOC4333869 (zinc finger protein VAR3, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4333869
osa-r.5
for
4333869
osa-m.8
for
4333869
ath-u.4
for
AT1G48570
gma-u.4
for
100819532
gma-u.4
for
100811037
sly-u.4
for
101250201
ppo-u.4
for
7493489
mtr-u.4
for
11422224
1 LOC4351433 U3 small nucleolar ribonucleoprotein protein MPP10 4351433 Os12g0133900 8.6 6.8
 10.3
 4.1
 4.6
2.6
 3.3
2.9
 4.6
 2.9
2.6
 7.1
2 LOC4329995 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like 4329995 OSNPB_020617700 8.0 8.4
 7.7
 7.5
 3.7
 2.4
 6.8
 1.8
 9.4
3 LOC4351600 nucleolar protein 6 4351600 Os12g0166500 7.7 6.6
 8.8
 6.3
 5.3
4.6
 3.4
3.3
 6.5
 1.7
 5.9
4 LOC4344057 probable protein arginine N-methyltransferase 3 4344057 OSNPB_070640000 7.6 7.6
 7.7
 5.9
 4.1
2.9
 3.2
2.8
 6.2
 2.3
 6.4
5 LOC4325041 DNA repair protein recA homolog 3, mitochondrial 4325041 Os01g0901200 7.6 6.4
 8.8
 3.9
 0.2
-0.0
 1.2
0.8
 5.4
 2.0
-0.4
 4.0
3.7
6 LOC4333495 U3 snoRNP-associated protein-like YAOH 4333495 OSNPB_030625900 7.6 7.5
 7.7
 4.2
 3.9
3.6
 4.8
4.0
 5.9
 2.6
2.1
 6.4
7 LOC4332567 WD repeat-containing protein 43 4332567 Os03g0300300 6.9 6.7
 7.0
 6.6
 2.5
2.1
 3.5
2.9
 1.5
 2.8
 4.3
8 LOC4330356 UPF0160 protein C694.04c 4330356 Os02g0686600 6.9 7.0
 6.7
 6.7
4.1
 4.7
4.6
 4.0
3.8
 5.9
 -0.0
 4.5
9 LOC4328227 myb-binding protein 1A-like protein 4328227 Os02g0135700 6.6 4.9
 8.2
 5.2
 2.7
1.6
 2.8
2.4
 3.4
3.2
 1.7
1.4
 4.8
10 LOC4345071 aspartate carbamoyltransferase, chloroplastic-like 4345071 OSNPB_080248800 6.5 5.6
 7.5
 3.8
 1.8
1.0
 1.7
1.5
 6.6
 2.9
 5.1
-1.6
11 LOC4347787 25S rRNA (cytosine-C(5))-methyltransferase nop2 4347787 Os09g0551300 6.5 6.5
 6.5
 6.4
4.0
 3.1
2.8
 3.5
3.4
 4.9
2.1
 1.3
 5.5
12 LOC4325458 uncharacterized protein At2g39795, mitochondrial 4325458 Os01g0143300 6.5 5.4
 7.6
 6.0
5.5
 3.5
3.4
 4.0
3.9
 5.7
 1.3
1.3
 9.8
6.2
13 LOC4331367 uncharacterized LOC4331367 4331367 Os03g0111800 6.4 5.8
 7.1
 0.3
 3.3
 2.5
 2.4
 1.8
 4.9
14 LOC4332840 probable nucleolar protein 5-2 4332840 Os03g0350100 6.4 6.3
 6.5
 4.3
3.4
 3.2
2.6
 3.3
2.5
 6.2
3.1
 2.6
1.7
 5.8
5.4
15 LOC4334824 exosome complex exonuclease RRP46 homolog 4334824 OSNPB_030854200 6.3 6.8
 5.8
 3.8
 1.4
1.3
 1.8
1.7
 2.3
 0.4
0.4
 1.6
16 LOC4336241 ribosome-recycling factor 4336241 Os04g0490400 6.3 5.9
 6.8
 5.6
 2.6
 1.7
 6.4
 1.2
 3.8
17 LOC4331982 uncharacterized LOC4331982 4331982 Os03g0203100 6.2 5.9
 6.6
 4.7
 3.8
3.5
 3.6
2.7
 5.2
 2.2
 4.1
18 LOC4335968 peptidyl-prolyl cis-trans isomerase FKBP53 4335968 Os04g0446500 6.2 6.7
 5.8
 4.2
3.7
 5.1
2.8
 4.2
3.2
 6.1
1.5
 2.9
2.3
 6.1
4.8
19 LOC4352279 glycine-rich RNA-binding protein blt801 4352279 Os12g0502200 6.2 5.4
 7.0
 6.2
3.1
 4.4
4.4
 4.0
3.2
 5.2
4.9
 1.8
1.0
 6.2
5.4
20 LOC4342999 transcription termination factor MTEF18, mitochondrial 4342999 Os07g0409400 6.1 5.3
 6.9
 -0.0
 2.8
1.5
 1.7
1.4
 -0.0
 1.8
 1.5
-0.7
21 LOC4343142 tetratricopeptide repeat protein 27 homolog 4343142 Os07g0455100 6.1 5.5
 6.7
 7.9
2.1
 4.8
4.7
 3.6
2.9
 5.0
 2.0
 6.2
22 LOC4333677 acidic leucine-rich nuclear phosphoprotein 32-related protein 2-like 4333677 OSNPB_030668900 6.1 5.5
 6.6





23 LOC4346491 DNA-directed RNA polymerase 1B, mitochondrial 4346491 Os09g0246200 6.1 6.3
 5.8
 9.9
4.7
 7.3
5.0
 4.3
3.8
 4.6
4.6
 3.2
3.2
 8.3
7.2
24 LOC9270208 protein RRP6-like 2 9270208 Os10g0437200 6.0 5.3
 6.8
 2.7
1.8
 1.8
-0.1
 1.4
0.6
 1.1
 2.1
1.7
 2.3
1.8
25 LOC4330409 ATPase family AAA domain-containing protein 3-B 4330409 Os02g0697600 6.0 6.8
 5.2
 6.7
6.6
 3.7
3.2
 3.7
2.8
 4.2
 1.5
0.5
 6.9
6.5
26 LOC4346843 probable protein arginine N-methyltransferase 1 4346843 OSNPB_090359800 6.0 4.9
 7.0
 5.5
4.5
 2.9
2.6
 3.1
2.3
 4.4
3.8
 0.8
0.5
 7.3
27 LOC4351580 nucleolar complex protein 2 homolog 4351580 Os12g0163200 5.9 5.2
 6.6
 6.3
 4.0
 3.7
 3.4
 1.7
 6.5
28 LOC4345386 putative methyltransferase NSUN6 4345386 Os08g0365900 5.9 4.2
 7.5
 7.6
 1.6
 1.4
 1.8
 1.0
 2.9
29 LOC4332851 nucleolar protein 56 4332851 Os03g0352300 5.9 5.3
 6.4
 4.5
1.4
 4.4
3.9
 3.7
3.3
 5.8
 3.2
2.1
 6.7
30 LOC4343805 pentatricopeptide repeat-containing protein At4g21705, mitochondrial 4343805 Os07g0598500 5.8 4.4
 7.2
 2.0
 2.5
-0.9
 2.2
-0.8
 4.4
3.9
 1.1
0.0
 3.8
3.7
31 LOC4350404 pentatricopeptide repeat-containing protein At3g49240, mitochondrial 4350404 Os11g0433600 5.8 4.9
 6.6
5.9
4.6
 4.5
3.6
 4.4
 2.5
 8.6
2.0
32 LOC4339823 histone deacetylase HDT2 4339823 Os05g0597100 5.8 5.9
 5.7
 6.2
4.2
 4.0
3.5
 3.5
3.4
 5.4
4.3
 2.2
0.1
 3.7
0.8
33 LOC4344865 nucleolin 1-like 4344865 OSNPB_080192900 5.8 5.7
 5.9
 4.6
-0.2
 5.4
4.8
 4.2
4.1
 6.5
 1.7
1.6
 6.5
34 LOC4324473 mitochondrial-processing peptidase subunit alpha 4324473 Os01g0966300 5.8 4.8
 6.7





35 LOC4340910 uncharacterized protein At2g39795, mitochondrial 4340910 Os06g0326500 5.8 5.4
 6.1





36 LOC4346646 uncharacterized LOC4346646 4346646 Os09g0296400 5.7 5.9
 5.6
 4.0
 6.5
 3.9
 -0.7
 0.4
 7.9
37 LOC4326297 something about silencing protein 10 4326297 Os01g0104800 5.7 5.5
 6.0
 3.7
 3.9
0.8
 1.9
1.0
 3.4
0.1
 2.7
 2.6
38 LOC9270399 DNA-directed RNA polymerase I subunit 1 9270399 Os06g0612200 5.7 7.3
3.6
 4.4
 3.7
 6.3
 2.3
 7.4
39 LOC4335144 pumilio homolog 3 4335144 Os04g0201200 5.7 5.5
 5.9





40 LOC4349873 uncharacterized LOC4349873 4349873 Os11g0167300 5.7 5.1
 6.3
 6.0
4.2
 4.2
3.4
 3.6
3.1
 5.3
 2.8
1.7
 9.1
41 LOC4352760 WD repeat-containing protein 75 4352760 Os12g0609800 5.7 5.7
 5.7
 7.7
 3.7
2.2
 3.2
3.2
 6.1
 2.5
2.0
 4.0
42 LOC4342673 rRNA biogenesis protein RRP5 4342673 Os07g0203300 5.7 4.2
 7.1
 6.4
 4.9
4.6
 5.6
3.7
 6.1
 1.5
 5.8
43 LOC4330465 ATPase family AAA domain-containing protein 3C 4330465 Os02g0706500 5.7 5.8
 5.6
 6.9
6.8
 4.1
3.2
 3.7
3.2
 6.3
 2.2
 6.5
44 LOC4334667 pumilio homolog 24 4334667 Os03g0831100 5.7 5.3
 6.0
 5.4
 4.3
2.4
 4.4
2.9
 6.0
 1.8
1.4
 5.8
45 LOC4342742 pentatricopeptide repeat-containing protein At1g80270, mitochondrial 4342742 Os07g0222700 5.6 5.2
 6.1
 6.5
5.5
 5.4
3.8
 3.4
3.3
 5.1
 2.4
1.5
 11.1
8.9
46 LOC4342672 uncharacterized LOC4342672 4342672 Os07g0202900 5.6 5.6
 5.7
 6.4
 5.8
3.5
 4.3
3.5
 4.6
 0.9
 5.3
47 LOC4340089 protein arginine N-methyltransferase PRMT10-like 4340089 OSNPB_060142800 5.6 5.5
 5.8
 2.2
 2.0
1.4
 2.5
2.5
 5.2
 -0.0
 5.0
48 LOC9270457 DNA-directed RNA polymerase I subunit 2 9270457 Os10g0495600 5.6 7.0
4.6
 3.9
2.8
 2.0
0.7
 6.2
 1.5
 9.3
49 LOC4341246 50S ribosomal protein L1 4341246 Os06g0546400 5.6 5.7
 5.5
 6.8
 3.5
2.1
 4.2
3.7
 6.9
 0.7
 7.2
50 LOC4343611 elongator complex protein 1 4343611 Os07g0563700 5.6 4.5
 6.6
 2.1
 1.8
 1.0
 3.7
 1.7
0.8
 4.4
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