Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4334566   pentatricopeptide repeat-containing protein At2g41080 
 osa-r.5   4334566   pentatricopeptide repeat-containing protein At2g41080 
 osa-m.8   4334566   pentatricopeptide repeat-containing protein At2g41080 
 ath-u.4   AT2G41080   pentatricopeptide (PPR) repeat protein 
 gma-u.4   100777161   pentatricopeptide repeat-containing protein At2g41080 
 sly-u.4   101267037   pentatricopeptide repeat-containing protein At2g41080 
 ppo-u.4   7469970   pentatricopeptide repeat-containing protein At2g41080 
 mtr-u.4   25493411   pentatricopeptide repeat-containing protein At2g41080 

close


Top 50 coexpressed genes to 4334566 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa380   Tryptophan metabolism  1 60 -
 osa240   Pyrimidine metabolism  1 63 -
 osa51   Fructose and mannose metabolism  1 64 -
 osa230   Purine metabolism  1 91 -
 osa480   Glutathione metabolism  1 114 -

close


osa:LOC4334566 (pentatricopeptide repeat-containing protein At2g41080) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4334566
osa-r.5
for
4334566
osa-m.8
for
4334566
ath-u.4
for
AT2G41080
gma-u.4
for
100777161
sly-u.4
for
101267037
ppo-u.4
for
7469970
mtr-u.4
for
25493411
1 LOC4338983 pentatricopeptide repeat-containing protein At2g27610 4338983 Os05g0455900 4.5 3.4
 5.7
 4.1
 4.0
 3.8

2 LOC4331539 uncharacterized LOC4331539 4331539 Os03g0135800 4.0 3.9
 4.0




3 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 4.0 3.6
 4.4
4.8
 4.4
3.2
4 LOC4324319 pentatricopeptide repeat-containing protein At3g29230 4324319 Os01g0912900 3.8 2.3
 5.2




5 LOC4349574 pentatricopeptide repeat-containing protein At3g09040, mitochondrial 4349574 Os11g0109800 3.7 5.6





6 LOC4349672 non-structural maintenance of chromosomes element 1 homolog 4349672 Os11g0130300 3.7 4.0
 3.4
 0.7
 0.2
 0.2
 -0.5
 -0.6
7 LOC4337804 pentatricopeptide repeat-containing protein At3g05340 4337804 Os05g0147600 3.6 3.2
 4.0
 4.7
 7.0
 4.6
 1.8
 1.6
8 LOC4334193 pentatricopeptide repeat-containing protein At1g77360, mitochondrial 4334193 Os03g0761300 3.5 3.4
 3.5
 2.8
 1.1
 -0.1
 2.2
 1.4
9 LOC4344035 pentatricopeptide repeat-containing protein At5g48910 4344035 Os07g0636900 3.3 2.3
 4.3




10 LOC4350793 pentatricopeptide repeat-containing protein At4g14850 4350793 Os11g0583300 3.2 1.3
 5.1
 4.1
 7.0
 6.6
3.2
2.1
11 LOC4339672 pentatricopeptide repeat-containing protein At5g39680 4339672 Os05g0572900 3.1 3.1
 3.1
 3.4
 4.4
 2.2
2.8
12 LOC4351313 pentatricopeptide repeat-containing protein At4g18840 4351313 Os12g0114400 3.1 2.7
 3.5
8.4


13 LOC4327605 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 4327605 Os01g0819800 3.1 3.5
 2.7
 6.7
 3.9
 5.0
2.7
14 LOC4334515 probable cellulose synthase A catalytic subunit 2 [UDP-forming] 4334515 OSNPB_030808100 3.0 2.1
 3.9
 0.0
-0.1
 0.6
0.3
 0.3
-0.8
 0.9
0.8
 0.6
0.6
15 LOC4328019 putative pentatricopeptide repeat-containing protein At1g68930 4328019 Os02g0106300 3.0 2.4
 3.6
 4.2
 7.0
 2.6
 4.8
 3.4
0.2
16 LOC4333574 GTPase LSG1-2 4333574 Os03g0647500 2.9 3.8
 2.1
 1.1
0.5
 2.0
2.0
 0.4
 -0.4
 1.3
17 LOC4350047 putative F-box/LRR-repeat protein At5g02930 4350047 Os11g0209600 2.9 2.5
 3.4




18 LOC107281153 uncharacterized LOC107281153 107281153 2.9 4.0





19 LOC4342698 polygalacturonase-like 4342698 Os07g0208100 2.9 2.8
 3.0
 -0.3
-0.6
0.3
 0.6
-0.1
 -0.5
20 LOC4331709 probable indole-3-pyruvate monooxygenase YUCCA7 4331709 Os03g0162000 2.9 2.9
 2.8




21 LOC4351448 mitochondrial acidic protein MAM33 4351448 Os12g0136600 2.9 2.8
 2.9
 -0.8
 1.3
1.1
-1.0
 1.1
22 LOC4329827 uncharacterized LOC4329827 4329827 2.8 3.5
 2.2




23 LOC4341523 putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 4341523 2.8 3.7

1.6

2.4
24 LOC4329094 zinc finger MYM-type protein 1 4329094 Os02g0301400 2.7 3.1
 2.4



1.1
25 LOC4328015 uncharacterized LOC4328015 4328015 Os02g0105800 2.7 3.3
 2.1




26 LOC9270751 putative disease resistance protein RGA1 9270751 Os01g0149350 2.6 2.3
 3.0




27 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 2.6 2.2
 3.1




28 LOC9272231 DEAD-box ATP-dependent RNA helicase FANCM 9272231 Os11g0180600 2.6 3.9
-0.3
 2.1
 -1.0
 2.1
 0.0
29 LOC4342673 rRNA biogenesis protein RRP5 4342673 Os07g0203300 2.6 3.2
 2.1
 0.8
 5.6
4.5
 3.3
 2.5
 3.4
30 LOC9267684 F-box protein At3g59000 9267684 Os08g0197400 2.6 1.5
 3.7




31 LOC4347812 pentatricopeptide repeat-containing protein At2g22410, mitochondrial 4347812 Os09g0555400 2.6 2.6
 2.6



3.7
32 LOC9267933 uncharacterized LOC9267933 9267933 Os11g0549610 2.6 4.2





33 LOC4349615 mannan endo-1,4-beta-mannosidase 7-like 4349615 OSNPB_110118200 2.6 1.5
 3.6
 0.6
 -0.1
-0.3
 -0.3
 0.1
-0.9
 -0.4
-0.9
34 LOC4336870 cell division cycle 20.2, cofactor of APC complex 4336870 Os04g0599800 2.6 2.6
 2.5
 -0.1
-0.1
 1.3
0.1
 0.1
-1.2
 0.5
-0.1
 1.3
0.5
35 LOC4346006 putative pentatricopeptide repeat-containing protein At3g05240 4346006 Os08g0511000 2.5 2.0
 3.1



2.4
36 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 2.5 1.6
 3.5
8.3
6.3
 3.6

37 LOC9271530 pentatricopeptide repeat-containing protein At3g29230 9271530 Os01g0914600 2.5 3.8
 1.3




38 LOC9267687 pentatricopeptide repeat-containing protein At5g43790 9267687 Os12g0128200 2.5 2.5
 2.5
 1.6
4.8
1.6
39 LOC4331821 tubulin--tyrosine ligase-like protein 12 4331821 Os03g0179000 2.5 3.3
 1.8
 0.7
 1.6
 2.5
 1.2
 1.9
40 LOC4335578 single-stranded DNA-binding protein, mitochondrial 4335578 Os04g0363700 2.5 1.9
 3.1
 0.9
 2.3
1.0
 5.1
 1.9
 3.1
41 LOC4335909 pentatricopeptide repeat-containing protein At3g26540-like 4335909 Os04g0436800 2.5 2.3
 2.7
 6.1
 5.5
 5.5
2.4
42 LOC4332901 sugar transporter ERD6-like 16 4332901 Os03g0363600 2.5 2.9
 2.1
 0.7
0.1
 0.7
0.3
 1.2
0.5
 0.3
-0.2
 -0.4
-0.5
43 LOC4345655 pentatricopeptide repeat-containing protein At3g47530 4345655 Os08g0434000 2.5 1.5
 3.4
 3.9
 6.1
 4.0
3.5
44 LOC4327598 putative pentatricopeptide repeat-containing protein At5g40405 4327598 Os01g0814300 2.4 1.4
 3.5

4.1

45 LOC4325761 phytochromobilin:ferredoxin oxidoreductase, chloroplastic 4325761 Os01g0949400 2.4 1.2
 3.7
 1.1
 -0.4
 0.6
 0.7
 0.9
46 LOC4339616 E3 SUMO-protein ligase MMS21 4339616 Os05g0563500 2.4 1.7
 3.1
 0.5
1.0
 -0.2
 -0.1
47 LOC4331590 chaperonin CPN60-1, mitochondrial 4331590 Os03g0143400 2.4 2.6
 2.2
 0.9
0.5
 5.5
4.5
 4.8
2.8
 1.7
1.5
 2.7
2.0
48 LOC4344729 pentatricopeptide repeat-containing protein At4g22760 4344729 Os08g0162200 2.4 2.1
 2.7
 3.1
0.1
 1.5
 3.3
49 LOC4340258 ribonucleoside-diphosphate reductase large subunit 4340258 Os06g0168600 2.4 2.0
 2.8
 -0.2
 2.2
1.3
 1.7
1.6
 2.0
0.4
 1.1
0.8
50 LOC4332013 putative pentatricopeptide repeat-containing protein At1g02420 4332013 Os03g0208600






The preparation time of this page was 1.6 [sec].