Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4336824   31 kDa ribonucleoprotein, chloroplastic 
 osa-r.5   4336824   31 kDa ribonucleoprotein, chloroplastic 
 osa-m.8   4336824   31 kDa ribonucleoprotein, chloroplastic 
 ath-u.4   AT2G35410   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.4   100793319   RNA-binding domain-containing protein 
 gma-u.4   100792275   29 kDa ribonucleoprotein, chloroplastic 
 sly-u.4   101245785   28 kDa ribonucleoprotein, chloroplastic 
 ppo-u.4   18094157   28 kDa ribonucleoprotein, chloroplastic 
 mtr-u.4   11430294   RNA-binding protein CP31B, chloroplastic 

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Top 50 coexpressed genes to 4336824 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  12 336 11.40
 osa1240   Biosynthesis of cofactors  5 233 3.89
 osa860   Porphyrin metabolism  4 42 5.74
 osa130   Ubiquinone and other terpenoid-quinone biosynthesis  1 46 -
 osa61   Fatty acid biosynthesis  1 47 -

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osa:LOC4336824 (31 kDa ribonucleoprotein, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4336824
osa-r.5
for
4336824
osa-m.8
for
4336824
ath-u.4
for
AT2G35410
gma-u.4
for
100793319
gma-u.4
for
100792275
sly-u.4
for
101245785
ppo-u.4
for
18094157
mtr-u.4
for
11430294
1 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 6.1 6.0
 6.3
 4.1
 3.5
 5.2
 4.3
3.2
 3.8
2.9
 6.3
2 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 6.0 4.6
 7.4
 4.7
 4.2
3.6
 4.9
4.2
 4.3
 3.5
 4.3
3 ASL2 Albino Seedling Lethal2 4328932 Os02g0259600 5.8 4.0
 7.6
 6.1
 4.2
3.9
 5.0
4.2
 5.1
 3.7
3.3
 4.4
4 LOC4334555 50S ribosomal protein L17, chloroplastic 4334555 Os03g0815400 5.5 4.5
 6.4
 5.7
 2.5
2.2
 5.1
3.5
 5.1
4.0
 3.5
3.4
 4.8
5 LOC4345443 peptidyl-prolyl cis-trans isomerase, chloroplastic 4345443 Os08g0382400 5.5 4.7
 6.2
 6.5
 2.5
2.2
 4.6
4.3
 0.9
 3.4
 5.3
6 LOC4334537 magnesium-chelatase subunit ChlD, chloroplastic-like 4334537 OSNPB_030811100 5.4 4.4
 6.4
 6.5
 2.1
1.4
 3.0
2.2
 3.8
 2.9
 4.6
7 LOC9269534 ribosome-binding ATPase YchF 9269534 Os03g0781000 5.3 5.0
 5.6
 3.6
 2.1
 1.0
 4.4
 3.3
 2.2
8 LOC4345097 preprotein translocase subunit SECY, chloroplastic-like 4345097 OSNPB_080254500 5.3 4.6
 6.0
 5.7
 2.5
 4.0
 4.4
 1.4
1.3
 3.6
9 LOC4342438 RNA-binding protein CP33, chloroplastic 4342438 Os07g0158300 5.3 5.2
 5.4
 7.5
 5.3
3.7
 3.8
3.5
 4.0
 2.7
2.2
 4.3
3.7
10 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 5.3 4.5
 6.1
 6.7
 2.6
 3.1
 2.9
 3.2
 5.5
11 LOC4330763 50S ribosomal protein L29, chloroplastic 4330763 Os02g0754300 5.3 4.1
 6.4
 2.9
 3.6
3.2
 4.5
3.7
 5.1
3.1
 3.8
-0.3
 4.4
12 LOC4338460 uncharacterized LOC4338460 4338460 Os05g0337400 5.3 4.1
 6.5
 6.3
 4.0
3.8
 5.6
4.2
 6.1
 2.7
 4.3
13 LOC4347821 cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial-like 4347821 Os09g0556500 5.2 5.2
 5.3
 4.7
 3.6
3.1
 3.0
1.5
 2.5
 1.7
 1.3
14 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 5.1 5.8
 4.4
 2.3
 3.9
0.0
 2.4
1.0
 3.3
 1.4
 0.9
15 LOC4340846 trigger factor-like protein TIG, Chloroplastic 4340846 Os06g0308000 5.1 4.7
 5.5
 4.6
 5.8
3.2
 4.9
3.9
 5.5
 1.9
 6.9
16 LOC4326517 uncharacterized LOC4326517 4326517 Os01g0940600 5.1 4.4
 5.8
 2.0
 5.9
 4.2
 4.1
 2.8
 5.4
17 LOC4334651 50S ribosomal protein L18, chloroplastic-like 4334651 OSNPB_030828100 5.0 4.2
 5.8
 4.6
 4.3
 5.2
 3.8
 3.9
3.3
 5.1
18 LOC4335962 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic 4335962 Os04g0445700 5.0 4.8
 5.2
 0.5
 0.9
0.7
 0.1
-0.4
 3.9
1.5
 0.4
0.1
 0.7
0.0
19 LOC4333233 30S ribosomal protein S5, chloroplastic 4333233 Os03g0452300 5.0 4.2
 5.8
 5.2
 5.2
4.4
 4.7
3.8
 5.7
 4.3
 5.1
20 LOC4351767 uncharacterized protein ycf45 4351767 Os12g0209000 5.0 4.6
 5.4
 5.1
 1.6
 2.3
 0.7
2.5
21 LOC4329197 fruit protein pKIWI502 4329197 Os02g0328300 4.9 5.1
 4.8
 4.2
 3.3
-0.3
 2.3
-0.4
 4.9
 3.5
-0.3
 2.2
22 LOC4341869 50S ribosomal protein L24, chloroplastic 4341869 Os06g0683200 4.9 3.8
 6.0
 5.7
 3.8
3.2
 3.5
2.9
 4.3
 3.9
 6.7
23 LOC4338877 DAR GTPase 3, chloroplastic 4338877 Os05g0430400 4.9 4.1
 5.6
 3.9
 2.0
-0.7
 3.0
-0.0
 2.9
 3.3
 2.5
24 LOC4325987 uncharacterized lipoprotein syc1174_c 4325987 Os01g0127400 4.9 5.4
 4.3
2.9
 1.7
 4.0
 0.1
 0.9
25 LOC4330652 pentatricopeptide repeat-containing protein At2g13600 4330652 Os02g0735800 4.8 5.6
 4.1





26 LOC4331189 50S ribosomal protein L9, chloroplastic 4331189 Os02g0822600 4.8 3.4
 6.2
 6.0
 3.7
2.7
 4.6
3.8
 3.6
 2.1
 5.9
27 LOC4349290 carotene epsilon-monooxygenase, chloroplastic 4349290 Os10g0546600 4.8 3.9
 5.7
 6.4
 4.1
1.2
 3.3
0.8
 4.1
 1.7
 2.7
28 LOC4346136 glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 4346136 OSNPB_080532200 4.8 5.2
 4.4
 4.9
4.2
 4.2
3.3
 4.0
3.2
 2.6
 2.8
 4.2
29 LOC4343626 peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic 4343626 Os07g0565600 4.8 2.8
 6.8
 3.9
 2.2
1.1
 2.7
1.4
 3.1
 1.6
 1.5
30 LOC4324152 GTP-binding protein At2g22870 4324152 Os01g0732200 4.8 3.5
 6.0
 5.0
 3.4
2.5
 3.3
2.0
 4.9
 1.0
0.5
 2.9
31 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 4.8 3.4
 6.1
 4.9
 5.1
3.7
 5.3
3.4
 4.4
 2.6
 6.8
32 LOC4330995 translation initiation factor IF3-4, chloroplastic 4330995 Os02g0794400 4.7 6.2
 3.2
 5.4
2.4
 5.0
4.0
 3.0
2.1
 3.0
 3.0
 7.1
33 LOC4352441 uncharacterized LOC4352441 4352441 Os12g0541500 4.7 5.3
 4.0
 5.8
 2.3
2.0
 3.2
3.0
 3.7
 4.4
 4.2
34 LOC4326021 protein LOW PSII ACCUMULATION 1, chloroplastic 4326021 Os01g0358300 4.7 3.6
 5.7
 4.0
 4.1
2.3
 5.5
2.5
 3.5
 2.0
 4.9
35 LOC4350829 CDK5RAP1-like protein 4350829 OSNPB_110592800 4.6 5.7
 3.6
 4.9
 1.9
1.6
 2.9
1.9
 3.1
 1.7
 1.4
36 LOC4338005 30S ribosomal protein S31, chloroplastic 4338005 Os05g0186000 4.6 3.8
 5.4
 4.6
 4.0
3.8
 4.2
3.9
 2.9
 2.8
 6.5
37 LOC4332089 50S ribosomal protein L15, chloroplastic 4332089 Os03g0219900 4.6 3.9
 5.3
 7.2
 3.8
 5.2
 5.7
 4.0
0.9
 5.7
38 LOC4325465 thylakoid lumenal 15 kDa protein 1, chloroplastic 4325465 Os01g0144100 4.6 5.4
 3.8
 3.8
 3.2
2.3
 5.2
2.6
 2.6
 3.0
2.3
 3.6
39 LOC4331439 nascent polypeptide-associated complex subunit alpha-like protein 1 4331439 Os03g0121700 4.5 3.4
 5.6
 3.0
0.8
 1.5
1.0
 0.8
0.7
 1.5
1.0
 2.1
2.0
 1.5
1.2
40 LOC4346605 30S ribosomal protein 2, chloroplastic 4346605 Os09g0279500 4.5 4.2
 4.7
 8.0
 5.1
4.5
 5.5
4.4
3.1
 4.9
41 LOC4342001 thylakoid lumenal 16.5 kDa protein, chloroplastic 4342001 Os06g0705100 4.5 3.3
 5.6
 6.3
 1.3
0.9
 3.2
1.8
 2.1
 1.0
0.9
 2.5
42 LOC4337588 uncharacterized protein At5g02240 4337588 Os05g0110300 4.5 4.2
 4.7
 5.2
1.5
 1.3
0.2
 1.0
-1.3
 3.9
 1.3
 2.2
1.6
43 LOC4342342 peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic 4342342 Os07g0133700 4.4 3.2
 5.6
 2.9
 0.7
 1.1
 3.6
 2.2
 2.8
44 LOC9269424 uncharacterized LOC9269424 9269424 Os08g0345400 4.4 3.5
 5.3
 4.4
 4.2
2.9
 2.6
1.9
 3.8
 1.8
 3.1
45 LOC4327541 50S ribosomal protein L34, chloroplastic 4327541 Os01g0805000 4.4 3.2
 5.6
 3.6
 3.3
2.8
 5.0
4.4
 2.8
 2.6
 7.0
46 LOC4339890 pentatricopeptide repeat-containing protein At5g27270 4339890 Os06g0111300 4.4 4.7
 4.0
 1.3
 1.4
 0.3
 0.5
 0.3
0.2
 1.1
47 LOC4332771 uroporphyrinogen decarboxylase 2, chloroplastic-like 4332771 OSNPB_030337600 4.4 4.2
 4.5
 4.7
 2.3
1.9
 2.7
2.6
 4.1
 1.7
0.6
 4.6
48 LOC4347400 uncharacterized LOC4347400 4347400 Os09g0481800 4.4 4.4
 4.3
 3.3
 3.6
2.6
 2.9
2.0
 0.5
 1.1
 2.4
49 LOC4331897 2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic 4331897 Os03g0190100 4.4 5.2
 3.5
 5.0
 0.8
0.1
 4.3
1.7
 3.2
 1.1
 2.5
50 LOC4328432 porphobilinogen deaminase, chloroplastic-like 4328432 OSNPB_020168800 4.3 4.3
 4.4
 4.4
 3.5
2.7
 4.5
3.2
 3.0
 2.7
1.2
 4.7
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