Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   9270258   protease Do-like 2, chloroplastic 
 osa-r.5   9270258   protease Do-like 2, chloroplastic 
 osa-m.8   9270258   protease Do-like 2, chloroplastic 
 ath-u.4   DEG2   DEGP protease 2 
 gma-u.4   100799166   protease Do-like 2, chloroplastic 
 gma-u.4   100796340   protease Do-like 2, chloroplastic 
 sly-u.4   101258381   protease Do-like 2, chloroplastic 
 sly-u.4   101261957   protease Do-like 2, chloroplastic 
 ppo-u.4   18111288   protease Do-like 2, chloroplastic 
 ppo-u.4   7457968   protease Do-like 2, chloroplastic 
 mtr-u.4   25484786   protease Do-like 2, chloroplastic 

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Top 50 coexpressed genes to 9270258 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa970   Aminoacyl-tRNA biosynthesis  3 70 3.36
 osa860   Porphyrin metabolism  1 42 -
 osa3018   RNA degradation  2 112 -
 osa1240   Biosynthesis of cofactors  1 248 -
 osa3010   Ribosome  2 353 -

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osa:LOC9270258 (protease Do-like 2, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
9270258
osa-r.5
for
9270258
osa-m.8
for
9270258
ath-u.4
for
DEG2
gma-u.4
for
100799166
gma-u.4
for
100796340
sly-u.4
for
101258381
sly-u.4
for
101261957
ppo-u.4
for
18111288
ppo-u.4
for
7457968
mtr-u.4
for
25484786
1 LOC4327742 uncharacterized RNA methyltransferase pc1998 4327742 Os01g0920300 8.4 8.2
 8.6
 3.6
 5.4
 5.0
 3.7
 4.7
 2.1
 2.3
 3.3
2 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 8.1 7.8
 8.4
 3.8
 7.2
6.7
 10.3
8.8
 3.4
 4.4
 1.5
1.1
 3.0
1.9
 5.0
3 LOC4344001 29 kDa ribonucleoprotein A, chloroplastic 4344001 Os07g0631900 8.0 7.4
 8.6
 3.4
3.4
 3.9
3.5
 5.5
5.3
 2.9
2.6
 4.1
4.0
 0.9
0.9
 5.1
2.3
 3.4
4 wsl6 white stripe leaf6 9271571 OSNPB_050567300 7.5 7.0
 8.1
 3.8
 5.2
-0.2
 6.3
0.7
 2.3
 5.8
 2.2
 5.3
 2.5
5 LOC4339632 uncharacterized LOC4339632 4339632 Os05g0566300 7.5 8.7
 6.3
 3.3
 7.0
2.8
 7.2
4.1
 1.3
 2.7
 2.1
 2.3
 3.4
6 LOC4334632 transcription termination/antitermination protein NusG 4334632 Os03g0825500 7.4 7.2
 7.6
 4.1
 3.3
 4.0
 3.0
 5.7
 0.5
 1.4
 2.3
7 LOC4344632 multiple organellar RNA editing factor 9, chloroplastic 4344632 Os08g0139100 7.3 6.9
 7.8
 1.7
-0.8
 5.0
4.9
 5.0
4.9
 2.3
 2.9
 1.1
1.0
 4.1
2.5
 2.1
0.0
8 LOC4325462 uncharacterized protein At2g39795, mitochondrial 4325462 Os01g0143800 7.2 5.5
 8.8







9 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 7.2 8.4
 5.9
 6.7
 4.1
 6.5
 3.1
 6.7
 1.5
 3.2
 3.2
10 LOC4332957 RNA-binding protein CP29B, chloroplastic 4332957 Os03g0376600 7.1 6.5
 7.6
 3.4
3.4
 3.9
3.5
 5.5
5.3
 2.9
2.6
 4.1
4.0
 0.9
0.9
 5.1
2.3
 3.4
11 LOC4344860 pentatricopeptide repeat-containing protein At3g59040 4344860 Os08g0191900 6.9 6.0
 7.7
 2.1
 3.6
3.2
 4.4
4.1
 2.8
 4.3
 2.3
 5.1
 2.0
12 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 6.7 6.3
 7.2
 2.9
0.2
 3.7
3.0
 5.9
4.8
 2.7
0.8
 3.3
1.9
 0.9
0.5
 3.6
2.0
 2.1
1.5
13 LOC4334387 probable zinc metalloprotease EGY1, chloroplastic 4334387 OSNPB_030792400 6.4 5.7
 7.2
 2.9
 4.4
4.4
 4.7
4.7
 2.4
 2.3
 2.6
 2.3
 2.3
14 LOC4328994 proteinaceous RNase P 1, chloroplastic/mitochondrial 4328994 Os02g0273800 6.4 4.9
 7.9
2.5
 3.7
 4.8
 3.1
 0.4
 1.4
 4.1
15 LOC4328072 uncharacterized LOC4328072 4328072 Os02g0115600 6.4 5.9
 6.9
 7.9
 5.6
 5.2
 3.8
 4.6
 3.3
 6.1
 2.3
16 LOC4340049 probable ribosome-binding factor A, chloroplastic 4340049 Os06g0137600 6.2 6.0
 6.5
 2.9
 3.6
 4.6
 2.9
 3.2
 0.8
 2.1
 2.4
17 LOC4341869 50S ribosomal protein L24, chloroplastic 4341869 Os06g0683200 6.2 5.7
 6.8
 7.1
 3.7
3.1
 5.7
5.6
 2.7
 4.4
 1.8
 3.4
 4.0
18 LOC4333618 transcription antitermination protein NusB 4333618 Os03g0656900 6.2 7.9
 4.5
 3.0
 4.8
4.3
 7.0
5.4
 1.9
 6.5
 2.8
 6.4
 4.1
19 LOC4334030 putative rRNA methyltransferase YlbH 4334030 Os03g0736400 6.2 5.4
 7.0
 4.5
 4.8
 5.2
 2.7
 3.9
 2.3
 3.7
 3.6
20 LOC4326614 DEAD-box ATP-dependent RNA helicase 25-like 4326614 OSNPB_010618400 6.1 4.9
 7.3
 1.4
0.6
 3.7
1.8
 4.2
3.0
 0.5
 1.9
 1.0
0.9
 3.6
3.2
 2.0
0.9
21 LOC4340846 trigger factor-like protein TIG, Chloroplastic 4340846 Os06g0308000 6.1 5.3
 6.9
 5.7
 5.3
4.3
 5.9
5.2
 3.2
 5.7
 1.5
 6.9
 4.1
22 LOC4324908 rhodanese-like domain-containing protein 4A, chloroplastic 4324908 Os01g0889800 6.1 5.5
 6.6
 2.4
 5.6
5.5
 6.3
6.2
 2.0
 2.6
 1.1
 4.9
 2.4
23 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 6.0 6.8
 5.3
 7.4
 4.4
 6.9
 3.0
3.0
 5.4
4.7
 1.5
1.3
 4.5
3.1
 2.5
24 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 6.0 5.8
 6.2
 3.4
 4.7
-0.1
 5.4
0.8
 3.0
 5.8
 2.0
 4.2
 3.0
25 LOC4336948 methionine aminopeptidase 1B, chloroplastic 4336948 Os04g0610500 6.0 6.9
 5.1
 3.5
 5.2
4.9
 6.9
6.4
 3.1
 3.9
 1.8
 3.5
 3.4
26 LOC4328118 glutamate--tRNA ligase, chloroplastic/mitochondrial 4328118 Os02g0121000 6.0 5.5
 6.5
 2.6
 7.6
4.2
 7.6
3.6
 3.0
 3.9
 0.4
 2.6
 0.9
27 LOC4330025 lysine--tRNA ligase, chloroplastic/mitochondrial 4330025 Os02g0623500 6.0 5.0
 7.0
 4.8
 6.0
 8.8
 4.3
 5.5
 2.5
 3.2
 1.2
28 LOC4339922 superoxide dismutase [Fe] 1, chloroplastic-like 4339922 OSNPB_060115400 6.0 5.4
 6.5
 3.3
0.6
 6.1
4.0
 6.3
4.9
 2.4
0.8
 2.3
2.2
 0.8
0.7
 3.2
1.3
 0.6
29 LOC4335917 uncharacterized LOC4335917 4335917 Os04g0438300 6.0 4.2
 7.7
 1.6
 4.7
3.0
 3.5
2.4

0.4
 -0.1
 1.6
30 LOC4328965 chloroplast processing peptidase 4328965 Os02g0267000 5.9 5.4
 6.3
 2.2
 4.6
3.2
 5.8
3.0
 1.5
 4.4
 1.6
1.6
 3.4
1.8
 2.1
31 LOC4327567 Ribonuclease III domain-containing protein RNC1, chloroplastic 4327567 OSNPB_010810100 5.9 6.4
 5.3
 3.3
 5.0
4.3
 6.6
5.2
 2.1
 2.6
 0.0
 2.0
 3.1
32 LOC4343647 uncharacterized LOC4343647 4343647 Os07g0568900 5.8 4.1
 7.6







33 LOC4333096 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic 4333096 Os03g0411500 5.8 4.9
 6.7
 5.7
 3.5
2.7
 6.0
3.1
 2.2
 5.4
 1.4
0.9
 4.9
2.2
 1.7
34 LOC4350988 GTPase Der 4350988 Os11g0638000 5.7 6.1
 5.4
 4.4
 5.4
 7.6
 1.6
 3.3
 0.1
 2.6
 2.3
35 LOC4324505 aspartate--tRNA ligase, chloroplastic/mitochondrial 4324505 Os01g0153400 5.7 5.7
 5.7
 4.5
 5.2
5.1
 6.7
5.9
 3.4
 3.8
 2.5
2.2
 6.0
3.2
 2.0
1.7
36 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 5.7 4.2
 7.2
 3.4
-0.3
 3.2
 5.4
 2.5
1.0
 3.1
3.0
 0.9
-0.0
 3.3
3.0
 3.0
37 LOC4329119 uncharacterized LOC4329119 4329119 Os02g0307800 5.7 6.5
 4.8
 3.2
 4.0
3.1
 4.5
4.1
 3.7
 4.4
 1.5
 1.7
 1.7
0.9
38 LOC4330652 pentatricopeptide repeat-containing protein At2g13600 4330652 Os02g0735800 5.7 5.2
 6.2







39 LOC4346605 30S ribosomal protein 2, chloroplastic 4346605 Os09g0279500 5.6 5.3
 6.0
 6.9
 7.5
3.9
 8.4
5.0

2.3
 4.0
 2.7
40 LOC4349098 uncharacterized LOC4349098 4349098 Os10g0512500 5.6 5.9
 5.2
 6.1
 4.8
 3.9
 2.9
 5.0
 0.0
 2.1
 1.3
41 LOC4324026 protein FLUORESCENT IN BLUE LIGHT, chloroplastic 4324026 Os01g0510600 5.6 5.1
 6.0
 6.7
 4.4
2.7
 3.5
3.5
 2.4
2.3
 3.8
2.0
 1.5
 1.6
 3.1
42 LOC9269203 tRNase Z TRZ2, chloroplastic 9269203 Os09g0482680 5.6 6.6
 4.5
 1.8
-1.3
 3.0
2.7
 3.9
2.3
 2.8
0.6
 4.0
-0.4
 2.6
1.3
 4.6
0.5
 3.5
0.6
43 LOC4342497 probable polyribonucleotide nucleotidyltransferase 1, chloroplastic 4342497 OSNPB_070168000 5.5 5.3
 5.8
 4.9
 6.5
 7.1
 2.7
 3.7
 4.3
3.9
 8.7
5.6
 2.7
44 LOC4325987 uncharacterized lipoprotein syc1174_c 4325987 Os01g0127400 5.5 4.2
 6.8
2.6
 3.3
 4.1
 6.3
 2.3
 4.0
 1.1
45 LOC4345863 RNA-binding protein CP33, chloroplastic 4345863 Os08g0483200 5.5 5.8
 5.3
 5.0
 4.9
3.5
 8.3
5.7
 3.8
 6.6
 0.2
 2.8
 3.7
46 LOC4343267 peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic 4343267 Os07g0490400 5.5 4.3
 6.7
 4.6
 6.6
5.0
 8.0
5.0
 2.0
 4.9
 2.4
 1.6
 3.0
47 LOC4324255 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 4324255 Os01g0705300 5.5 7.2
 3.8
 3.5
 4.2
4.2
 4.0
3.8
 2.5
 3.3
 1.6
 2.6
 2.0
48 LOC4341108 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic 4341108 Os06g0498900 5.5 4.6
 6.3
 1.4
 2.4
 3.9
 1.8
 2.1
 1.9
 2.4
 2.4
49 LOC4346294 28 kDa ribonucleoprotein, chloroplastic 4346294 Os08g0557100 5.5 5.9
 5.0
 6.5
3.6
 5.7
5.3
 8.1
6.9
 3.1
 5.9
 1.1
0.8
 3.8
3.6
 3.6
1.6
50 LOC4334251 cytochrome c biogenesis protein CCS1, chloroplastic-like 4334251 OSNPB_030769600 5.4 5.6
 5.3
 0.9
 3.4
 4.1
 1.2
 3.0
 0.0
 0.7
 3.3
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