Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4337804   pentatricopeptide repeat-containing protein At3g05340 
 osa-r.5   4337804   pentatricopeptide repeat-containing protein At3g05340 
 osa-m.8   4337804   pentatricopeptide repeat-containing protein At3g05340 
 ath-u.4   AT3G05340   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.4   102660265   pentatricopeptide repeat-containing protein At3g05340 
 sly-u.4   101264978   pentatricopeptide repeat-containing protein At3g05340 
 ppo-u.4   7481754   pentatricopeptide repeat-containing protein At3g05340 
 mtr-u.4   11423164   pentatricopeptide repeat-containing protein At3g05340 

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Top 50 coexpressed genes to 4337804 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa240   Pyrimidine metabolism  1 63 -
 osa51   Fructose and mannose metabolism  1 64 -
 osa1232   Nucleotide metabolism  1 80 -
 osa230   Purine metabolism  1 91 -
 osa480   Glutathione metabolism  1 114 -

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osa:LOC4337804 (pentatricopeptide repeat-containing protein At3g05340) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4337804
osa-r.5
for
4337804
osa-m.8
for
4337804
ath-u.4
for
AT3G05340
gma-u.4
for
102660265
sly-u.4
for
101264978
ppo-u.4
for
7481754
mtr-u.4
for
11423164
1 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 4.5 2.4
 6.5




2 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 4.4 3.2
 5.6
3.9
 4.3
0.6
3 LOC4332013 putative pentatricopeptide repeat-containing protein At1g02420 4332013 Os03g0208600 4.4 4.3
 4.4
5.7
 0.9
 1.0
 1.7
4 LOC4327605 putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial 4327605 Os01g0819800 4.3 3.1
 5.6
 6.0
 4.2
 4.0
0.8
5 LOC4344190 putative pentatricopeptide repeat-containing protein At5g40405 4344190 Os07g0662700 4.2 3.1
 5.3




6 LOC4339616 E3 SUMO-protein ligase MMS21 4339616 Os05g0563500 3.9 3.7
 4.1
 2.6
0.6
 -1.2
 1.2
7 LOC4347812 pentatricopeptide repeat-containing protein At2g22410, mitochondrial 4347812 Os09g0555400 3.8 3.5
 4.1



0.2
8 LOC4340491 pentatricopeptide repeat-containing protein At3g29230 4340491 Os06g0216400 3.8 3.4
 4.1




9 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 3.7 3.2
 4.2




10 LOC4348020 MEIOTIC F-BOX protein MOF-like 4348020 Os10g0126700 3.7 2.4
 5.0




11 LOC4339672 pentatricopeptide repeat-containing protein At5g39680 4339672 Os05g0572900 3.6 2.4
 4.9
 5.5
 5.8
 1.6
0.5
12 LOC4334566 pentatricopeptide repeat-containing protein At2g41080 4334566 Os03g0816600 3.6 3.2
 4.0
 4.7
 7.0
 4.6
 1.8
 1.6
13 LOC4335906 protein disulfide isomerase-like 1-2 4335906 OSNPB_040436300 3.4 3.3
 3.6
 -1.3
-1.4
 1.0
1.0
 1.6
1.0
 0.8
 -2.4
14 LOC4350793 pentatricopeptide repeat-containing protein At4g14850 4350793 Os11g0583300 3.4 2.2
 4.5
 3.8
 3.9
 6.1
1.2
0.5
15 LOC4349672 non-structural maintenance of chromosomes element 1 homolog 4349672 Os11g0130300 3.3 2.7
 3.9
 1.4
 -0.0
 1.1
 -0.3
 0.5
16 LOC4346770 L-type lectin-domain containing receptor kinase IX.1 4346770 Os09g0334800 3.3 2.5
 4.0




17 LOC4344238 pentatricopeptide repeat-containing protein At4g32430, mitochondrial 4344238 Os07g0670000 3.2 3.2
 3.2
 4.0
3.0
1.7
18 LOC4342822 pentatricopeptide repeat-containing protein At4g18520, chloroplastic 4342822 Os07g0244400 3.2 2.6
 3.7
 3.5
 5.0
 3.6
1.0
19 LOC4338983 pentatricopeptide repeat-containing protein At2g27610 4338983 Os05g0455900 3.1 3.0
 3.2
 4.9
 2.7
 3.9

20 LOC4342804 pentatricopeptide repeat-containing protein At4g21065 4342804 Os07g0239600 3.1 2.2
 4.0
6.3
6.1
 3.6

21 LOC4344459 uncharacterized LOC4344459 4344459 Os08g0107600 3.1 2.8
 3.3




22 LOC4351284 putative pentatricopeptide repeat-containing protein At3g08820 4351284 Os12g0109300 3.1 2.2
 3.9
 3.4
 6.0
 5.5
 0.6
0.5
 1.5
23 LOC4345374 uncharacterized LOC4345374 4345374 Os08g0360000 3.1 3.7
 2.4
 3.2
 2.5
 0.8
 -0.6
 0.1
24 LOC4337840 pentatricopeptide repeat-containing protein At2g13600 4337840 Os05g0153400 3.0 2.7
 3.3




25 LOC4348029 uncharacterized LOC4348029 4348029 Os10g0128800 3.0 2.7
 3.3




26 LOC4339275 single-stranded DNA-binding protein, mitochondrial 4339275 Os05g0509700 2.9 3.4
 2.5
 0.6
 2.3
1.0
 3.5
 0.0
 0.5
27 LOC4330860 pentatricopeptide repeat-containing protein At1g05750, chloroplastic 4330860 Os02g0769900 2.9 2.6
 3.3
 4.5
 5.2
 4.0
 2.0
 0.2
-0.5
28 LOC4346006 putative pentatricopeptide repeat-containing protein At3g05240 4346006 Os08g0511000 2.9 2.0
 3.9



2.0
29 LOC4344519 exosome complex component RRP41-like 4344519 Os08g0116800 2.9 1.9
 3.9
 0.6
 2.3
1.4
 2.0
 -0.8
-0.9
 0.5
30 LOC4328111 methyltransferase-like protein 23 4328111 Os02g0120300 2.9 3.0
 2.8
 1.2
 0.8
 0.1
0.6
31 LOC4344262 pentatricopeptide repeat-containing protein At3g18020 4344262 Os07g0674300 2.9 2.2
 3.5
 5.0
 5.9
 1.8
 0.9
 1.2
32 LOC4342406 pentatricopeptide repeat-containing protein At4g21065 4342406 2.9 3.8
5.1
 5.6
 3.3

33 LOC4348019 putative FBD-associated F-box protein At1g78730 4348019 Os10g0126600 2.9 2.2
 3.5




34 LOC4348018 putative F-box/LRR-repeat protein At5g38386 4348018 Os10g0126500 2.9 3.8





35 LOC4351584 pentatricopeptide repeat-containing protein At4g15720 4351584 Os12g0163600 2.9 1.8
 3.9



1.8
36 LOC4338264 putative pentatricopeptide repeat-containing protein At1g10330 4338264 Os05g0271900 2.8 1.6
 4.1
 3.6
 4.5
 0.1

37 LOC4340258 ribonucleoside-diphosphate reductase large subunit 4340258 Os06g0168600 2.8 2.7
 2.9
 0.5
 1.6
-0.4
 2.1
1.5
 -0.5
-0.6
 0.5
-0.8
38 LOC9272531 pentatricopeptide repeat-containing protein At2g35030, mitochondrial 9272531 Os11g0433101 2.8 3.4
5.0
 5.6
 2.3
1.5
1.2
39 LOC4328019 putative pentatricopeptide repeat-containing protein At1g68930 4328019 Os02g0106300 2.8 3.2
 2.4
 4.9
 5.9
 2.1
 1.5
 1.9
1.0
40 LOC4344787 CRS2-associated factor 1, mitochondrial-like 4344787 OSNPB_080174900 2.8 3.9
2.3
 1.5
 -0.6
 1.5
 0.7
41 LOC4327814 pentatricopeptide repeat-containing protein At3g16610 4327814 Os01g0977400 2.8 1.0
 4.6
2.8
1.5
 0.4
42 LOC4349574 pentatricopeptide repeat-containing protein At3g09040, mitochondrial 4349574 Os11g0109800 2.8 3.6





43 LOC4341594 nuclear intron maturase 4, mitochondrial 4341594 Os06g0634100 2.8 2.3
 3.2
1.0
 1.4
 0.8
 1.8
44 LOC4333040 pentatricopeptide repeat-containing protein At4g33990 4333040 Os03g0396200 2.8 1.5
 4.0
 4.1
 4.4
 1.6
 0.4
 1.9
45 LOC4333574 GTPase LSG1-2 4333574 Os03g0647500 2.8 2.9
 2.6
 0.5
-0.3
 2.8
2.4
 0.6
 -1.5
 0.3
46 LOC4351121 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4351121 Os11g0680200 2.7 2.2
 3.2
 4.0
 5.5
 3.6

47 LOC4342999 transcription termination factor MTEF18, mitochondrial 4342999 Os07g0409400 2.7 1.2
 4.2
 3.9
 2.8
0.6
 -0.4
 -0.2
 1.3
0.9
48 LOC9267687 pentatricopeptide repeat-containing protein At5g43790 9267687 Os12g0128200 2.7 1.7
 3.7
 2.8
3.7
0.9
49 LOC4334929 pentatricopeptide repeat-containing protein At3g29230 4334929 Os04g0110500 2.7 2.1
 3.3




50 LOC4349615 mannan endo-1,4-beta-mannosidase 7-like 4349615 OSNPB_110118200

0.4
 -0.4
-0.5
 -1.5
 -0.1
-0.4
 0.1
-1.0
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