Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4337844   E3 ubiquitin-protein ligase RFI2 
 osa-r.5   4337844   E3 ubiquitin-protein ligase RFI2 
 osa-m.8   4337844   E3 ubiquitin-protein ligase RFI2 
 osa-u.4   4326477   E3 ubiquitin-protein ligase RFI2 
 ath-u.4   AT3G05545   RING/U-box superfamily protein 
 gma-u.4   100815923   E3 ubiquitin-protein ligase RFI2 
 gma-u.4   100807331   E3 ubiquitin-protein ligase RFI2 
 gma-u.4   100798107   E3 ubiquitin-protein ligase RFI2 
 sly-u.4   AdBiL   E3 ubiquitin ligase AdBiL 
 ppo-u.4   18098660   E3 ubiquitin-protein ligase RFI2 
 ppo-u.4   7478939   E3 ubiquitin-protein ligase RFI2 
 mtr-u.4   11407185   E3 ubiquitin-protein ligase RFI2 
 mtr-u.4   11434170   E3 ubiquitin-protein ligase RFI2 

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Top 50 coexpressed genes to 4337844 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3022   Basal transcription factors  1 47 -
 osa562   Inositol phosphate metabolism  1 64 -
 osa4070   Phosphatidylinositol signaling system  1 66 -
 osa4146   Peroxisome  2 92 -
 osa4016   MAPK signaling pathway - plant  1 158 -

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osa:LOC4337844 (E3 ubiquitin-protein ligase RFI2) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4337844
osa-r.5
for
4337844
osa-m.8
for
4337844
osa-u.4
for
4326477
ath-u.4
for
AT3G05545
gma-u.4
for
100815923
gma-u.4
for
100807331
gma-u.4
for
100798107
sly-u.4
for
AdBiL
ppo-u.4
for
18098660
ppo-u.4
for
7478939
mtr-u.4
for
11407185
mtr-u.4
for
11434170
1 LOC4344650 transcription factor MYBS3-like 4344650 Os08g0144000 5.5 5.4
 5.7
 4.7








2 LOC4343911 uncharacterized LOC4343911 4343911 Os07g0616900 4.9 5.3
 4.4
 2.0
1.7
 4.4
 4.7
3.1
 4.1
3.3
 3.5
2.5
 3.9
 2.2
2.1
 2.4
2.0
 3.4
 2.8
3 LOC4348976 G patch domain and ankyrin repeat-containing protein 1 homolog 4348976 Os10g0491900 4.8 5.3
 4.3
 2.6
 2.1
 0.7
 0.3
 0.4
 -0.4
 -0.0
 0.2
 0.5
 0.3
4 LOC4326322 probable E3 ubiquitin-protein ligase ZFP1 4326322 Os01g0667700 4.6 3.1
 6.0
 2.0
-0.2
 2.3
1.2
 3.0
2.8
 4.5
3.8
 4.2
3.3
 2.3
1.3
 4.2
2.4
 2.5
1.7
 4.2
 4.9
5 LOC4326477 E3 ubiquitin-protein ligase RFI2 4326477 Os01g0350900 4.5 4.4
 4.5
 4.5
11.9
7.5
 11.9
8.0
 11.2
8.0
7.1
 7.1
 4.8
 4.8
6 LOC4352041 zinc finger CCCH domain-containing protein 66-like 4352041 OSNPB_120405100 4.4 5.2
 3.7
 4.2
3.2
 0.3
-0.1
 1.3
0.9
 1.7
0.9
 -0.4
-0.4
 2.2
 2.1
0.5
 2.5
1.2
 1.0
 1.5
7 LOC4328520 homeobox protein knotted-1-like 2 4328520 OSNPB_020182800 4.4 5.7
 3.1
 1.4
0.6
 0.1
-0.1
 2.2
1.6
 1.6
1.4
 1.6
1.4
 -0.9
-1.0
 0.8
0.7
 0.4
0.0
 2.2
1.5
 1.7
0.7
8 LOC4328306 probable protein phosphatase 2C 10 4328306 OSNPB_020149800 4.4 4.6
 4.2
 1.5
0.8
 0.8
0.4
 3.1
1.5
 2.6
1.6
 3.8
2.8
 1.9
 1.3
1.0
 2.3
1.4
 3.8
1.0
 3.4
2.4
9 LOC4327410 protein IQ-DOMAIN 1 4327410 Os01g0833800 4.4 4.6
 4.1
 1.9








10 LOC4338345 zinc finger AN1 domain-containing stress-associated protein 15-like 4338345 OSNPB_050299700 4.3 4.7
 3.9
 2.2








11 LOC4328022 transmembrane protein 120 homolog 4328022 Os02g0106800 4.2 4.2
 4.2
 0.7
0.6
 1.6
0.5
 0.6
-1.2
 1.2
-0.9
 0.5
-1.7
 4.9
 1.5
1.3
 2.2
1.8
 0.3
 -0.2
12 LOC4326957 auxin response factor 4-like 4326957 OSNPB_010927600 4.2 4.7
 3.7
 5.1
3.0
 1.3
 3.0
2.8
 2.0
1.3
 2.0
1.7
 2.5
2.1
 1.5
1.4
 1.2
1.1
 2.6
 1.5
13 LOC4340405 polyadenylate-binding protein-interacting protein 7 4340405 Os06g0199200 4.2 5.5
 2.9
 0.9
-0.2
 2.0
 2.0
1.2
 1.2
1.1
 1.8
1.1
 3.3
 3.5
3.5
 1.6
1.3
 1.9
 2.3
14 LOC4337525 peroxisomal membrane protein PEX14 4337525 Os05g0101200 4.1 3.9
 4.3
 2.7
0.8
 2.4
 2.8
-0.2
 1.8
0.9
 3.4
0.4
 3.6
0.1
 0.7
-0.1
 1.3
-0.2
 2.2
 1.8
15 LOC9272272 uncharacterized protein At1g51745 9272272 Os04g0599100 4.1 3.9
 4.3
 3.1
2.5
 2.5
 4.4
3.6
 4.2
2.6
 1.9
1.6
 2.3
-0.0
 0.0
-0.8
 0.4
0.3
 2.3
0.3
 1.7
1.6
16 LOC4327678 vesicle transport v-SNARE 13 4327678 Os01g0707300 4.1 5.0
 3.2
 2.1
 2.6
1.6
 4.5
3.7
 4.0
2.4
 2.3
1.4
 1.6
0.7
 1.0
0.6
 1.7
1.6
 2.6
1.0
 3.5
1.3
17 LOC9272591 probable E3 ubiquitin-protein ligase HIP1 9272591 OSNPB_040648800 4.1 3.4
 4.8
 1.3
 4.7
4.2
 3.2
3.1
 3.9
3.1
 3.7
3.1
 5.3
3.8
 2.9
1.3
 2.0
0.4
 3.7
3.6
 5.6
3.4
18 LOC4351311 probable serine/threonine-protein kinase WNK8 4351311 OSNPB_120114100 4.1 2.5
 5.7
 3.2
2.5
 1.9
-0.0
 1.1
1.0
 1.0
1.0
 0.6
0.4
 0.7
-0.2
 0.3
0.2
 -0.1
-0.2
 0.2
0.0
 1.0
-0.2
19 LOC4336318 protein NUCLEAR FUSION DEFECTIVE 4 4336318 Os04g0502800 4.1 4.7
 3.5
 2.5
-0.1
 0.2
 0.0
-0.1
 -0.2
-0.2
 -0.8
-0.9
 0.8
-1.0
 0.1
-0.1
 0.1
-0.3
 1.1
1.0
 0.3
-0.1
20 LOC4333726 BEL1-like homeodomain protein 7 4333726 Os03g0680800 4.1 5.3
 2.8
 2.5
1.9
 0.4
0.2
 2.6
1.6
 2.6
2.2
 1.4
1.2
 1.6
0.4
 2.4
1.8
 1.7
1.5
 2.7
-0.7
 1.5
1.3
21 LOC4342419 peroxisomal membrane protein 13 4342419 Os07g0152800 4.0 5.2
 2.9
 1.1
 2.9
 1.0
0.4
 0.6
0.3
 0.6
0.5
 4.3
 2.3
2.1
 4.2
3.1
 3.0
 4.1
22 LOC4337578 uncharacterized LOC4337578 4337578 Os05g0108100 4.0 4.1
 3.8
 3.6
1.3
 0.6
0.6
 2.0
1.0
 2.2
1.4
 0.9
0.8
 0.2
0.0
 2.6
2.4
 3.1
2.9
 0.8
0.2
 1.2
0.8
23 LOC4325133 altered inheritance of mitochondria protein 3 4325133 Os01g0754500 4.0 4.1
 3.8
 1.2
 3.2
 3.3
2.9
 5.0
5.0
 4.2
3.4
 4.4
3.4
 3.2
3.1
 2.4
1.7
 5.6
2.7
 3.0
1.7
24 LOC4349492 inositol-tetrakisphosphate 1-kinase 5-like 4349492 OSNPB_100576100 4.0 4.6
 3.3
 3.0
 2.2
 1.4
0.5
 2.2
-0.1
 1.6
0.1
 1.2
-0.5
 1.1
-0.3
 0.7
-0.0
 1.8
 3.0
25 LOC4331196 uncharacterized LOC4331196 4331196 Os02g0823300 3.9 3.9
 4.0
 3.2
0.6
 2.6
1.7
 2.2
2.1
 2.3
2.1
 1.2
0.7
 2.2
2.1
 2.2
2.0
 1.9
1.9
 2.3
2.3
 2.6
1.6
26 LOC4327265 uncharacterized LOC4327265 4327265 Os01g0316900 3.9 4.8
 3.0
 2.4








27 LOC4349389 putative dual specificity protein phosphatase DSP8 4349389 Os10g0561900 3.9 4.7
 3.1
 3.2
0.8
 2.1
-1.7
 2.6
2.3
 3.1
2.9
 4.2
3.8
 3.0
2.5
 2.4
2.0
 2.7
2.3
 4.0
2.9
 2.4
1.0
28 LOC4344365 uncharacterized LOC4344365 4344365 Os07g0690300 3.9 2.6
 5.1
 2.2
0.7
 2.7
 0.4
0.3
 2.3
1.8
 1.9
1.2
 2.5
 3.0
2.6
 1.7
1.3
 4.6
 1.2
29 LOC4345154 probable WRKY transcription factor 32 4345154 Os08g0276200 3.8 3.9
 3.8
 4.1








30 LOC4328487 calmodulin-binding protein 60 C 4328487 Os02g0177800 3.8 3.7
 3.9
 2.3
1.9
 2.9
0.1
 3.1
2.7
 2.0
2.0
 2.8
0.9
 4.4
0.2
 2.9
2.3
 1.3
0.6
 2.9
1.1
 1.7
0.7
31 LOC4346724 E3 ubiquitin-protein ligase At1g63170 4346724 Os09g0323100 3.8 4.1
 3.5
 1.6








32 LOC4332880 uncharacterized LOC4332880 4332880 Os03g0359000 3.8 3.9
 3.7
 1.2
 4.8
-0.9
 2.8
2.4
 2.2
1.9
 1.9
1.0
 1.7
 2.2
1.5
 1.8
1.2
 2.4
1.0
 4.7
0.2
33 LOC4325497 protein CROWDED NUCLEI 4 4325497 Os01g0767000 3.8 3.3
 4.3
 0.7
0.3
-0.3
 -0.5
-0.7
 0.2
-0.1
 -0.1
 -0.8
 -1.1
 1.4
 0.2
34 LOC4333817 F-box protein At1g55000 4333817 Os03g0699600 3.8 3.2
 4.3
 2.6
 0.2
 2.1
1.9
 2.9
2.2
 2.4
2.0
 4.3
 -0.0
 0.4
 3.2
 0.5
35 LOC4348554 uncharacterized LOC4348554 4348554 Os10g0397200 3.7 4.7
 2.7
 3.6
 3.7
 2.1
1.7
 2.3
1.8
 2.5
1.0
 1.3
 1.1
 1.8
 1.3
-1.2
 0.4
-0.2
36 LOC4325319 uncharacterized LOC4325319 4325319 Os01g0612600 3.7 3.8
 3.6
 1.5
 0.6
 1.8
0.6
 1.3
1.1
 0.9
0.2
 4.8
3.8
 2.8
1.8
 2.0
1.2
 2.9
 2.6
37 LOC4350492 zinc finger CCCH domain-containing protein 63-like 4350492 OSNPB_110472000 3.7 3.9
 3.6
 4.2
3.2
 0.3
-0.1
 1.3
0.9
 1.7
0.9
 -0.4
-0.4
 2.2
 2.1
0.5
 2.5
1.2
 1.0
 1.5
38 LOC4334307 actin-depolymerizing factor 2-like 4334307 OSNPB_030780400 3.7 3.3
 4.2
 3.8
-0.2
 1.9
 0.8
0.6
 0.6
0.5
 0.9
0.8
 2.1
1.0
 0.5
-1.1
 0.9
-1.1
 0.2
0.1
 2.0
-0.9
39 LOC4328514 ubiquitin fusion degradation protein 1 homolog 4328514 Os02g0181800 3.7 5.1
 2.4
 2.9
0.6
 3.9
3.7
 2.8
2.4
 1.8
1.7
 1.3
1.1
 2.4
 1.9
1.0
 2.4
0.7
 3.5
 2.9
40 LOC4347050 uncharacterized LOC4347050 4347050 Os09g0413600 3.7 4.0
 3.4
 1.9
 -0.1
-0.4
 1.9
1.4
 1.7
0.8
 0.6
0.1
 -0.2
-0.5
 0.1
-0.1
 0.2
0.1
 0.5
-0.7
 -0.2
-0.8
41 LOC4333421 uncharacterized LOC4333421 4333421 Os03g0607500 3.7 3.3
 4.1
 2.9
0.7
 -0.4
 1.1
0.5
 1.0
-0.2
 0.4
-1.8
 1.9
 -0.1
-0.3
 -0.0
-0.6
 1.8
 -0.2
42 LOC4340850 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 4340850 Os06g0308800 3.7 3.4
 4.0
 2.1
 3.8
 4.2
3.9
 4.7
4.5
 3.6
2.7
 3.5
 1.0
 1.2
 6.3
 2.5
43 LOC9271519 ethylene-responsive transcription factor-like protein At4g13040 9271519 Os02g0499000 3.7 3.1
 4.3
 2.6
 0.5
 0.5
0.4
 -0.1
-0.6
 0.6
0.6
 0.3
 1.7
 1.5
 0.4
-0.4
 -0.4
-0.5
44 LOC4347831 probable protein phosphatase 2C 70 4347831 OSNPB_090558000 3.7 4.0
 3.3
 2.8
0.3
 1.6
0.8
 2.2
0.7
 1.5
0.4
 1.3
1.2
 1.6
-0.3
 3.8
2.6
 3.5
1.8
 1.4
1.4
 2.6
0.7
45 LOC4336212 F-box protein SKIP14 4336212 Os04g0485800 3.7 4.2
 3.2
 0.9
0.6
 1.4
 3.0
2.4
 3.3
2.9
 2.5
2.2
 3.1
1.3
 2.6
-0.1
 1.7
-0.8
 4.2
 2.3
46 LOC4349849 transcription factor VIP1 4349849 Os11g0160500 3.6 4.5
 2.8
 2.1
1.5
 1.1
 2.1
0.6
 1.9
0.3
 0.9
-0.5
 2.3
-0.3
 1.5
 2.3
 3.0
 0.9
47 LOC4328528 uncharacterized LOC4328528 4328528 Os02g0184500 3.6 4.4
 2.9
 2.6
2.2
 5.3
2.9
 3.9
3.7
 4.3
3.8
 2.5
2.0
 2.5
2.2
 2.7
-0.0
 3.2
0.5
 7.1
1.2
 1.9
1.4
48 LOC4340087 protein HEADING DATE 3B-like 4340087 Os06g0142600 3.6 2.3
 5.0
 2.7
0.9
 1.0
 0.6
-0.0
 1.6
0.7
 2.4
2.3
 3.4
2.2
 2.9
-0.0
 1.9
-0.4
 2.6
0.9
 2.8
-0.3
49 LOC4329537 neutral/alkaline invertase 3, chloroplastic-like 4329537 OSNPB_020529400 3.6 2.7
 4.5
 1.9
1.9
 0.4
 2.0
0.9
 2.1
0.3
 3.8
0.3
 1.4
0.2
 0.4
0.1
 0.6
0.4
 -0.7
 1.1
50 LOC4329333 stAR-related lipid transfer protein 7, mitochondrial 4329333 Os02g0468400 3.6 4.0
 3.2









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