Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4338280   uncharacterized LOC4338280 
 osa-r.5   4338280   uncharacterized LOC4338280 
 osa-m.8   4338280   uncharacterized LOC4338280 
 osa-u.4   9267386   translation initiation factor IF-2 
 osa-u.4   112938696   atherin-like 
 ath-u.4   AT3G17460   PHD finger family protein 
 ath-u.4   AT1G09520   uncharacterized protein 
 gma-u.4   102664958   uncharacterized LOC102664958 
 gma-u.4   102660270   uncharacterized LOC102660270 
 gma-u.4   100778789   uncharacterized LOC100778789 
 sly-u.4   101263762   uncharacterized LOC101263762 
 ppo-u.4   7481648   uncharacterized LOC7481648 
 ppo-u.4   7477199   uncharacterized LOC7477199 
 mtr-u.4   25485790   uncharacterized LOC25485790 
 mtr-u.4   11443728   uncharacterized LOC11443728 

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Top 50 coexpressed genes to 4338280 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3040   Spliceosome  6 177 5.72
 osa3013   Nucleocytoplasmic transport  3 109 2.80
 osa3020   RNA polymerase  2 52 2.27
 osa220   Arginine biosynthesis  1 36 -
 osa1210   2-Oxocarboxylic acid metabolism  1 55 -

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osa:LOC4338280 (uncharacterized LOC4338280) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4338280
osa-r.5
for
4338280
osa-m.8
for
4338280
osa-u.4
for
9267386
osa-u.4
for
112938696
ath-u.4
for
AT3G17460
ath-u.4
for
AT1G09520
gma-u.4
for
102664958
gma-u.4
for
102660270
gma-u.4
for
100778789
sly-u.4
for
101263762
ppo-u.4
for
7481648
ppo-u.4
for
7477199
mtr-u.4
for
25485790
mtr-u.4
for
11443728
1 LOC4335638 SWI/SNF complex component SNF12 homolog 4335638 Os04g0382100 5.4 3.6
 7.2
 0.7
 -0.2
 2.9
2.8
 3.3
1.3
 3.5
1.9
 4.3
3.2
 2.2
1.8
 3.1
1.5
 0.6
-0.8
 1.5
0.4
 3.7
3.4
 1.6
0.5
2 LOC4342266 putative F-box/FBD/LRR-repeat protein At4g03220 4342266 Os07g0118900 4.2 3.7
 4.6
 0.8
0.5
 0.3
-0.1









3 LOC4332437 E3 ubiquitin-protein ligase CSU1 4332437 Os03g0279900 4.1 2.6
 5.7
 0.9
 -0.3
 2.3
 4.4
 0.4
-1.0
 0.7
-0.8
 0.6
0.1
 2.4
 1.9
1.6
 2.6
1.7
 1.3
 -0.5
4 LOC4340875 atherin 4340875 Os06g0316100 4.1 4.1
 4.1
 -0.0
 0.8









5 LOC9271882 protein FAR1-RELATED SEQUENCE 5 9271882 Os07g0496300 4.0 1.9
 6.1
 0.4
 -0.2









6 LOC4349761 protein TRAUCO 4349761 Os11g0146500 4.0 3.2
 4.8
 0.7
0.4
 0.5
0.3
 2.9
 2.0
 2.3
2.2
 3.6
3.4
 3.0
2.4
 3.4
 2.8
1.5
 1.0
0.5
 2.3
 0.7
7 LOC4329902 pre-mRNA-splicing factor ISY1 homolog 4329902 Os02g0602500 3.9 3.6
 4.3
 0.3
 -0.4
 0.8
 0.9
 1.5
1.2
 2.4
1.2
 3.0
0.6
 1.7
 2.6
 1.2
 3.2
 2.6
8 LOC4339711 probable DNA-3-methyladenine glycosylase 2 4339711 Os05g0579100 3.9 4.8
 3.1
 -0.1
 0.1
 2.5
1.7
 3.2
2.9
 2.4
1.8
 3.7
2.5
 1.8
1.3
 4.7
1.3
 3.0
2.4
 -0.3
-1.2
 3.9
1.8
 2.4
1.1
9 LOC4345928 nuclear transcription factor Y subunit C-6-like 4345928 Os08g0496500 3.9 4.2
 3.7
 1.1
0.8
 0.1
0.1
 0.9
0.3
 2.9
2.0
 1.6
1.5
 2.8
2.7
 1.0
0.8
 1.8
1.5
 1.6
1.4
 2.1
2.0
 2.3
1.5
 1.5
0.8
10 LOC4340540 transcription termination factor MTEF1, chloroplastic 4340540 Os06g0224900 3.9 4.0
 3.8
 1.4
0.5
 0.8
0.5




1.1
1.0



11 LOC4335071 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like 4335071 3.8 3.2
 4.5
 0.7
 0.5
 -0.0
 1.5
 3.4
2.6
 3.1
2.2
 2.4
1.4
 2.3
2.2
 1.1
 0.4
 4.7
1.0
 1.4
-0.0
12 LOC4349693 G-rich sequence factor 1 4349693 Os11g0133600 3.8 4.2
 3.3
 1.4
1.2
 0.5
-0.3
 2.0
 3.0
 0.0
-0.1
 0.9
-0.3
 3.0
1.7
 2.7
0.5
 -0.4
 0.2
 2.3
 0.9
13 LOC4330736 uncharacterized LOC4330736 4330736 Os02g0749900 3.7 4.3
 3.2
 1.4
0.5
 0.8
0.5




1.1
1.0



14 LOC4349477 60S ribosomal export protein NMD3 4349477 Os10g0573900 3.7 2.7
 4.7
 0.6
 0.3
 1.7
 3.8
 0.8
-0.2
 1.8
1.3
 0.8
0.2
 1.1
 0.5
 2.0
 5.1
 1.6
15 LOC4337268 ribosomal RNA processing protein 1 homolog 4337268 Os04g0658600 3.7 2.4
 4.9
 1.0
 -0.6
 2.8
 2.9
 2.5
1.6
 3.5
2.8
 1.9
1.4
 1.0
 1.5
 1.7
 4.1
 3.0
16 LOC4329700 trihelix transcription factor ASIL1 4329700 Os02g0565000 3.7 3.0
 4.3
 0.6
-0.3
 0.1
-0.5









17 LOC4347983 barley B recombinant-like protein A 4347983 Os10g0114500 3.7 3.6
 3.8
 0.2
-0.7
 0.2
0.0
 1.5
1.0
 1.1
0.4
 0.6
-0.6
 1.3
0.3
 1.4
0.9
2.4
0.4
 1.2
0.9
 2.5
2.4
 1.4
1.0
18 LOC4344030 probable transcription factor At5g28040 4344030 Os07g0636100 3.6 4.2
 3.1
 0.4
-0.1
 -0.4
-1.0
 1.7
0.2
 2.1
0.4
 0.8
-0.3
 1.9
1.2
 1.2
1.1
 1.8
1.4
 1.5
 -1.3
 3.5
2.5
 1.5
-0.2
19 LOC4333327 multiple organellar RNA editing factor 3, mitochondrial 4333327 Os03g0581600 3.6 4.7
 2.5
 0.7
 0.6
 3.0
 2.5
 2.6
1.2
 1.5
1.0
 1.6
1.3
 1.5
 3.6
 1.8
 1.2
 2.8
20 LOC9266375 calcium homeostasis endoplasmic reticulum protein 9266375 Os06g0682700 3.6 4.9
0.5
 0.6
 2.5
 2.1
 3.5
2.2
 3.1
2.3
 2.1
1.2
 3.2
 4.3
4.3
 1.3
0.9
 3.3
 1.1
21 LOC4331295 DNA-directed RNA polymerases II, IV and V subunit 9B 4331295 Os03g0102200 3.6 2.7
 4.5
 1.0
-0.3
 -0.1
-0.4

0.4
-1.5
 0.2
-0.7
 0.1
-1.5
 -0.3
 0.9
 0.1
 2.2
 2.2
22 LOC4333027 uncharacterized LOC4333027 4333027 Os03g0392400 3.6 2.4
 4.7
 0.1
-0.8
 0.2
-0.6
 3.6
3.3
 4.0
3.9
 2.0
1.8
 2.5
1.9
 2.0
1.5
 4.2
3.6
 2.4
1.6
 1.9
1.0
 4.5
2.8
 2.2
1.9
23 LOC4328057 uncharacterized LOC4328057 4328057 Os02g0113800 3.5 3.0
 4.0











24 LOC4326510 early nodulin-20 4326510 Os01g0939400 3.5 2.4
 4.6
 0.6
 -0.3
 1.6
 0.8
 1.7
 1.8
 0.9
 1.9
 1.3
1.0
 1.3
0.2
 1.8
 1.8
25 LOC4338741 uncharacterized LOC4338741 4338741 Os05g0403400 3.5 3.7
 3.3
 0.7
-0.2
 0.1
-0.1
 1.8
1.7
 1.7
0.7
 2.6
2.4
 3.1
2.8
 1.1
0.7
 -0.2
 1.9
1.4
 2.3
2.3
 3.0
3.0
 1.7
1.5
26 LOC4329163 WD repeat-containing protein 25 4329163 Os02g0319800 3.5 1.8
 5.2
 1.1
 -0.2
 3.0
 3.1
 1.8
1.1
 1.6
0.6
 0.3
0.3
 1.0
 -0.9
 -0.5
 -0.1
 -0.0
27 MAGO2 protein mago nashi homolog 2-like 4351998 OSNPB_120287200 3.5 2.4
 4.6
 1.5
1.4
 0.9
0.4
 0.9
 2.3
 0.8
0.1
 1.2
1.2
 1.1
-0.0
 1.9
 2.9
1.8
 2.8
0.2
 1.0
 1.5
28 LOC4351059 WD repeat-containing protein VIP3 4351059 Os11g0660300 3.5 2.4
 4.5
 0.4
 0.4
 0.5
 2.3
 0.6
0.1
 1.3
0.5
 1.5
1.3
 2.5
0.8
 1.3
 0.7
 2.7
 2.6
29 LOC4340004 barley B recombinant-like protein D 4340004 OSNPB_060130600 3.5 0.9
 6.0
 0.6
 0.2
 2.7
1.7
 3.1
2.2
 1.7
0.9
 1.0
0.5
 0.6
0.3
 1.7
 1.1
1.1
 0.6
0.1
 1.4
0.8
 0.5
0.2
30 LOC4326991 suppressor of mec-8 and unc-52 protein homolog 1 4326991 Os01g0322800 3.4 3.6
 3.2
 1.5
 0.5
 2.2
 1.6
 -0.1
-0.6
 -0.9
-1.1
 -0.2
-0.5
 0.8
 -0.4
 0.6
 0.5
 -0.1
31 LOC4349496 protein HAIKU1-like 4349496 3.4 3.3
 3.5
 0.2
-0.5
 0.3
0.1
 3.4
2.6
 2.1
1.8
 2.2
1.5
 2.9
2.6
 2.6
2.0
 2.4
1.0
 2.4
1.4
 1.8
0.4
 2.4
2.3
 0.3
-0.3
32 LOC9270850 DNA-directed RNA polymerases II and IV subunit 5A 9270850 Os04g0487300 3.4 3.4
 3.3
 2.1
0.1
 0.8
-0.4
 0.8
 3.0
 0.4
-0.4
 2.3
0.7
 2.7
1.3
 2.2
 -0.1
 0.2
 0.0
 0.3
33 LOC4351412 G-rich sequence factor 1 4351412 Os12g0131000 3.3 4.3
1.4
1.2
 0.5
-0.3
 2.0
 3.0
 0.0
-0.1
 0.9
-0.3
 3.0
1.7
 2.7
0.5
 -0.4
 0.2
 2.3
 0.9
34 LOC4347391 nuclear transcription factor Y subunit C-6-like 4347391 Os09g0480700 3.3 1.7
 4.9
 1.1
0.8
 0.1
0.1
 0.9
0.3
 2.9
2.0
 1.6
1.5
 2.8
2.7
 1.0
0.8
 1.8
1.5
 1.6
1.4
 2.1
2.0
 2.3
1.5
 1.5
0.8
35 LOC4342530 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 4342530 Os07g0175100 3.3 2.6
 4.0
 -0.4
 0.1
 2.3
 4.5
 0.1
-0.0
 0.9
0.0
 -0.6
-1.0
 1.7
 -0.2
 -0.6
 0.3
 0.1
36 LOC4330895 replication factor C subunit 3-like 4330895 OSNPB_020775200 3.3 3.0
 3.7
 1.0
 0.1
 3.2
 3.5
 2.1
1.7
 1.2
1.1
 2.9
0.6
 0.8
 1.4
 0.7
 1.7
 2.4
37 LOC4330801 uncharacterized LOC4330801 4330801 Os02g0760400 3.3 3.6
 3.0
 1.2
1.1
 -0.0
-0.2
 0.7
 -0.5
 0.3
0.3
 0.7
0.5
 0.1
-0.8
 -0.2
-0.4
 0.3
 0.5
 -0.1
 1.3
38 LOC4328667 uncharacterized LOC4328667 4328667 Os02g0204000 3.3 2.7
 3.9
 0.7
 -0.3
 2.6
 2.6
 1.2
0.4
 2.0
1.7
 1.6
0.9
 2.6
1.0
 1.4
 1.8
 -1.0
 -0.9
39 LOC4337145 regulation of nuclear pre-mRNA domain-containing protein 1A 4337145 Os04g0636700 3.3 2.5
 4.1
 1.1
 0.1
 4.2
2.1
 3.9
0.4
 1.1
1.0
 1.6
1.5
 2.0
1.7
 2.3
 2.7
2.4
 0.9
0.7
 3.1
 1.6
40 LOC4333045 pre-mRNA-processing factor 17 4333045 Os03g0397500 3.3 2.5
 4.0
 0.3
 0.0
 0.2
 1.1
 3.2
3.0
 4.7
3.9
 2.7
2.6
 3.7
 1.6
1.6
 1.7
0.8
 4.1
3.3
 1.5
1.0
41 LOC4347726 mediator of RNA polymerase II transcription subunit 4 4347726 Os09g0540500 3.3 3.7
 2.8
 1.5
 0.2
 4.0
 5.1
 2.8
1.4
 3.2
2.3
 2.8
2.4
 2.7
1.4
 4.1
 1.5
 3.6
1.7
 1.1
-0.1
42 LOC4332617 DEAD-box ATP-dependent RNA helicase 24-like 4332617 OSNPB_030308500 3.3 2.8
 3.7
 -0.0
 0.3
 0.5
 1.8
 -0.2
-0.3
 1.3
0.8
 1.6
1.2
 1.8
 -0.6
-1.4
 1.1
0.2
 3.3
 -0.5
43 LOC4328237 spliceosome-associated protein 130 A 4328237 Os02g0137400 3.3 1.7
 4.8
 0.1
 -0.3
 0.0
-0.1
 1.0
0.8
 3.4
2.8
 2.6
1.9
 2.0
1.1
 2.7
 0.3
-0.7
 0.5
-0.3
 3.0
1.9
 1.8
0.2
44 LOC4346400 protein DCL homolog, chloroplastic 4346400 Os09g0112400 3.3 1.7
 4.8
 2.0
 0.7









45 LOC4329092 zinc finger CCCH domain-containing protein 15-like 4329092 OSNPB_020301000 3.2 2.7
 3.7
 0.8
 0.4
 2.0
1.8
 1.6
1.6
 0.7
-0.5
 0.5
-0.4
 0.7
0.2
 0.2
 1.8
 -0.3
 1.7
 0.7
46 LOC9270807 small nuclear ribonucleoprotein-associated protein N 9270807 Os07g0166600 3.2 2.4
 4.0
 2.3
 -0.3
 3.7
2.4
 2.8
2.6
 6.3
6.0
 6.6
6.0
 3.2
2.4
 3.4
 3.3
 2.3
 3.1
2.5
 2.7
2.0
47 LOC4342961 nuclear pore complex protein NUP54 4342961 Os07g0295400 3.2 2.4
 4.0
 1.8
 -0.0
 0.6
 1.0
 2.3
0.9
 2.3
2.1
 1.9
1.7
 3.2
 3.4
0.2
 2.8
1.4
 3.2
 3.2
48 LOC4336590 acetylglutamate kinase 4336590 Os04g0550500 3.2 4.3
 2.1
 1.2
0.2
 1.0
1.0
 1.6
 3.5
 4.1
4.0
 5.9
5.5
 2.5
2.2
 1.1
 4.2
2.7
 2.1
2.1
 2.5
 1.7
49 LOC4352707 flowering locus K homology domain-like 4352707 3.2 2.1
 4.4
 0.5
-0.5
 1.0
-0.1
 0.7
 1.7
 1.9
1.4
 3.3
1.8
 2.5
1.7
 3.5
2.1
 1.8
1.2
 2.6
-0.0
 2.8
1.7
 1.0
0.9
50 LOC4334669 uncharacterized LOC4334669 4334669 Os03g0831300 3.2 2.1
 4.3
 1.1
1.1
 0.7
0.6
 2.2
0.4
 4.4
1.4
 0.9
0.6
 1.7
1.4
 1.9
1.1
 2.9
2.0
 0.8
0.8
 -0.5
-0.8
 3.5
2.5
 1.7
-0.5
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