Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4338351   putative lysine-specific demethylase JMJ16 
 osa-r.5   4338351   putative lysine-specific demethylase JMJ16 
 osa-m.8   4338351   putative lysine-specific demethylase JMJ16 
 ath-u.4   MEE27   Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 
 ath-u.4   JMJ18   Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 
 ath-u.4   JMJ14   JUMONJI 14 
 gma-u.4   100814590   lysine-specific demethylase JMJ18 
 gma-u.4   100784581   lysine-specific demethylase JMJ18 
 sly-u.4   101265508   lysine-specific demethylase JMJ18 
 ppo-u.4   18103470   lysine-specific demethylase JMJ18 
 ppo-u.4   18095778   lysine-specific demethylase JMJ18 
 mtr-u.4   25486667   lysine-specific demethylase JMJ18 

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Top 50 coexpressed genes to 4338351 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3060   Protein export  1 57 -
 osa3050   Proteasome  1 65 -
 osa3015   mRNA surveillance pathway  2 115 -
 osa4120   Ubiquitin mediated proteolysis  2 149 -
 osa4144   Endocytosis  2 163 -

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osa:LOC4338351 (putative lysine-specific demethylase JMJ16) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4338351
osa-r.5
for
4338351
osa-m.8
for
4338351
ath-u.4
for
MEE27
ath-u.4
for
JMJ18
ath-u.4
for
JMJ14
gma-u.4
for
100814590
gma-u.4
for
100784581
sly-u.4
for
101265508
ppo-u.4
for
18103470
ppo-u.4
for
18095778
mtr-u.4
for
25486667
1 LOC4352627 probable galacturonosyltransferase 13 4352627 Os12g0578500 5.6 5.3
 5.8
 -0.1
-0.3
 0.8
0.2
 0.2
0.1
 0.4
0.4
 1.4
1.0
 2.4
1.8
 1.5
1.3
 1.3
0.9
 1.0
-0.1
2 LOC4330479 histone-lysine N-methyltransferase SUVR5 4330479 Os02g0708600 5.3 4.9
 5.8
 0.8
 0.7
 2.1
 1.1
0.5
 2.3
1.7
 0.3
 2.3
2.0
 1.5
1.1
 2.0
3 LOC4330429 uncharacterized protein At1g51745 4330429 Os02g0700000 5.1 3.8
 6.3
 0.0
 2.6
 2.9
 0.8
0.6
 0.6
0.5
 2.1
0.5
 2.1
1.8
 2.0
1.5
 2.4
2.2
4 LOC4327399 transcription factor MYB3R-2-like 4327399 Os01g0841500 4.9 4.7
 5.1
 0.5
-0.2
 2.7
2.1
 0.7
0.2
 -0.4
-0.6
 -0.2
-0.5
 0.7
 1.9
 2.3
 3.1
5 LOC4335112 probable E3 ubiquitin-protein ligase HIP1 4335112 Os04g0185500 4.8 3.9
 5.8








6 LOC9272272 uncharacterized protein At1g51745 9272272 Os04g0599100 4.7 4.1
 5.4
 0.0
 2.6
 2.9
 0.8
0.6
 0.6
0.5
 2.1
0.5
 2.1
1.8
 2.0
1.5
 2.4
2.2
7 LOC4346320 protein HESO1 4346320 Os08g0559900 4.7 4.7
 4.8
 0.1
 0.8
 2.2
 1.2
 0.0
 1.1
0.0

0.2
8 LOC4335414 protein TRANSPARENT TESTA 9 4335414 Os04g0298600 4.6 5.7
 3.5
 -1.0
 2.9
 1.5
 -0.6
-0.8
 0.2
-0.6
 -0.2
 1.2
0.2
 1.1
0.8
 1.1
0.5
9 LOC4337793 VIN3-like protein 1 4337793 Os05g0145400 4.5 3.9
 5.1
 -0.7
 1.8
 0.1
 1.7
1.4
 2.4
1.5
 0.8
 1.3
-0.0
 1.1
0.1
 1.5
10 LOC4334494 serine/threonine-protein phosphatase PP2A-2 catalytic subunit-like 4334494 OSNPB_030805300 4.4 3.7
 5.0
 0.4
-0.1
 0.6
-0.1
 1.8
1.1
 -0.3
-0.5
 0.1
0.0
 0.6
0.6
 1.5
1.0
 0.9
0.2
 0.1
-0.3
11 LOC4347782 bromodomain-containing protein 4A 4347782 Os09g0550000 4.3 3.3
 5.4
 0.3
-0.0
 1.6
1.3
 1.3
0.5
 0.7
0.4
 0.1
-0.0
 2.3
1.5
 2.1
2.0
 1.9
1.7
 2.8
12 LOC4330691 uncharacterized LOC4330691 4330691 Os02g0742000 4.2 4.5
 3.9
 0.1
-0.4
 3.5
3.0
 3.6
3.1
 0.4
0.4
 0.5
0.4
 1.7
1.1
 2.6
2.4
 2.0
1.4
 1.6
13 LOC4325391 MACPF domain-containing protein At4g24290 4325391 Os01g0958700 4.0 4.0
 4.0
 -0.9
 0.6
 -0.2
 -0.6
-0.7
 -0.2
-0.4
 0.8
-0.3
 0.9
0.5
 0.9
0.6
 2.3
1.1
14 LOC4349773 uncharacterized LOC4349773 4349773 Os11g0148400 4.0 3.5
 4.5
 -0.9
 0.9
 0.6
 0.2
-0.2
 0.2
-0.6
 0.1
 1.8
0.9
 2.5
0.8
 1.0
15 LOC4344968 uncharacterized LOC4344968 4344968 Os08g0224200 4.0 4.1
 3.8
 -1.1
 0.9
 1.3
 -0.6
-1.0
 -1.0
-1.4
 1.1
 0.5
-0.5
 0.1
-0.8
 0.5
16 LOC4333157 uncharacterized LOC4333157 4333157 Os03g0425800 4.0 2.3
 5.7
 -0.4
-0.4
 3.7
3.3
 1.3
-0.3
 -0.1
-0.3
 -0.1
-0.4
 0.8
0.8
 3.0
2.7
 1.8
1.2
 1.4
17 LOC4344365 uncharacterized LOC4344365 4344365 Os07g0690300 4.0 2.7
 5.3
 -0.4
 3.4
 1.1
 -0.4
-0.5
 -0.3
-0.6
 1.1
 1.7
0.4
 1.2
0.8
 1.2
18 LOC4330726 RINT1-like protein MAG2 4330726 Os02g0748100 4.0 3.5
 4.5
 -0.3
 2.3
 1.7
 0.3
-0.1
 -0.0
-0.2
 -0.5
 1.5
 0.6
 1.2
19 LOC4330865 uncharacterized LOC4330865 4330865 Os02g0770600 4.0 4.5
 3.4
 -0.2
-0.5
 2.5
0.6
 0.7
0.4
 1.4
0.5
 1.3
0.1
 0.9
0.6
 0.6
0.5
 1.0
1.0
 1.0
0.4
20 LOC4335834 exocyst complex component SEC5B 4335834 Os04g0421900 4.0 4.6
 3.3
 0.3
-0.6
 0.9
0.0
 3.3
2.0
 -0.5
-0.7
 -0.4
-0.7
 0.1
-0.9
 2.2
1.3
 1.3
0.6
 1.2
21 LOC4329956 histone-lysine N-methyltransferase ASHR3-like 4329956 3.9 4.2
 3.5
 0.5
 0.5
 -0.1
 0.8
 1.1
 0.2

0.3
22 LOC4340851 protein S-acyltransferase 11 4340851 Os06g0308900 3.8 3.9
 3.7
 -0.9
 0.1
 -1.0
 -0.7
 -1.5
 -0.2
 1.9
 0.8
 0.4
0.3
23 LOC4332575 pentatricopeptide repeat-containing protein At5g50990 4332575 Os03g0301400 3.8 3.2
 4.5
 -1.1
 0.1
 0.2
 0.8
 0.3
 0.2
 0.8
 0.1
 0.3
24 LOC4336357 E3 ubiquitin-protein ligase WAV3 4336357 Os04g0508800 3.8 3.5
 4.1








25 LOC4337024 F-box/WD-40 repeat-containing protein At5g21040 4337024 Os04g0619700 3.8 3.3
 4.3
 0.3
 1.8
 1.9
 0.2
-0.2
 0.5
0.3
 0.4
0.3
 1.0
 1.1
 1.4
26 LOC9266581 WD repeat-containing protein 26 homolog 9266581 Os02g0294600 3.8 4.5
 3.0
 -0.3
 2.7
 3.3
 0.2
0.0
 -0.1
-0.4
 0.8
0.3
 1.0
1.0
 1.3
0.9
 0.6
-0.6
27 LOC4326133 paired amphipathic helix protein Sin3-like 3 4326133 Os01g0109700 3.7 3.8
 3.6
 0.8
0.5
 3.6
2.5
 4.2
3.1
 0.4
0.3
 0.2
0.1
 1.0
0.4
 2.5
1.1
 2.0
1.2
 2.7
2.4
28 LOC4331372 zinc finger CCCH domain-containing protein 44 4331372 Os03g0112600 3.7 4.1
 3.3








29 LOC4338043 lysine-specific demethylase JMJ703-like 4338043 OSNPB_050196500 3.7 3.4
 4.0
 -0.2
 2.8
 2.0
 0.8
0.1
 0.8
-0.2
 2.5
 2.8
2.4
 1.7
1.5
 1.5
30 LOC4349005 uncharacterized LOC4349005 4349005 Os10g0497000 3.7 3.3
 4.0
 0.2
-0.2
 3.3
0.9
 4.6
2.6
 -0.2
-0.4
 -0.1
-0.7
 -0.2
 1.8
0.8
 1.7
0.8
 1.5
31 LOC4337175 cullin-3B 4337175 Os04g0643000 3.6 3.0
 4.2
 -0.6
-1.0
 3.0
2.3
 2.0
1.8
 -0.8
-0.8
 -0.0
-0.1
 1.0
1.0
 2.1
0.7
 1.5
0.3
 1.8
0.9
32 LOC4326281 probable phosphoinositide phosphatase SAC9 4326281 Os01g0355600 3.6 4.0
 3.2
 -0.6
 0.7
 1.1
 0.0
-0.3
 -0.1
-1.1
 0.1
 4.5
 2.2
 1.6
33 LOC4326008 probable ubiquitin-conjugating enzyme E2 23 4326008 Os01g0125900 3.6 3.2
 4.0
 -0.9
 2.3
 2.7
 0.1
-0.6
 -0.0
-0.3
 0.6
 3.7
3.2
 2.6
2.3
 1.6
34 LOC4334009 zinc finger BED domain-containing protein RICESLEEPER 2-like 4334009 OSNPB_030733400 3.6 5.3
 1.9
 -0.5
 0.8
 3.5
 0.8
0.3
 1.0
0.9
 1.2
1.0
 1.8
0.9
 1.1
1.0
 2.0
1.3
35 LOC4324837 uncharacterized LOC4324837 4324837 Os01g0879400 3.5 2.7
 4.4
 -0.0
-0.4
 0.2
-1.1
 0.7
0.0
 0.7
-0.5
 1.4
-0.7
 1.0
-1.4
 -0.1
 -0.6
 0.7
0.1
36 LOC4326988 protein transport protein SEC23 4326988 Os01g0321700 3.5 1.8
 5.3
 -0.4
 0.6
 2.2
 0.1
0.1
 0.2
0.1
 0.3
 1.4
1.2
 0.8
0.5
 1.5
37 LOC4347892 R3H domain-containing protein 1 4347892 Os09g0568000 3.5 3.4
 3.6


-0.3
-0.7
 -0.8
-1.8
 0.4
 1.1
0.3
 1.1
0.5
 2.3
1.1
38 LOC4328595 brefeldin A-inhibited guanine nucleotide-exchange protein 1 4328595 Os02g0193800 3.5 2.8
 4.3
 -0.5
-0.7
 0.0
-0.2
 3.3
-0.2
 0.7
-0.1
 1.2
0.3
 0.0
 2.5
1.7
 1.6
1.2
 1.6
39 LOC4332351 uncharacterized LOC4332351 4332351 Os03g0265700 3.5 4.2
 2.8
 0.2
 -0.1
 3.9
 -0.4
-0.7
 0.6
-0.1
 0.8
 1.5
 1.0
 0.4
40 LOC4341448 26S proteasome regulatory subunit 8 homolog A 4341448 Os06g0600100 3.5 2.7
 4.3
 0.2
-0.2
 0.3
-1.4
 2.9
1.7
 -0.9
-1.0
 -0.6
-1.1
 0.4
0.3
 -0.3
-1.1
 -0.1
-0.4
 0.3
41 LOC4324904 signal recognition particle subunit SRP72 4324904 Os01g0889000 3.5 3.6
 3.4
 -0.3
-1.3
 0.6
0.0
 2.3
0.8
 0.7
0.1
 1.2
0.1
 0.5
 1.2
 0.5
 0.3
42 LOC4325185 serine/threonine-protein phosphatase 7 long form homolog 4325185 Os01g0167800 3.5 2.7
 4.3








43 LOC4335667 uncharacterized LOC4335667 4335667 Os04g0388800 3.5 3.6
 3.4
 0.3
-0.2
 2.7
2.0
 4.3
2.6
 0.2
-0.2
 0.2
0.2
 1.0
0.6
 1.8
1.6
 1.5
1.2
 2.5
1.8
44 LOC4350030 extra-large guanine nucleotide-binding protein 3 4350030 Os11g0206700 3.5 2.5
 4.5
 -0.1
 2.0
 1.6
 -0.6
-1.0
 -0.0
-0.1
 0.2
0.2
 1.0
0.7
 0.3
0.0
 0.2
45 LOC4323900 protein FAM91A1 4323900 Os01g0303200 3.5 4.9
-1.9
 -0.2
 2.5
 0.1
-0.6
 0.3
0.1
 1.3
 1.7
 0.7
 1.4
46 LOC4323992 lisH domain and HEAT repeat-containing protein KIAA1468 homolog 4323992 Os01g0514300 3.5 3.7
 3.3
 -0.6
 1.7
 0.8
 0.2
 0.1
 0.6
 1.3
 1.2
 0.7
47 LOC4345227 protein SMG7 4345227 Os08g0305300 3.5 4.3
 2.6
 -0.7
 2.6
 2.4
 0.5
-0.6
 1.0
0.2
 1.1
0.6
 4.4
3.0
 3.5
1.7
 2.0
1.5
48 LOC4345560 EVI5-like protein 4345560 Os08g0412600 3.5 3.3
 3.6
 -0.4
-0.8
 2.5
1.6
 -0.4
-1.2
 1.2
1.1
 0.8
0.2
 0.8
 1.1
0.9
 0.8
0.7
 -0.2
49 LOC4330404 lysine-specific demethylase JMJ706-like 4330404 Os02g0696700 3.5 4.3
 2.6
 -0.9
 2.6
 0.3
 1.1
0.6
 1.9
1.4
 2.4
0.6
 4.2
3.4
 3.7
2.3
 0.8
50 LOC4330061 ADP-ribosylation factor GTPase-activating protein AGD2 4330061 Os02g0632500 3.5 3.2
 3.7








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