Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4338708   preprotein translocase subunit SCY2, chloroplastic 
 osa-r.5   4338708   preprotein translocase subunit SCY2, chloroplastic 
 osa-m.8   4338708   preprotein translocase subunit SCY2, chloroplastic 
 ath-u.4   SCY2   SecY protein transport family protein 
 gma-u.4   100803256   preprotein translocase subunit SCY2, chloroplastic 
 sly-u.4   101255133   preprotein translocase subunit SCY2, chloroplastic 
 ppo-u.4   7480700   preprotein translocase subunit SCY2, chloroplastic 
 mtr-u.4   25499111   preprotein translocase subunit SCY2, chloroplastic 

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Top 50 coexpressed genes to 4338708 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa970   Aminoacyl-tRNA biosynthesis  2 70 2.02
 osa340   Histidine metabolism  1 17 -
 osa450   Selenocompound metabolism  1 19 -
 osa230   Purine metabolism  1 91 -
 osa3013   Nucleocytoplasmic transport  2 109 -

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osa:LOC4338708 (preprotein translocase subunit SCY2, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4338708
osa-r.5
for
4338708
osa-m.8
for
4338708
ath-u.4
for
SCY2
gma-u.4
for
100803256
sly-u.4
for
101255133
ppo-u.4
for
7480700
mtr-u.4
for
25499111
1 LOC4337651 thylakoid membrane protein TERC, chloroplastic 4337651 Os05g0121200 4.9 3.0
 6.7
 2.8
 1.9
1.6
 1.7
 1.1
 1.8
2 LOC4331793 tRNA-specific 2-thiouridylase MnmA 4331793 Os03g0174600 4.6 2.7
 6.5
 3.6
 4.0
 2.4
 3.8
 1.0
3 LOC4331537 ankyrin repeat domain-containing protein, chloroplastic 4331537 Os03g0135600 4.6 4.2
 4.9
 2.3
 2.8
2.1
 1.9
 2.8
1.6
 2.5
1.8
4 LOC4330712 ATPase ARSA1 4330712 Os02g0745000 4.5 5.4
 3.5
 4.3
 2.3
2.0
 0.6
-0.4
 2.3
1.2
 2.1
5 LOC4326934 uncharacterized LOC4326934 4326934 Os01g0702400 4.5 3.8
 5.1
 0.3
 1.4
1.1
 0.2
0.6
6 LOC4330719 uncharacterized LOC4330719 4330719 Os02g0745800 4.4 4.3
 4.4
 2.3
 0.8
-0.1
 -0.1
 0.0
 -0.9
7 LOC4352686 uncharacterized LOC4352686 4352686 Os12g0594200 4.3 5.8
 2.9
 2.6
 2.1
 0.5
 1.9
 2.1
8 LOC4348618 ribosomal RNA small subunit methyltransferase I 4348618 Os10g0414500 4.3 3.4
 5.2
 2.9
 2.6
 1.2
 1.4
 1.8
9 LOC4332791 putative GTP diphosphokinase RSH1, chloroplastic 4332791 OSNPB_030340900 4.2 5.0
 3.4
 2.0
 4.3
2.4
 2.8
2.4
 0.9
 3.4
10 LOC4327396 protein ESMERALDA 1 4327396 Os01g0841200 4.2 4.1
 4.3
 0.6
-0.2
 1.9
1.2
 0.2
-0.4
 0.2
-0.1
 1.3
-0.8
11 LOC4328146 protein LOW PSII ACCUMULATION 2, chloroplastic 4328146 Os02g0125000 4.2 3.0
 5.3
 -0.4
 0.3
 0.4
 0.5
 1.7
12 LOC4332018 methionine--tRNA ligase, chloroplastic/mitochondrial 4332018 Os03g0209600 4.2 5.8
 2.5
 2.9
 2.9
1.5
 1.9
 1.9
 2.3
13 LOC9269094 tyrosine--tRNA ligase 1, cytoplasmic 9269094 Os01g0867100 4.1 3.2
 5.0
 1.5
1.4
 2.0
1.2
 1.1
 0.8
 0.3
-0.3
14 LOC4349490 uncharacterized LOC4349490 4349490 Os10g0575800 4.1 3.9
 4.3
 1.7
 1.4
 1.4
 2.1
 0.7
15 LOC4350677 transportin MOS14 4350677 Os11g0543800 4.1 3.8
 4.3
 1.7
 1.8
1.3
 0.8
 1.8
 2.2
16 LOC4346498 D-aminoacyl-tRNA deacylase 4346498 Os09g0248000 4.1 3.3
 4.8
 1.6
 0.8
 0.6
 0.7
 -0.2
17 LOC4352421 uncharacterized LOC4352421 4352421 4.0 3.9
 4.1
2.9
2.4
 0.5
 3.2
0.3
 -0.2
18 LOC4342387 DEAD-box ATP-dependent RNA helicase 53-like 4342387 OSNPB_070143700 4.0 4.8
 3.1
 1.7
0.8
 2.3
1.4
 1.3
-0.3
 4.8
2.9
 2.3
0.0
19 LOC4338388 pentatricopeptide repeat-containing protein At5g67570, chloroplastic 4338388 Os05g0315100 4.0 5.4
1.4
 3.3
2.2
 3.0
 3.3
 2.6
20 LOC4323839 DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like 4323839 OSNPB_010970600 4.0 5.5
2.7
 2.7
 1.0
 2.3
 2.0
1.7
21 LOC9267223 uncharacterized exonuclease domain-containing protein At3g15140 9267223 Os06g0353400 3.9 3.0
 4.9
 1.2
 2.7
 1.1
 0.1
 0.9
22 LOC4342886 protein argonaute 16-like 4342886 3.9 5.6
 2.2
 1.5
1.5
 2.4
2.3
 2.6
1.2
 1.4
0.1
 2.2
1.6
23 LOC4332158 GTP-binding protein At2g22870 4332158 Os03g0232500 3.9 3.0
 4.8
 3.5
 3.6
1.7
 1.8
 0.9
 1.8
24 LOC4338505 TATA box-binding protein-associated factor RNA polymerase I subunit B 4338505 Os05g0352700 3.9 4.5
 3.2
 1.2
 0.1
 -0.1
-1.1
 0.3
 2.0
0.9
25 LOC4338341 uncharacterized LOC4338341 4338341 Os05g0299200 3.9 2.9
 4.9
 6.0
 2.1
 0.1
 1.1
 1.7
26 LOC9269607 uncharacterized LOC9269607 9269607 Os02g0266500 3.8 3.7
 3.9
 4.0
 3.1
 1.1
 2.9
 2.2
27 LOC4341994 zinc finger CCCH domain-containing protein 46-like 4341994 OSNPB_060704300 3.8 2.9
 4.7
 2.7
 1.3
0.9
 0.5
 1.3
 2.0
28 LOC4341105 alpha-glucan water dikinase, chloroplastic 4341105 Os06g0498400 3.8 4.9
 2.7
 0.5
 2.2
2.1
 2.1
 4.4
1.5
 0.8
29 LOC4341109 uncharacterized LOC4341109 4341109 Os06g0499000 3.8 4.0
 3.6
 3.3
 3.5
2.1
 1.1
 0.6
 2.3
30 LOC9271593 lysine-specific demethylase 5B 9271593 Os06g0731600 3.8 5.3
2.1
 2.8
2.1
 0.6
 0.5
 1.2
31 LOC4328144 uncharacterized LOC4328144 4328144 Os02g0124700 3.8 5.2
 2.4
 0.4
 0.0
-0.6
 0.9
 1.0
-0.3
 0.4
32 LOC4336596 O-fucosyltransferase 29 4336596 Os04g0551300 3.8 2.9
 4.7
 0.0
 1.2
0.3
 1.4
-0.4
 -0.5
-1.0
 1.8
0.3
33 LOC4347515 TITAN-like protein 4347515 Os09g0506900 3.8 3.8
 3.7
 3.9
 1.9
 0.0
 1.9
-0.1
 0.6
0.2
34 LOC4338725 protein ABCI12, chloroplastic 4338725 Os05g0400600 3.8 3.3
 4.2
 2.7
 2.5
 1.9
 0.6
 2.2
35 LOC4331958 protein CLT2, chloroplastic 4331958 Os03g0199000 3.8 4.7
 2.8
 2.8
 2.9
2.5
 0.3
2.6
36 LOC4330879 protein NRDE2 homolog 4330879 Os02g0772500 3.7 4.3
 3.2
 2.4
0.8
 0.7
-0.0
 0.7
 1.4
 -0.6
37 LOC4326709 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 4326709 Os01g0223800 3.7 4.4
 3.1




38 LOC4327735 carbon catabolite repressor protein 4 homolog 6 4327735 Os01g0610600 3.7 4.6
 2.9
 1.9
 1.4
 0.5
 2.6
 0.1
39 LOC4339468 SWR1-complex protein 4 4339468 Os05g0540800 3.7 3.2
 4.2
 1.0
 2.4
1.6
 1.2
 1.3
 2.5
40 LOC4344363 BRCT domain-containing protein At4g02110-like 4344363 3.7 2.6
 4.7
 -0.5
 0.8
0.3
 0.1
 0.2
0.2
 -1.2
41 LOC4328206 pentatricopeptide repeat-containing protein At4g04790, mitochondrial 4328206 Os02g0132600 3.7 2.2
 5.2
 3.1
2.2
 2.2
1.4
 1.9
 2.0
1.6
 0.9
42 LOC4327007 probable lipid-A-disaccharide synthase, mitochondrial 4327007 Os01g0752600 3.7 1.5
 5.8
 1.9
 1.7
 1.5
 1.5
 2.4
43 LOC4329554 uncharacterized protein At5g03900, chloroplastic 4329554 Os02g0533000 3.6 2.7
 4.6
 3.0
 3.9
3.9
 1.7
 4.0
 3.0
44 LOC4345883 copper-transporting ATPase PAA1, chloroplastic 4345883 Os08g0486100 3.6 4.1
 3.1
 1.1
 2.9
0.8
 0.8
 1.2
-0.2
 1.9
45 LOC4349502 glycerol-3-phosphate acyltransferase, chloroplastic 4349502 Os10g0577900 3.6 4.0
 3.2
 2.0
 1.3
1.2
 1.6
 0.6
 -0.2
46 LOC4325647 uncharacterized LOC4325647 4325647 Os01g0692600 3.6 4.4
 2.8
 0.5
 0.8
0.7
 0.9
0.5
 2.7
2.0
 1.1
0.8
47 LOC4337007 imidazoleglycerol-phosphate dehydratase 4337007 Os04g0617800 3.5 1.9
 5.2
 1.7
0.7
 1.6
 -0.2
 1.2
0.7
 1.1
48 LOC9266565 protein root UVB sensitive 3 9266565 Os03g0213700 3.5 4.5
 2.5
 4.8
 1.3
 0.5
 0.5
 1.1
49 LOC4326018 putative pentatricopeptide repeat-containing protein At3g01580 4326018 Os01g0357800 3.5 4.4
 2.5



0.4
50 LOC4328790 nuclear poly(A) polymerase 4 4328790 Os02g0227400 3.5 3.8
 3.1
 -0.6
-1.0
 0.9
0.5
 0.9
0.3
 4.0
2.4
 0.3
-0.3
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