Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4338930   ferredoxin-6, chloroplastic 
 osa-r.5   4338930   ferredoxin-6, chloroplastic 
 osa-m.8   4338930   ferredoxin-6, chloroplastic 
 osa-u.4   9270637   ferredoxin, root R-B1 
 osa-u.4   4334701   ferredoxin-3, chloroplastic 
 ath-u.4   FD3   ferredoxin 3 
 gma-u.4   100499711   ferredoxin 3-like 
 gma-u.4   100305886   putative ferredoxin 
 gma-u.4   100500583   uncharacterized LOC100500583 
 sly-u.4   101266472   ferredoxin, root R-B2 
 sly-u.4   101245166   ferredoxin, root R-B2 
 ppo-u.4   7486907   ferredoxin, root R-B1 
 ppo-u.4   7477164   ferredoxin, root R-B1 
 ppo-u.4   18098115   ferredoxin, root R-B2 
 mtr-u.4   11445243   ferredoxin, root R-B1 
 mtr-u.4   25485576   ferredoxin, root R-B1 
 mtr-u.4   25485574   ferredoxin, root R-B1 

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Top 50 coexpressed genes to 4338930 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa1200   Carbon metabolism  5 257 3.69
 osa710   Carbon fixation in photosynthetic organisms  3 72 3.33
 osa480   Glutathione metabolism  3 103 2.87
 osa270   Cysteine and methionine metabolism  3 110 2.79
 osa190   Oxidative phosphorylation  3 140 2.49

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osa:LOC4338930 (ferredoxin-6, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4338930
osa-r.5
for
4338930
osa-m.8
for
4338930
osa-u.4
for
9270637
osa-u.4
for
4334701
ath-u.4
for
FD3
gma-u.4
for
100499711
gma-u.4
for
100305886
gma-u.4
for
100500583
sly-u.4
for
101266472
sly-u.4
for
101245166
ppo-u.4
for
7486907
ppo-u.4
for
7477164
ppo-u.4
for
18098115
mtr-u.4
for
11445243
mtr-u.4
for
25485576
mtr-u.4
for
25485574
1 LOC4334338 ferredoxin--NADP reductase, root isozyme, chloroplastic-like 4334338 OSNPB_030784700 9.2 10.6
 7.8
 2.6
0.7
 4.0
3.4
 7.6
7.1
 2.8
1.5
 3.4
2.4
 7.3
5.8
 2.1
 3.2
 -0.3
 3.2
 8.5
 1.7
 6.9
 2.2
2 LOC4342988 glucose-6-phosphate 1-dehydrogenase 2, chloroplastic 4342988 Os07g0406300 6.6 6.5
 6.7
 4.4
0.4
 0.8
-1.9
 7.0
5.8
 1.1
0.3
 0.1
-0.0
 3.4
3.2
 3.0
1.8
 0.3
-1.8
 0.2
0.2
 2.3
0.1
 11.5
1.3
 1.4
0.7
 8.7
5.2
 1.0
0.4
3 LOC4326014 ferredoxin--nitrite reductase, chloroplastic-like 4326014 OSNPB_010357100 5.2 5.8
 4.6
 7.4
4.4
 -0.3
-1.5
 4.9
 -0.1
-0.5
 0.4
-0.0
 2.1
1.9
 5.5
1.3
 2.3
-0.2
 -0.4
 0.1
 11.1
 -0.6
 6.9
 0.8
4 LOC4350528 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic-like 4350528 OSNPB_110484500 5.1 7.7
 2.6
 3.6
-0.0
 3.0
0.5
 8.9
5.3
 1.9
1.0
 4.6
3.3
 3.8
2.7
 2.5
1.5
 3.7
1.7
 1.6
0.9
 1.7
0.6
 7.3
2.3
 2.3
0.8
 5.6
-1.5
 2.3
1.3
5 LOC4335896 probable L-ascorbate peroxidase 7, chloroplastic 4335896 OSNPB_040434800 4.8 4.7
 4.8
 3.4
0.5
 3.7
0.9
 1.6
0.3
 0.2
-0.6
 2.7
1.0
 1.4
0.6
 2.1
0.4
 2.0
-0.6
 0.7
-0.6
 0.2
-1.1
 0.9
-0.6
 1.7
 1.8
 0.3
6 LOC4330867 nitrate reductase [NAD(P)H] 4330867 Os02g0770800 4.7 4.9
 4.5
 4.3
1.9
 0.2
-0.7
 2.8
2.6
 -0.2
-1.1
 1.8
1.0
 2.5
2.2
 3.2
 -0.9
 0.1
-0.3
 0.9
-1.1
 8.2
4.7
 1.2
-0.5
 5.9
5.5
 0.5
-0.2
7 LOC4326671 uroporphyrinogen-III C-methyltransferase 4326671 Os01g0631200 4.4 5.1
 3.7
 4.3
 -0.1
 5.5
 1.0
-0.1
 0.5
0.3
 3.0
1.5
 2.9
 0.5
 -1.8
 -0.0
 10.8
 1.1
-0.4
 7.8
2.2
 0.6
0.3
8 LOC4344670 monodehydroascorbate reductase 5, chlorplastic-like 4344670 OSNPB_080151800 4.3 4.9
 3.6
 2.4
 1.0
 3.5
 -0.6
 -0.2
 2.1
 2.4
 2.4
 -0.3
 -0.4
 4.8
 -0.2
 9.0
 1.6
9 LOC4327423 malate dehydrogenase, chloroplastic 4327423 Os01g0829800 4.2 6.2
 2.1
 0.7
-0.0
 2.6
1.2
 3.5
 3.5
1.6
 1.6
0.5
 3.9
1.8
 2.2
-0.4
 2.3
0.1
 0.7
0.6
 1.2
-0.1
 1.3
0.0
 3.6
 1.2
 -0.0
10 LOC4334701 ferredoxin-3, chloroplastic 4334701 Os03g0835900 4.1 5.4
 2.7
 2.6
0.3
 4.1
0.3
5.9
2.6
 7.2
1.9
 7.2
2.6
 2.0
1.9
 1.5
0.8
 1.8
1.0
 5.2
1.8
 4.9
1.4
 1.6
0.7
 0.7
0.7
 2.7
0.7
11 LOC4344834 glucose-6-phosphate/phosphate translocator 2, chloroplastic 4344834 Os08g0187800 4.0 3.9
 4.1
 -0.2
-0.3
 2.5
0.2
 3.7
0.7
 1.4
1.1
 1.7
1.4
 2.7
2.6
 2.8
-0.8
 1.3
0.9
 0.3
-0.1
 0.3
-0.2
 0.9
0.8
 0.8
0.5
 1.5
0.2
 1.9
-1.1
12 LOC4326831 mitochondrial thiamine diphosphate carrier 2 4326831 Os01g0934200 3.8 3.3
 4.3
 2.3
 1.0
 2.2
-0.5
 0.9
0.9
 0.2
0.1
 1.3
0.2
 0.9
-0.0
 -0.2
-1.5
 -0.2
-0.4
 -0.6
-0.6
 0.3
0.2
 -0.3
-0.9
 0.4
-1.0
 1.3
1.0
13 LOC4333430 LOB domain-containing protein 38 4333430 Os03g0609500 3.8 4.5
 3.1
 5.3
1.6
 1.0
-0.9
 2.9
2.1
 0.5
-0.5
 1.1
0.1
 0.9
0.9
 1.4
1.0
 0.4
0.1
 0.9
0.8
 1.1
0.8
 3.8
3.5
 1.5
0.9
 6.5
2.5
 1.6
0.9
14 LOC4345795 nitrate reductase [NADH] 1-like 4345795 OSNPB_080468100 3.8 3.0
 4.6
 4.3
1.9
 0.2
-0.7
 2.8
2.6
 -0.2
-1.1
 1.8
1.0
 2.5
2.2
 3.2
 -0.9
 0.1
-0.3
 0.9
-1.1
 8.2
4.7
 1.2
-0.5
 5.9
5.5
 0.5
-0.2
15 LOC4346137 nuclear transport factor 2-like 4346137 OSNPB_080532300 3.7 4.9
 2.4
 0.4
-0.1
 4.8
-0.4
 3.6
1.6
 2.3
1.7
 3.0
1.6
 2.8
2.7
 0.6
0.5
 3.1
1.6
 0.7
0.4
 3.4
2.6
 1.0
0.6
 2.2
1.3
 -0.5
-1.0
 3.2
1.5
16 LOC4337318 uncharacterized LOC4337318 4337318 Os04g0665600 3.6 3.6
 3.7
 3.2
 0.3











17 LOC4341266 ras-related protein RIC2-like 4341266 OSNPB_060551400 3.6 4.5
 2.8
 0.7
0.6
 3.6
1.0
 2.0
1.1
 2.6
2.3
 2.4
2.1
 1.9
1.9
 0.1
-0.2
 2.8
2.8
 0.9
0.8
 3.2
2.0
 0.8
0.6
 3.2
2.3
 0.2
0.2
 2.9
2.7
18 LOC4337853 importin subunit alpha-1b-like 4337853 Os05g0155601 3.6 4.6
 2.6
 0.2
-0.1
 2.2
0.8
 1.4
1.1
 1.2
1.0
 0.9
0.8
 1.9
1.9
 0.7
0.1
 0.9
0.5
 0.4
0.4
 1.1
1.0
 0.5
0.3
 2.1
1.9
 -0.6
-0.7
 1.9
1.3
19 LOC4337961 uncharacterized LOC4337961 4337961 Os05g0176600 3.6 4.9
 2.2
 0.1
 2.5
 2.3
 0.9
 1.3
 3.4
 0.3
 1.0
 0.2
 1.7
 -0.3
 0.9
 0.2
 0.7
20 LOC4325621 aspartate aminotransferase, cytoplasmic-like 4325621 OSNPB_010760600 3.5 2.3
 4.8
 -1.1
 3.5
 1.7
1.2
 3.3
0.6
 1.1
0.7
 2.9
1.7
 0.8
0.3
 0.7
0.2
 0.9
0.3
 2.8
0.9
 1.3
-0.3
 1.5
 0.1
 1.9
21 LOC4341459 uncharacterized protein At2g34160 4341459 Os06g0602600 3.5 2.9
 4.0
 0.7
-0.4
 1.8
1.4
 1.1
0.6
 0.5
0.4
 1.6
0.9
 1.5
1.1
 0.4
-0.6
 3.0
1.9
 0.4
0.3
 1.8
1.3
 0.2
-0.3
 3.7
2.2
 0.3
-0.4
 2.2
1.7
22 LOC4326903 calmodulin-3-like 4326903 OSNPB_010279300 3.5 2.9
 4.0
 0.3
0.0
 3.3
2.5
 2.4
2.4
 2.0
1.9
 4.3
3.8
 5.1
2.4
 1.2
0.5
 6.3
5.7
 0.7
0.7
 4.1
2.0
 2.0
1.0
 3.3
2.5
 0.8
0.1
 2.2
1.8
23 LOC4325564 cytochrome P450 710A1 4325564 Os01g0211600 3.4 4.4
 2.5
 1.6
0.4
 3.1
0.3
 1.2
0.5
 1.3
1.0
 1.5
0.9
 1.4
0.4
 1.3
 -1.2


1.8
 0.6
 -0.1
24 LOC4347723 acyl carrier protein 2, chloroplastic 4347723 Os09g0539800 3.4 3.2
 3.6
 1.2
0.6
 4.2
4.1
 4.8
1.5
 2.7
2.6
 2.2
2.0
 4.9
4.0
 1.3
0.7
 4.2
3.2
 1.5
0.6
 2.7
2.2
 0.8
0.2
 3.1
2.8
 0.3
0.2
 1.3
1.2
25 LOC4333811 alkaline ceramidase 4333811 Os03g0698900 3.4 3.2
 3.5
 -0.7
 2.0
 0.8
 0.5
-0.1
 -0.3
-1.0
 1.0
0.6
 -0.5
-0.8
 1.4
-0.3
 1.7
1.5
 0.5
0.3
 0.2
0.2
 2.7
0.9
 -0.1
-0.8
 2.2
1.8
26 LOC4331207 V-type proton ATPase subunit F 4331207 Os02g0824700 3.3 3.2
 3.5
 0.4
-0.3
 2.3
1.9
 0.9
 2.1
1.3
 2.1
1.4
 2.1
1.0
 -0.0
 3.0
 -0.3
 2.7
 0.2
 0.8
 0.1
 1.6
27 LOC4352566 importin subunit beta-1 4352566 Os12g0568800 3.3 2.3
 4.4
 -0.5
 1.5
 0.5
 0.9
0.4
 0.4
0.3
 1.4
1.2
 1.3
1.0
 0.4
-0.2
 0.3
-0.0
 0.5
0.4
 0.5
0.2
 2.6
-0.2
 -0.6
-0.8
 0.7
0.6
28 LOC4326449 probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase 4326449 OSNPB_010103600 3.3 3.4
 3.2
 0.2
 2.6
 0.3
 1.2
0.6
 2.6
0.8
 1.4
0.3
 -0.4
 2.2
 -0.0
 0.2
 -1.0
 0.1
 0.1
 1.3
29 LOC4341199 uncharacterized LOC4341199 4341199 Os06g0530200 3.3 4.8
 1.8
 0.2
 3.6
 1.7
-0.9
 1.7
0.3
 2.5
2.0
 1.9
1.8
 2.0
 1.7
 -0.1
 0.7
 0.4
 0.7
 0.1
 1.1
30 LOC112938644 uncharacterized LOC112938644 112938644 Os04g0460350 3.3 4.5
1.5
 1.4
 1.5


1.4
 1.8


-0.4
 1.5
 1.1
31 LOC4328559 mediator of RNA polymerase II transcription subunit 11 4328559 Os02g0189100 3.2 4.4
 2.0
 0.3
 4.1
 0.6
 1.0
-0.7
 1.1
-0.1
 0.9
-0.8
 -0.2
 0.4
 -1.2
 0.8
 0.4
 2.6
-0.1
 0.1
-0.5
 1.0
0.7
32 LOC4334595 actin-depolymerizing factor 4-like 4334595 OSNPB_030820600 3.2 3.7
 2.8
 0.4
0.2
 3.8
1.3
 2.0
0.9
 2.7
2.1
 2.8
2.4
 2.2
1.7
 1.2
0.8
 3.7
2.0
 1.0
0.7
 2.6
1.8
 1.2
0.9
 2.4
0.9
 0.0
-0.3
 2.6
2.1
33 LOC4326797 GTP-binding protein SAR1A 4326797 Os01g0338000 3.2 3.0
 3.4
 0.0
-0.1
 4.8
3.5
 1.4
0.5
 4.4
3.5
 3.7
1.6
 4.3
2.9
 0.6
0.2
 2.9
2.3
 1.7
1.3
 2.9
2.1
 0.7
0.5
 2.0
1.8
 0.8
-0.6
 2.7
2.7
34 LOC4351851 probable aspartyl aminopeptidase 4351851 Os12g0236500 3.2 4.0
 2.4
 0.0
 2.5
 0.8
 1.3
0.3
 1.6
-0.2
 4.1
1.6
 1.0
 2.3
 -0.5
-1.1
 0.5
0.2
 0.6
-1.1
 1.3
 -0.9
 2.9
35 LOC4327087 60S ribosomal protein L11-like 4327087 Os01g0205500 3.2 4.1
 2.3
 0.5
0.2
 2.4
2.0
 0.6
0.6
 3.4
2.5
 2.6
2.5
 4.4
3.4
 1.0
0.7
 3.3
2.9
 0.2
0.1
 1.7
1.7
 -0.3
-0.4
 4.9
4.9
 1.0
0.5
 1.3
0.9
36 LOC4346249 acyl carrier protein 3, chloroplastic 4346249 Os08g0549300 3.2 1.7
 4.7
 1.2
0.6
 4.2
4.1
 4.8
1.5
 2.7
2.6
 2.2
2.0
 4.9
4.0
 1.3
0.7
 4.2
3.2
 1.5
0.6
 2.7
2.2
 0.8
0.2
 3.1
2.8
 0.3
0.2
 1.3
1.2
37 LOC4327162 ubiquitin-conjugating enzyme E2 5A-like 4327162 OSNPB_010658400 3.2 3.3
 3.1
 1.0
0.7
 6.1
4.8
 1.8
1.8
 3.5
3.3
 2.5
2.4
 2.7
2.3
 1.8
0.7
 2.7
1.6
 1.7
1.6
 2.7
1.9
 0.9
0.7
 1.5
1.2
 1.2
0.8
 3.1
2.8
38 LOC4339049 histone H4 4339049 Os05g0466600 3.2 3.7
 2.6
 0.8
-0.1
 2.1
1.9
 1.6
1.3
 1.4
0.6
 1.8
1.4
 2.0
1.4
 -0.2
-0.5
 2.8
2.6
 0.6
0.4
 3.1
2.7
 1.3
1.2
 2.8
2.1
 0.9
0.6
 1.0
1.0
39 LOC9268052 cytochrome b-c1 complex subunit 8 9268052 Os06g0177000 3.2 4.4
-0.1
-0.4
 3.8
3.2
 3.0
2.4
 3.3
3.0
 1.7
1.3
 3.4
2.7
 1.1
-0.3
 4.1
2.0
 0.6
0.5
 2.8
2.2
 0.5
0.0
 1.5
 0.5
 2.5
40 LOC4324384 calmodulin 4324384 OSNPB_010267900 3.2 3.6
 2.7
 0.3
0.0
 3.3
2.5
 2.4
2.4
 2.0
1.9
 4.3
3.8
 5.1
2.4
 1.2
0.5
 6.3
5.7
 0.7
0.7
 4.1
2.0
 2.0
1.0
 3.3
2.5
 0.8
0.1
 2.2
1.8
41 LOC4338222 protein kish 4338222 Os05g0251500 3.2 2.2
 4.1
 -0.2
 3.7
 2.3
 0.7
0.4
 0.7
0.5
 1.0
-0.3
 0.6
-0.5
 2.2
-0.5
 0.3
0.2
 0.4
-0.0
 -0.3
-0.5
 2.0
 0.9
 1.0
42 LOC4324987 uncharacterized LOC4324987 4324987 Os01g0908400 3.2 4.0
 2.3
 0.6
 2.9
 1.3
 1.9
1.2
 3.8
1.7
 3.3
1.5
 0.3
 3.8
 0.1
 0.5
 -0.5
 1.1
 -0.3
 1.9
43 LOC4345144 uncharacterized LOC4345144 4345144 Os08g0272000 3.2 3.6
 2.7
 -0.2
-0.7
 2.4
0.6
 0.7
-1.2
 2.3
1.7
 1.8
0.6
 2.2
1.9
 0.2
 1.4
 -0.0
 1.0
 0.4
 2.9
 -0.0
 0.9
44 LOC9270645 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A-like 9270645 Os07g0620600 3.2 4.1
0.7
-0.1
 4.0
-0.6
 -0.7
 0.3
-0.7
 0.0
-0.8
 0.0
-0.6
 0.0
-0.0
 1.0
-0.1
 0.7
 0.9
 -1.1
 0.1
 0.9
 -1.0
45 LOC4332532 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B 4332532 Os03g0295500 3.2 4.1
0.7
 2.4
 3.1
1.1
 1.8
1.7
 2.9
1.8
 4.1
3.1
 0.9
 4.6
 -0.0
 3.2
 0.4
 1.0
 -0.7
 2.3
46 LOC4351612 V-type proton ATPase 16 kDa proteolipid subunit-like 4351612 Os12g0168900 3.1 2.6
 3.6
 1.1
0.6
 2.9
2.6
 2.2
1.8
 1.9
1.5
 2.3
1.9
 2.4
2.1
 0.7
0.4
 4.0
3.7
 0.9
0.5
 2.1
1.9
 0.9
0.9
 2.1
0.6
 -0.0
-0.2
 2.7
2.0
47 LOC4340392 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic 4340392 Os06g0196600 3.1 2.1
 4.1
 0.4
-0.9
 1.5
0.6
 0.7
 1.4
1.4
 -0.1
-0.7
 0.3
0.2
 0.6
0.6
 2.1
1.1
 -0.2
-0.4
 0.9
0.6
 -0.2
-0.5
 3.1
2.1
 0.7
0.4
 -0.2
-0.4
48 LOC4341252 aspartate aminotransferase, mitochondrial 4341252 Os06g0548000 3.1 2.6
 3.6
 0.3
-0.7
 1.1
1.0
 0.5
 1.2
0.8
 2.2
0.2
 3.9
1.4
 0.8
 1.4
 0.2
-0.3
 1.2
-0.3
 1.4
-0.2
 -0.2
 -2.1
 0.0
49 LOC4334096 uncharacterized LOC4334096 4334096 Os03g0747300 3.1 3.9
 2.3
 -0.2
 4.2
 0.6
-0.3
 0.5
-0.1
 0.7
0.2
 -0.3
-1.0
 1.2
 2.9
 0.1
-0.3
 -0.5
-0.9
 0.3
-0.1
 0.8
 0.3
 0.5
50 LOC4352336 probable stress-associated endoplasmic reticulum protein 4352336 Os12g0514100

-0.1
 3.6
 0.4
0.1
 1.8
 2.0
 3.7
 1.1
 2.1
 1.0
-0.1
 1.8
-0.3
 0.0
-0.7
 1.3
 0.8
 1.0
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