Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4339347   probable peptidyl-tRNA hydrolase 2 
 osa-r.5   4339347   probable peptidyl-tRNA hydrolase 2 
 osa-m.8   4339347   probable peptidyl-tRNA hydrolase 2 
 ath-u.4   AT4G32900   Peptidyl-tRNA hydrolase II (PTH2) family protein 
 gma-u.4   121174779   probable peptidyl-tRNA hydrolase 2 
 gma-u.4   100527852   uncharacterized LOC100527852 
 sly-u.4   101252611   peptidyl-tRNA hydrolase 2, mitochondrial 
 ppo-u.4   7462298   peptidyl-tRNA hydrolase 2, mitochondrial 
 mtr-u.4   11425883   peptidyl-tRNA hydrolase 2, mitochondrial 

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Top 50 coexpressed genes to 4339347 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa902   Monoterpenoid biosynthesis  1 8 -
 osa3022   Basal transcription factors  1 47 -
 osa3008   Ribosome biogenesis in eukaryotes  1 90 -
 osa3015   mRNA surveillance pathway  1 115 -
 osa4016   MAPK signaling pathway - plant  1 158 -

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osa:LOC4339347 (probable peptidyl-tRNA hydrolase 2) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4339347
osa-r.5
for
4339347
osa-m.8
for
4339347
ath-u.4
for
AT4G32900
gma-u.4
for
121174779
gma-u.4
for
100527852
sly-u.4
for
101252611
ppo-u.4
for
7462298
mtr-u.4
for
11425883
1 LOC4341126 uncharacterized LOC4341126 4341126 Os06g0505400 4.5 4.3
 4.6
 0.7
 0.4
0.3
 2.4
1.4
 0.8
 0.7
-0.1
 3.4
0.6
2 LOC4348618 ribosomal RNA small subunit methyltransferase I 4348618 Os10g0414500 4.4 4.1
 4.7
 2.6
 1.4
 1.9
 1.4
 0.4
 2.1
3 LOC4339296 uncharacterized LOC4339296 4339296 Os05g0512500 4.4 3.2
 5.5
 -0.0
 -0.3
-0.7
 1.3
1.3
 2.8
 2.4
 1.1
4 LOC4331591 PHD finger protein ING1 4331591 Os03g0143600 4.4 3.4
 5.3
 2.9
 0.4
-0.2
 2.7
0.4
 0.4
 0.9
 0.8
5 LOC4342056 uncharacterized LOC4342056 4342056 Os06g0713900 4.3 4.9
 3.7
 0.7
 0.1
-0.6
 1.4
1.2
 0.7
0.5
 2.2
-1.5
 0.5
6 LOC4347220 uncharacterized LOC4347220 4347220 Os09g0450200 4.3 4.5
 4.0
 3.2
 0.6
-0.3
 3.4
2.0
 3.1
 3.2
 0.8
7 LOC4324040 tetratricopeptide repeat protein 5 4324040 Os01g0506200 4.2 3.2
 5.2
1.8
1.0
 0.8
0.7
 0.6
 0.3
 1.3
8 LOC4336281 G patch domain-containing protein 8 4336281 Os04g0496600 4.1 2.7
 5.4
 3.1
 -0.6
-1.0
 1.0
-0.1
 2.8
 0.9
0.3
 1.7
9 LOC4336596 O-fucosyltransferase 29 4336596 Os04g0551300 4.0 3.5
 4.5
 2.1
 1.2
-0.3
 0.0
0.0
 1.1
-0.4
 -0.1
-0.2
 0.2
-0.2
10 LOC4348989 uncharacterized LOC4348989 4348989 Os10g0493800 4.0 3.7
 4.4
 0.8
 -0.4
 0.8
 1.9
 1.5
-0.2
 2.1
1.6
11 LOC4352641 uncharacterized LOC4352641 4352641 Os12g0581700 4.0 4.4
 3.6
 -0.3
 -0.6
-1.0
 1.4
1.0
 0.0
 1.9
1.3
 1.7
12 LOC4328829 probable LRR receptor-like serine/threonine-protein kinase At5g45780 4328829 Os02g0236100 3.9 4.3
 3.5
 0.8
 -1.1
 0.3
 0.2
 -1.5
 0.3
13 LOC4331158 probable protein S-acyltransferase 15 4331158 Os02g0819100 3.9 3.2
 4.5
 -0.2
 0.4
0.1
 0.8
0.0
 1.2
 0.3
 1.2
14 LOC4342652 F-box protein CPR1 4342652 Os07g0196900 3.9 2.7
 5.0





15 LOC4323977 uncharacterized LOC4323977 4323977 3.8 2.6
 5.1





16 LOC4343287 putative casein kinase II subunit beta-4 4343287 Os07g0495100 3.8 4.3
 3.3
 1.4
-0.0
 -0.2
-0.6
 2.0
0.8
 0.8
0.7
 2.4
1.5
 -0.1
-0.4
17 LOC4331675 FH protein interacting protein FIP2 4331675 Os03g0157500 3.8 4.2
 3.3
 0.2
 -0.7
 1.7
 2.0
 0.1
-0.1
 1.7
18 LOC9267160 protein OSB1, mitochondrial 9267160 Os03g0611700 3.8 3.5
 4.0
 -0.2
 1.0
0.9
 4.0
2.7
 0.7
0.3
 2.0
0.6
 1.3
-0.1
19 LOC4327632 SUPPRESSOR OF ABI3-5 4327632 Os01g0170100 3.7 2.9
 4.6
 1.4
 0.1
 0.6
 1.3
 1.0
 1.7
20 LOC9272663 cyclin-C1-1-like 9272663 OSNPB_090504400 3.7 4.0
 3.4
 4.1
2.2
 -1.1
-1.8
 1.0
0.3
 2.5
 2.0
 0.0
21 LOC4349519 cyclin-dependent kinase E-1-like 4349519 OSNPB_100580300 3.7 3.3
 4.1
 0.6
 -1.6
-1.9
 0.1
-0.4
 0.6
 0.2
-2.0
 1.9
22 LOC4326374 serine/threonine-protein kinase AFC3 4326374 Os01g0590900 3.7 4.1
 3.3
 2.9
 -0.8
-1.4
 -0.1
-0.9
0.4
 2.7
23 LOC4330909 protein FIP1 4330909 Os02g0778300 3.7 4.0
 3.4
 1.7
0.8
 -0.3
-0.6
 1.9
1.2
 1.0
 1.8
1.5
 1.8
24 LOC4336887 uncharacterized LOC4336887 4336887 Os04g0602300 3.7 2.3
 5.0
 0.9
 0.8
0.6
 2.0
1.7
 0.7
 0.8
 1.4
25 LOC4341065 protein SAWADEE HOMEODOMAIN HOMOLOG 2 4341065 Os06g0485100 3.6 2.5
 4.8
 1.1
 0.2
-1.1
 2.4
1.5
 1.0
 1.6
1.0
 1.9
26 LOC4328600 non-structural maintenance of chromosomes element 4 homolog A 4328600 Os02g0194300 3.6 2.5
 4.6
 0.2
-0.4
 -0.7
-1.1
 1.5
1.4
 0.1
 0.4
0.3
 0.5
27 LOC4336811 uncharacterized LOC4336811 4336811 Os04g0589200 3.6 2.2
 4.9
 2.3

1.9
 1.7
28 LOC4343770 protein ANTHESIS POMOTING FACTOR 1 4343770 Os07g0589400 3.6 2.5
 4.6
 0.7
 0.3
-1.4
 0.7
0.2
 -0.0
 1.8
 1.7
29 LOC4349313 mediator of RNA polymerase II transcription subunit 12 4349313 Os10g0550100 3.6 3.0
 4.1
 -0.0
 1.5
1.2
 2.1
1.3
 -1.2
 -1.1
-1.3
 -0.7
-1.4
30 LOC4352433 uncharacterized LOC4352433 4352433 Os12g0540700 3.6 4.6
 2.5
 1.7
 -0.5
-0.9
 0.2
0.2
 1.7
 1.2
 0.6
31 LOC4329193 ADP-ribosylation factor-like protein 2 4329193 Os02g0327100 3.5 2.1
 5.0
 -0.2
 0.0
 0.6
 1.9
 1.3
 0.8
32 LOC4340824 serine/threonine-protein phosphatase 4 regulatory subunit 2 4340824 Os06g0300700 3.5 2.9
 4.2
 3.3
 -0.9
-0.9
 1.4
1.3
 2.4
 2.5
 2.2
33 LOC4334443 protein RTE1-HOMOLOG 4334443 Os03g0799500 3.5 3.2
 3.8
 0.0
 0.1
-1.0
 0.9
-0.3
 -0.0
 0.6
 1.0
34 LOC4330282 uncharacterized LOC4330282 4330282 Os02g0672400 3.5 3.5
 3.5
 1.0
 -0.3
 2.2
 3.7
 1.9
 -0.4
35 LOC4337652 transcription factor IIIA 4337652 Os05g0121400 3.5 3.7
 3.3
 1.5
 0.3
0.1
 1.3
-0.4
 2.1
 1.1
-0.2
 -0.3
-0.5
36 LOC4333543 kxDL motif-containing protein 1 4333543 Os03g0640400 3.5 3.2
 3.7
 1.3
 -0.7
 1.7
 1.9
 1.4
 1.8
37 LOC4328575 biogenesis of lysosome-related organelles complex 1 subunit 2 4328575 Os02g0190900 3.5 3.4
 3.6
 -0.0
 -0.7
-1.0
 1.7
0.3
 0.8
 0.6
 -1.4
38 LOC9268562 uncharacterized LOC9268562 9268562 Os02g0580800 3.5 4.2
 2.7
 2.2
1.4
 -1.7
-2.8
 -0.5
-0.9
 1.3
0.1
 1.3
0.9
 1.4
0.9
39 LOC4336492 short-chain dehydrogenase/reductase 2b 4336492 Os04g0531700 3.5 4.0
 3.0
 0.0
-0.5
 0.7
0.7
 0.4
-0.0
 1.5
1.1
 0.2
0.1
 1.1
0.4
40 LOC4338489 transcription initiation factor TFIID subunit 7 4338489 Os05g0347000 3.5 3.2
 3.7
 1.4
 0.6
-0.8
 1.6
1.6
 0.9
 2.2
1.9
 0.8
41 LOC4343995 defective in cullin neddylation protein 1 4343995 Os07g0631000 3.5 4.1
 2.8
 1.2
 -0.5
-0.7
 0.6
-1.2
 1.1
 1.3
0.7
 2.2
42 LOC4337473 serine/threonine-protein kinase ATG1t 4337473 Os04g0686600 3.4 2.0
 4.9
 1.7
 1.8
0.2
 0.0
-0.4
 0.1
 1.0
0.6
 0.7
43 LOC4329605 WD repeat domain-containing protein 83 4329605 Os02g0543400 3.4 3.9
 3.0
 2.7
 -0.2
-0.9
 1.0
-0.3
 0.9
 -0.2
 1.3
44 LOC4336214 trihelix transcription factor GT-4 4336214 Os04g0486400 3.4 2.8
 4.0
 -1.5
 1.2
0.7
 0.4
-0.4
 1.9
 0.4
-0.9
 0.3
45 LOC4347515 TITAN-like protein 4347515 Os09g0506900 3.4 2.8
 4.1
 3.6
 -0.1
 -2.0
 0.4
 1.6
-0.2
 1.6
1.4
46 LOC4337328 ubiquitin carboxyl-terminal hydrolase 3 4337328 Os04g0667500 3.4 2.5
 4.3





47 LOC4332327 eukaryotic translation initiation factor NCBP-like 4332327 OSNPB_030262400 3.4 4.0
 2.8
 0.4
 -0.1
-1.6
 1.1
0.3
 0.6
 1.6
 1.8
48 LOC4337067 uncharacterized LOC4337067 4337067 Os04g0626100 3.4 2.8
 4.0





49 LOC4334723 uncharacterized LOC4334723 4334723 Os03g0839300 3.3 3.9
 2.8





50 LOC4337299 repressor of RNA polymerase III transcription MAF1 homolog 4337299 Os04g0662900







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