Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4339652   uncharacterized LOC4339652 
 osa-r.5   4339652   uncharacterized LOC4339652 
 osa-m.8   4339652   uncharacterized LOC4339652 
 ath-u.4   AT5G52960   tRNA dimethylallyltransferase 
 gma-u.4   100801986   uncharacterized LOC100801986 
 gma-u.4   100814763   uncharacterized LOC100814763 
 sly-u.4   101256845   uncharacterized LOC101256845 
 ppo-u.4   7489800   uncharacterized LOC7489800 
 mtr-u.4   25496022   uncharacterized LOC25496022 

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Top 50 coexpressed genes to 4339652 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  9 336 7.51
 osa860   Porphyrin metabolism  5 42 7.57
 osa970   Aminoacyl-tRNA biosynthesis  3 70 3.36
 osa280   Valine, leucine and isoleucine degradation  1 46 -
 osa1240   Biosynthesis of cofactors  3 248 -

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osa:LOC4339652 (uncharacterized LOC4339652) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4339652
osa-r.5
for
4339652
osa-m.8
for
4339652
ath-u.4
for
AT5G52960
gma-u.4
for
100801986
gma-u.4
for
100814763
sly-u.4
for
101256845
ppo-u.4
for
7489800
mtr-u.4
for
25496022
1 LOC4346032 transcription termination factor MTERF6, chloroplastic/mitochondrial 4346032 Os08g0515800 4.9 4.2
 5.6
 5.2
 2.4
2.1
 3.7
2.6
 3.3
 1.2
 1.1
2 LOC4332375 tropinone reductase homolog At5g06060 4332375 Os03g0268900 4.8 5.3
 4.2
 1.3
0.9
 2.9
1.9
 2.4
2.3
 2.0
1.8
 2.0
1.6
 3.5
1.6
3 LOC4342775 amino acid transporter ANT1 4342775 Os07g0231400 4.5 4.8
 4.2
 0.2
 -0.9
-0.9
 -0.1
-1.8
0.8
 0.1
4 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 4.3 4.0
 4.6
 4.1
1.5
 6.7
 7.7
 8.0
3.0
 3.1
2.7
 2.9
5 LOC4330763 50S ribosomal protein L29, chloroplastic 4330763 Os02g0754300 4.2 5.3
 3.2
 8.3
 3.2
2.7
 4.8
3.7
 5.3
3.5
 2.3
0.8
 3.2
6 LOC4347271 protein disulfide-isomerase SCO2 4347271 Os09g0458400 4.2 3.6
 4.8
 1.2
 2.2
 0.4
 2.3
 2.0
 0.7
7 LOC4341957 macrophage migration inhibitory factor homolog 4341957 Os06g0699500 4.1 4.7
 3.4
 5.3
 2.2
 2.1
 2.8
 1.4
 1.6
0.0
8 LOC4346041 EEF1A lysine methyltransferase 4 4346041 Os08g0517600 4.1 3.3
 4.9
 0.2
 -0.1
-0.2
 -0.2
-0.6
-0.7
 0.9
9 LOC4333591 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial-like 4333591 OSNPB_030651000 4.0 3.1
 5.0
 4.9
 1.8
1.2
 1.4
1.3
 3.7
 1.4
 2.8
10 LOC4330847 uncharacterized LOC4330847 4330847 Os02g0767900 4.0 3.8
 4.2
 4.4
 2.3
1.7
 3.5
1.9
 5.0
 2.2
 1.8
11 LOC4342508 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial 4342508 Os07g0170100 3.9 3.6
 4.2
 1.3
1.2
 -0.4
-0.9
 -1.3
-1.3
 -1.2
 -0.2
 -0.2
12 LOC4344600 plant cysteine oxidase 3 4344600 Os08g0133000 3.9 3.2
 4.5
 1.1
 2.4
0.6
 1.8
0.1
 -0.0
 0.9
0.1
 1.3
13 LOC4326593 50S ribosomal protein L31 4326593 Os01g0633000 3.8 4.1
 3.6
 5.7
 2.9
2.8
 3.1
3.0
 2.9
 1.9
 4.5
14 LOC4331535 glutathione S-transferase F11 4331535 Os03g0135300 3.8 4.6
 3.0
 -1.0
-1.2
 1.5
0.2
 1.1
0.9
 3.5
0.9
 2.2
0.5
 1.3
0.6
15 LOC4328118 glutamate--tRNA ligase, chloroplastic/mitochondrial 4328118 Os02g0121000 3.8 3.6
 3.9
 2.9
 3.6
3.2
 3.8
2.9
 0.8
 0.9
 1.2
16 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 3.8 3.2
 4.4
 2.2
 2.1
-0.1
 2.4
0.1
 2.3
 2.6
 0.2
17 LOC4348936 probable N-succinyldiaminopimelate aminotransferase DapC 4348936 Os10g0484700 3.8 3.6
 3.9
1.1
 3.4
1.8
 1.5
18 LOC4328139 NADP-dependent D-sorbitol-6-phosphate dehydrogenase 4328139 Os02g0123500 3.7 3.7
 3.8
 0.9
-0.4
 0.3
 2.4
 2.1
 2.0
 2.2
19 LOC4344415 B3 domain-containing protein IDEF1-like 4344415 OSNPB_080101000 3.7 4.2
 3.2





20 LOC4341126 uncharacterized LOC4341126 4341126 Os06g0505400 3.7 2.7
 4.6
 1.5
 1.5
1.3
 0.8
-0.2
 1.5
 0.4
0.3
 0.1
-0.3
21 LOC4325462 uncharacterized protein At2g39795, mitochondrial 4325462 Os01g0143800 3.7 3.0
 4.3





22 LOC4339667 uncharacterized LOC4339667 4339667 Os05g0571400 3.6 2.7
 4.6
 5.4
 3.9
 4.5
 3.2
 0.8
 -0.1
23 LOC4349426 10 kDa chaperonin 1, chloroplastic 4349426 Os10g0566700 3.6 4.0
 3.2
 5.9
4.5
 1.8
1.0
 2.5
2.3
 2.8
 1.7
0.5
 5.5
24 LOC4339637 cold-regulated 413 inner membrane protein 1, chloroplastic 4339637 Os05g0566800 3.6 3.9
 3.2
 0.0
-0.6
 0.7
 1.5
 -0.9
 1.1
 0.3
25 LOC4336271 uncharacterized LOC4336271 4336271 Os04g0495300 3.6 3.5
 3.6
 1.7
 2.6
 2.8
 -0.0
 1.9
 -1.2
26 LOC4346927 protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic 4346927 Os09g0380200 3.5 3.3
 3.7
 6.1
 4.1
3.5
 4.5
2.8
 4.2
 2.1
 1.0
27 LOC4327918 protoporphyrinogen oxidase, chloroplastic-like 4327918 OSNPB_010286600 3.5 4.3
 2.7
 3.5
 4.9
 7.0
 1.7
 2.8
0.5
 0.5
28 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 3.5 3.8
 3.2
 4.2
 4.3
 7.1
 3.8
1.9
 4.7
3.8
 1.8
29 LOC4334651 50S ribosomal protein L18, chloroplastic-like 4334651 OSNPB_030828100 3.5 3.7
 3.3
 5.5
 4.9
 7.3
 3.8
 2.5
1.8
 3.8
30 LOC4346000 3-oxoacyl-[acyl-carrier-protein] reductase FabG 4346000 Os08g0510400 3.5 2.4
 4.5
 -0.3
-1.0
 1.3
0.7
 0.5
0.4
 0.8
0.6
 0.8
 0.6
0.1
31 LOC4326635 uroporphyrinogen decarboxylase 1, chloroplastic-like 4326635 OSNPB_010622300 3.4 3.4
 3.5
 5.1
 3.3
2.8
 3.2
2.8
 3.6
 1.2
 3.5
32 LOC4330458 probable pinoresinol-lariciresinol reductase 3 4330458 Os02g0705000 3.4 2.4
 4.5
 0.8

2.4
 -0.1
33 LOC4331459 50S ribosomal protein L5, chloroplastic-like 4331459 OSNPB_030125000 3.4 3.1
 3.8
 4.8
 3.4
1.8
 4.0
2.6
 3.9
 2.1
1.9
 2.8
34 LOC4346010 plant intracellular Ras-group-related LRR protein 4-like 4346010 OSNPB_080511700 3.4 3.8
 3.0
 1.8
0.9
 0.2
-0.5
 -0.3
-0.7
 1.5
0.5
 -0.5
-1.5
 -0.9
35 LOC4335424 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 4335424 Os04g0303900 3.4 2.6
 4.2
 4.2
 4.9
3.0
 4.4
3.6
 4.9
 2.4
 2.7
36 LOC4348519 red chlorophyll catabolite reductase 4348519 Os10g0389200 3.4 2.9
 3.9
 0.9
 3.2
 4.9
 1.7
 1.4
0.9
 1.7
37 LOC4334100 photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 4334100 Os03g0747700 3.4 2.9
 3.9
 5.2
 0.5
-0.3
 1.1
0.1
 2.8
 1.0
 0.7
38 LOC4336881 uncharacterized LOC4336881 4336881 Os04g0601400 3.4 3.7
 3.1
 0.9
 -0.0
-0.4
 -0.3
-0.6
 0.9
 -0.3
 0.6
39 LOC107275773 uncharacterized LOC107275773 107275773 Os11g0466300 3.4 4.5
-0.6
 -1.4
 -1.4
 0.5
-2.3
40 LOC4347733 uncharacterized LOC4347733 4347733 Os09g0541700 3.4 3.5
 3.3
 1.7
 3.7
 5.7
 4.1
 2.4
 2.6
41 LOC4343250 asparagine--tRNA ligase, chloroplastic/mitochondrial 4343250 Os07g0485400 3.4 3.7
 3.1
 1.4
 1.5
1.0
 1.4
0.3
 2.8
 3.2
2.0
 0.6
42 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 3.4 3.6
 3.2
 7.7
 3.7
2.9
 4.5
4.4
 4.2
 2.3
 1.3
43 LOC4341664 50S ribosomal protein L35, chloroplastic 4341664 Os06g0647100 3.4 3.2
 3.5
 5.6
 5.3
4.6
 5.9
5.7
 4.5
 3.0
 4.2
44 LOC4337135 uncharacterized LOC4337135 4337135 Os04g0635700 3.4 2.6
 4.2
 2.1
 2.0
1.1
 2.3
1.8
 1.4
 1.0
0.3
 0.4
45 LOC4333313 uncharacterized LOC4333313 4333313 Os03g0578200 3.3 2.2
 4.5
 3.6
 3.9
1.6
 3.2
0.3
 4.5
 2.7
 2.1
46 LOC4333604 chlorophyll(ide) b reductase NOL, chloroplastic-like 4333604 OSNPB_030654600 3.3 3.0
 3.7
 2.1
 3.0
 3.4
 2.9
 1.2
 -0.2
47 LOC4347161 20 kDa chaperonin, chloroplastic 4347161 Os09g0438700 3.3 4.1
 2.5
 4.0
 2.4
2.2
 3.3
3.1
 3.6
2.1
 0.7
0.6
 4.4
4.4
48 LOC4332089 50S ribosomal protein L15, chloroplastic 4332089 Os03g0219900 3.3 3.7
 2.8
 4.0
 5.0
 5.2
 4.8
 2.6
0.4
 2.7
49 LOC4339653 common plant regulatory factor 1 4339653 Os05g0569300 3.3 3.0
 3.6
 0.7
-0.8
 -0.4
-0.5
 0.7
0.2
 0.4
-1.1
 0.4
-0.1
 -0.8
-1.0
50 LOC4337506 30S ribosomal protein S17, chloroplastic-like 4337506 Os04g0691600 3.3 3.1
 3.4
5.8
5.2
 5.9
5.1
 2.9
 3.2
 2.0
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