Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4339932   multiple organellar RNA editing factor 2, chloroplastic 
 osa-r.5   4339932   multiple organellar RNA editing factor 2, chloroplastic 
 osa-m.8   4339932   multiple organellar RNA editing factor 2, chloroplastic 
 osa-u.4   WSP1   white stripe leaf/panicle1 
 ath-u.4   MORF6   plastid developmental protein DAG 
 ath-u.4   AT1G32580   plastid developmental protein DAG 
 gma-u.4   100795099   multiple organellar RNA editing factor 2, chloroplastic 
 gma-u.4   100306054   multiple organellar RNA editing factor 6-like 
 sly-u.4   101252285   multiple organellar RNA editing factor 2, chloroplastic 
 sly-u.4   101264429   multiple organellar RNA editing factor 2, chloroplastic 
 ppo-u.4   7473469   multiple organellar RNA editing factor 2, chloroplastic 
 ppo-u.4   7459979   multiple organellar RNA editing factor 2, chloroplastic 
 mtr-u.4   25482991   multiple organellar RNA editing factor 2, chloroplastic 

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Top 50 coexpressed genes to 4339932 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  32 336 46.67
 osa3008   Ribosome biogenesis in eukaryotes  3 86 3.10
 osa4120   Ubiquitin mediated proteolysis  1 149 -
 osa4626   Plant-pathogen interaction  1 218 -

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osa:LOC4339932 (multiple organellar RNA editing factor 2, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4339932
osa-r.5
for
4339932
osa-m.8
for
4339932
osa-u.4
for
WSP1
ath-u.4
for
MORF6
ath-u.4
for
AT1G32580
gma-u.4
for
100795099
gma-u.4
for
100306054
sly-u.4
for
101252285
sly-u.4
for
101264429
ppo-u.4
for
7473469
ppo-u.4
for
7459979
mtr-u.4
for
25482991
1 LOC4338033 probable tRNA N6-adenosine threonylcarbamoyltransferase 4338033 Os05g0194600 9.6 8.7
 10.4
 1.1
 2.3
 1.7
 5.7
3.6
 2.7
1.6
 5.0
 1.8
 1.5
 2.8
 0.9
2 LOC4327104 50S ribosomal protein L3-2, chloroplastic 4327104 Os01g0251100 9.5 8.0
 11.0
 0.9
 6.6
 5.3
 3.5
3.0
 -0.4
-0.9
 2.0
 -1.2
 3.0
2.3
 2.4
2.1
 1.4
0.6
3 LOC4340741 H/ACA ribonucleoprotein complex subunit 2-like protein 4340741 Os06g0274200 9.4 9.5
 9.2
 1.3
1.0
 1.2
 2.6
 2.5
1.3
 0.4
0.2
 6.3
 2.7
 3.1
 1.7
 0.9
4 LOC4344241 60S ribosome subunit biogenesis protein NIP7 homolog 4344241 Os07g0670600 8.4 5.9
 10.9
 0.1
 5.4
 4.3
 5.4
4.9
 2.3
2.1
 5.5
 1.8
 0.7
 0.9
 1.9
5 LOC4331875 protein EMBRYO DEFECTIVE 514 4331875 Os03g0187000 8.2 8.1
 8.4
 1.2
 3.0
 1.5
 4.2
3.6
 2.8
2.0
 5.7
1.3
 2.5
0.5
 2.6
1.8
 2.0
1.4
 1.7
1.5
6 LOC4342771 40S ribosomal protein S12 4342771 Os07g0229900 7.9 7.0
 8.9
 1.5
0.5
 4.0
2.6
 2.2
1.1
 1.7
1.6
 2.0
-0.4
 2.9
2.2
 2.0
1.3
 3.2
2.4
 3.0
2.2
 1.0
0.8
7 LOC4329381 40S ribosomal protein S8-like 4329381 OSNPB_020489400 7.9 6.6
 9.2
 1.6
0.6
 4.9
0.8
 2.0
0.4
 4.9
3.3
 3.3
2.1
 5.3
4.8
 2.9
1.4
 3.5
3.5
 2.7
2.5
 0.9
0.5
8 LOC4329366 uncharacterized LOC4329366 4329366 Os02g0481000 7.8 6.9
 8.7
 1.3
 1.5
0.8
 2.5
2.0
 2.1
1.5
 1.2
1.2
 4.3
 1.5
 1.9
1.7
 2.7
2.0
 -0.0
9 LOC4342580 40S ribosomal protein S15-like 4342580 7.8 7.0
 8.6
 1.3
0.8
 3.9
3.5
 3.9
2.0
 2.3
2.2
 2.0
1.2
 2.4
2.0
 1.3
1.0
 3.1
2.9
 2.9
2.8
 1.1
0.8
10 LOC4340027 40S ribosomal protein S20-like 4340027 OSNPB_060134000 7.8 6.9
 8.6
 1.3
1.2
 3.7
3.5
 3.3
2.9
 3.0
3.0
 2.8
1.7
 4.2
3.5
 1.1
0.2
 2.8
1.9
 2.1
0.6
 1.0
0.2
11 LOC4346314 40S ribosomal protein S25-2 4346314 Os08g0559200 7.7 6.4
 9.1
 0.6
0.4
 3.7
3.3
 3.2
2.4
 2.8
2.4
 2.3
2.0
 3.7
3.7
 2.4
2.0
 2.8
2.5
 3.4
2.8
 0.9
0.6
12 LOC4324030 uncharacterized LOC4324030 4324030 Os01g0511200 7.7 5.1
 10.2
 1.3
 5.0
2.5
 4.0
1.7
 4.1
3.6
 3.7
0.6
 5.8
 2.6
 2.9
 1.4
 2.0
1.0
13 LOC4336856 60S ribosomal protein L12 4336856 Os04g0598200 7.7 6.1
 9.2
 1.0
0.7
 4.3
3.4
 2.9
2.5
 4.9
3.8
 3.5
2.3
 3.3
2.5
 1.5
0.8
 2.8
2.5
 3.3
3.1
 1.7
1.3
14 LOC4332793 60S ribosomal protein L18-3 4332793 Os03g0341100 7.6 7.0
 8.1
 0.9
0.7
 4.8
3.8
 3.0
2.6
 3.3
2.9
 1.9
1.5
 3.2
1.9
 0.7
0.6
 3.1
3.0
 1.9
1.8
 0.8
0.6
15 LOC4334676 huntingtin-interacting protein K 4334676 Os03g0832300 7.6 7.9
 7.2
 1.0
 2.1
 0.8
 2.1
1.6
 2.0
1.0
 3.2
 0.7
 1.9
 1.5
 1.9
16 LOC4329757 NAP1-related protein 2-like 4329757 OSNPB_020576700 7.5 7.6
 7.4
 0.9
 5.3
4.5
 7.8
6.1
 2.4
1.9
 -0.1
-1.3
 7.0
5.8
 3.0
2.6
 3.0
2.2
 2.0
0.1
 1.6
0.4
17 LOC4341310 T-complex protein 1 subunit epsilon 4341310 Os06g0562600 7.3 6.4
 8.3
 0.9
 2.1
 1.3
 2.7
2.5
 0.8
0.4
 6.3
 2.0
 2.3
2.1
 1.1
0.4
 1.3
18 LOC4336140 60S ribosomal protein L6-3 4336140 Os04g0473400 7.3 5.9
 8.7
 0.6
0.5
 5.1
2.8
 3.9
3.6
 4.1
3.9
 3.0
2.2
 3.4
3.1
 1.2
1.0
 3.1
2.9
 3.1
2.1
 1.2
0.7
19 LOC4348839 60S ribosomal protein L21-2 4348839 Os10g0465800 7.3 7.4
 7.2
 0.6
0.3
 4.3
3.6
 2.6
1.9
 3.7
2.1
 3.3
3.3
 2.5
1.2
 1.6
-0.6
 4.0
3.6
 2.9
2.6
 0.9
0.7
20 LOC4347422 60S ribosomal protein L9-like 4347422 OSNPB_090485900 7.2 6.6
 7.8
 0.8
0.2
 4.2
3.9
 3.6
3.5
 3.3
3.2
 3.5
1.1
 4.2
3.2
 1.6
1.1
 3.2
3.2
 2.5
2.1
 1.2
-0.3
21 LOC4325458 uncharacterized protein At2g39795, mitochondrial 4325458 Os01g0143300 7.1 7.2
 7.1
 0.0
 5.9
4.5
 5.4
4.7
 4.5
4.5
 0.9
0.9
 8.9
 2.6
 3.4
3.3
 2.0
1.6
 1.9
1.7
22 LOC4335865 40S ribosomal protein S10-1-like 4335865 OSNPB_040430100 7.1 6.1
 8.2
 1.1
0.4
 4.6
4.4
 3.4
1.9

4.6
1.6
 0.6
-0.2
 3.2
2.4
 4.0
2.6
 0.7
0.3
23 LOC4328016 40S ribosomal protein S4-like 4328016 OSNPB_020105900 7.1 6.1
 8.1
 1.1
0.9
 4.5
4.2
 4.9
3.6
 3.3
2.6
 3.0
2.4
 5.2
3.7
 1.5
1.2
 3.7
2.9
 3.1
2.3
 1.5
1.1
24 LOC4338485 40S ribosomal protein S7-like 4338485 OSNPB_050346300 7.1 6.5
 7.7
 1.6
1.1
 2.8
2.5
 2.8
2.5
 3.2
1.8
 3.5
2.2
 4.7
2.0
 1.3
0.3
 2.6
2.1
 2.3
2.0
 0.2
-0.0
25 LOC4333387 60S ribosomal protein L15 4333387 Os03g0598800 7.1 7.1
 7.1
 1.1
0.2
 5.8
4.4
 2.8
2.7
 3.5
2.6
 2.4
1.9
 4.6
3.9
 1.6
1.4
 3.2
3.0
 3.0
2.9
 1.7
1.0
26 LOC4339162 60S ribosomal protein L30 4339162 Os05g0490100 7.1 5.0
 9.1
 0.9
0.9
 2.7
2.6
 2.0
1.6
 1.8
1.7
 1.7
0.3
 2.2
1.9
 0.3
0.0
 2.0
1.5
 1.4
1.0
 0.2
-0.4
27 LOC4338564 uncharacterized LOC4338564 4338564 Os05g0367100 7.1 5.0
 9.1
 0.8
 7.3
 6.5
 4.2
1.0
 4.4
0.2
 7.8
 3.0
 3.0
 2.6
 0.6
28 LOC4352583 mitochondrial import inner membrane translocase subunit Tim9-like 4352583 OSNPB_120571200 7.1 6.2
 7.9
 0.8
 2.8
 1.6
 1.5
0.7
 -1.0
-1.3
 5.0
 1.1
 2.1
 0.7
 0.0
-0.8
29 LOC4330963 eukaryotic translation initiation factor 3 subunit G 4330963 Os02g0788400 7.1 6.1
 8.0
 0.3
 3.6
 1.3
 3.7
3.1
 3.6
2.7
 3.4
 0.1
 3.2
2.3
 1.1
0.7
 1.0
0.7
30 LOC4332851 nucleolar protein 56 4332851 Os03g0352300 7.0 6.6
 7.5
 0.3
-0.2
 3.3
1.2
 3.0
1.3
 4.9
3.9
 1.7
1.3
 4.8
 2.3
 2.8
2.4
 1.6
0.5
 1.3
31 LOC4334438 40S ribosomal protein S15-like 4334438 Os03g0798600 7.0 5.3
 8.8
 1.3
0.8
 3.9
3.5
 3.9
2.0
 2.3
2.2
 2.0
1.2
 2.4
2.0
 1.3
1.0
 3.1
2.9
 2.9
2.8
 1.1
0.8
32 LOC4329034 60S ribosomal protein L27-3 4329034 Os02g0284600 7.0 7.0
 7.0
 1.0
0.8
 4.1
3.3
 2.4
1.8
 4.1
2.8
 2.3
2.2
 4.6
4.2
 2.3
1.6
 2.9
2.6
 2.4
1.7
 1.2
0.5
33 LOC9271934 60S ribosomal protein L5-2-like 9271934 OSNPB_010896700 7.0 6.4
 7.6
 0.9
0.6
 4.0
3.8
 3.4
2.8
 2.5
1.6
 1.2
0.9
 2.6
2.3
 1.9
0.7
 3.2
2.6
 1.7
1.0
 1.1
0.2
34 LOC4334800 elongation factor Tu, mitochondrial 4334800 Os03g0851100 6.9 6.8
 7.0
 0.6
 5.3
 4.0
 5.3
3.6
 2.4
0.7
 8.2
7.2
 3.4
1.6
 4.0
2.5
 2.1
2.1
 1.6
35 LOC4344865 nucleolin 1-like 4344865 OSNPB_080192900 6.9 6.9
 6.9
 0.3
0.3
 4.1
0.6
 3.1
1.0
 4.0
3.4
 0.5
-0.2
 5.8
 1.7
 2.9
2.2
 1.0
0.2
 2.1
36 LOC4349409 60S ribosomal protein L27-3 4349409 Os10g0564300 6.9 7.3
 6.5
 1.0
0.8
 4.1
3.3
 2.4
1.8
 4.1
2.8
 2.3
2.2
 4.6
4.2
 2.3
1.6
 2.9
2.6
 2.4
1.7
 1.2
0.5
37 LOC4330533 60S ribosomal protein L31 4330533 6.9 7.3
 6.4
 1.4
0.4
 3.8
3.8
 4.9
1.6
 2.7
2.6
 2.4
2.2
 3.3
1.6
 1.4
0.3
 2.4
2.3
 0.9
0.7
 0.2
-0.1
38 LOC4332802 60S ribosomal protein L22-2 4332802 Os03g0343500 6.9 5.2
 8.6
 1.1
0.6
 2.9
2.5
 1.8
1.4
 3.2
2.7
 2.8
1.8
 2.8
1.7
 1.3
1.1
 2.9
2.6
 2.4
1.9
 1.3
1.3
39 LOC4331181 mediator of RNA polymerase II transcription subunit 36a 4331181 Os02g0821800 6.8 6.4
 7.2
 1.1
0.5
 6.5
3.2
 5.2
1.2
 3.5
2.8
 0.7
0.6
 7.3
 1.6
 3.0
3.0
 2.0
0.9
 1.1
0.7
40 LOC4339923 60S ribosomal protein L13-1 4339923 Os06g0115500 6.8 7.8
 5.8
 1.4
0.6
 4.4
3.9
 3.8
3.3
 3.0
3.0
 3.6
2.3
 5.1
3.1
 1.2
0.7
 3.3
2.5
 2.4
2.0
 1.2
1.2
41 LOC4350976 40S ribosomal protein S29 4350976 Os11g0634500 6.8 6.1
 7.5
 0.8
0.3
 2.7
2.2
 2.1
1.4
 1.5
0.9
 1.3
-0.1
 2.2
1.8
 0.5
0.2
 2.3
2.0
 1.5
1.3
 0.7
0.6
42 LOC4332169 ubiquitin-60S ribosomal protein L40-2-like 4332169 OSNPB_030234200 6.8 7.6
 6.0
 0.8
0.1
 4.3
3.6
 2.6
1.6
 3.0
3.0
 1.5
1.4
 4.9
3.5
 2.0
1.2
 2.6
1.1
 1.4
0.3
 1.4
0.0
43 LOC4329831 60S ribosomal protein L6-3 4329831 Os02g0591700 6.8 5.8
 7.7
 0.6
0.5
 5.1
2.8
 3.9
3.6
 4.1
3.9
 3.0
2.2
 3.4
3.1
 1.2
1.0
 3.1
2.9
 3.1
2.1
 1.2
0.7
44 LOC4324671 40S ribosomal protein S24-1 4324671 Os01g0723200 6.8 5.4
 8.2
 1.6
0.8
 2.2
1.9
 3.4
3.0
 3.7
2.3
 1.5
1.3
 3.1
2.4
 1.7
1.7
 2.8
2.6
 1.8
1.5
 0.7
45 LOC4348607 40S ribosomal protein S28 4348607 Os10g0411700 6.8 6.6
 7.0
 0.9
0.3
 2.7
2.6
 2.6
1.8
 1.9
1.4
 1.8
0.7
 3.1
1.7
 1.1
0.3
 2.6
1.4
 2.4
0.3
 0.5
0.4
46 LOC4327004 60S ribosomal protein L18a-like 4327004 OSNPB_010752300 6.8 6.3
 7.2
 0.7
0.2
 4.6
2.9
 3.8
3.5
 2.8
2.8
 2.0
0.6
 5.0
4.7
 2.5
2.4
 2.7
2.5
 2.5
2.1
 1.1
0.3
47 LOC4342672 uncharacterized LOC4342672 4342672 Os07g0202900 6.8 5.4
 8.1
 1.4
 5.9
 3.6
 4.5
3.0
 0.1
0.1
 4.7
 2.0
 1.2
 0.5
 0.2
48 LOC4344524 40S ribosomal protein S13-2-like 4344524 OSNPB_080117300 6.7 6.0
 7.4
 0.9
0.4
 4.8
3.5
 3.6
1.3
 2.1
2.1
 1.8
1.5
 3.6
3.3
 1.5
0.7
 2.2
1.9
 2.3
2.3
 0.2
0.1
49 LOC4342408 40S ribosomal protein S12 4342408 Os07g0150200 6.7 4.8
 8.6
 1.5
0.5
 4.0
2.6
 2.2
1.1
 1.7
1.6
 2.0
-0.4
 2.9
2.2
 2.0
1.3
 3.2
2.4
 3.0
2.2
 1.0
0.8
50 LOC4344261 60S ribosomal protein L22-2 4344261 Os07g0674200 6.7 5.5
 7.9
 1.1
0.6
 2.9
2.5
 1.8
1.4
 3.2
2.7
 2.8
1.8
 2.8
1.7
 1.3
1.1
 2.9
2.6
 2.4
1.9
 1.3
1.3
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