Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4340540   transcription termination factor MTEF1, chloroplastic 
 osa-r.5   4340540   transcription termination factor MTEF1, chloroplastic 
 osa-m.8   4340540   transcription termination factor MTEF1, chloroplastic 
 osa-u.4   9266609   uncharacterized LOC9266609 
 osa-u.4   9267605   uncharacterized LOC9267605 
 osa-u.4   4330735   transcription termination factor MTERF8, chloroplastic 
 sly-u.4   104647140   transcription termination factor MTERF5, chloroplastic-like 
 sly-u.4   104647052   transcription termination factor MTEF1, chloroplastic-like 
 sly-u.4   101268097   uncharacterized LOC101268097 

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Top 50 coexpressed genes to 4340540 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3040   Spliceosome  5 177 4.46
 osa230   Purine metabolism  1 91 -
 osa3013   Nucleocytoplasmic transport  2 109 -
 osa3015   mRNA surveillance pathway  2 115 -
 osa564   Glycerophospholipid metabolism  1 120 -

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osa:LOC4340540 (transcription termination factor MTEF1, chloroplastic) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4340540
osa-r.5
for
4340540
osa-m.8
for
4340540
osa-u.4
for
9266609
osa-u.4
for
9267605
osa-u.4
for
4330735
sly-u.4
for
104647140
sly-u.4
for
104647052
sly-u.4
for
101268097
1 LOC4330736 uncharacterized LOC4330736 4330736 Os02g0749900 6.1 4.5
 7.7
 2.3
2.1
 1.9
1.6
 1.4
0.9
 4.8
4.6
 3.6
2.9
 1.3
1.2
2 LOC4331316 AT-hook motif nuclear-localized protein 2 4331316 Os03g0105700 6.0 4.7
 7.3
 0.7
 1.0
 0.9


3 LOC4338741 uncharacterized LOC4338741 4338741 Os05g0403400 5.6 3.6
 7.7
 3.1
2.0
 2.8
1.8
 1.6
1.3
 3.1
 0.4
 1.4
4 LOC4340536 transcription termination factor MTERF2, chloroplastic 4340536 Os06g0224400 5.6 4.4
 6.8
 2.3
2.1
 1.9
1.6
 1.4
0.9
 4.8
4.6
 3.6
2.9
 1.3
1.2
5 LOC4350026 transcription termination factor MTERF2, chloroplastic 4350026 Os11g0206200 5.4 2.1
 8.7
 1.4
1.3
 1.4
1.3
 0.9
0.8


6 LOC4343036 BTB/POZ domain-containing protein At5g41330 4343036 Os07g0419200 5.4 2.7
 8.1
 1.2
 0.5
 0.4
 1.7
0.5
 1.5
0.7
 0.4
-0.8
7 LOC4331168 protein KINESIN LIGHT CHAIN-RELATED 2 4331168 Os02g0820300 5.1 4.2
 5.9
 1.1
 1.4
 1.6
 2.2
 0.4
 0.6
8 LOC4332202 uncharacterized LOC4332202 4332202 Os03g0240400 4.6 3.8
 5.4
 0.8
 1.2
 0.8


9 LOC4347303 protein transport protein SEC31 4347303 Os09g0463700 4.6 2.2
 6.9
 1.6
1.1
 1.0
0.0
 0.9
0.2


10 LOC4335071 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like 4335071 4.4 5.5
 3.3
 1.4
 0.8
 0.8
 3.1
0.6
 0.2
-0.5
 0.3
-0.7
11 LOC4325217 uncharacterized LOC4325217 4325217 Os01g0148700 4.4 5.3
 3.5
 2.6
 1.0
 0.7


12 LOC4344030 probable transcription factor At5g28040 4344030 Os07g0636100 4.4 2.9
 5.8
 1.8
0.2
 0.4
-0.2
 0.6
-0.1
 -0.5
-0.8
 -0.5
-0.8
 -0.8
-0.9
13 LOC4335638 SWI/SNF complex component SNF12 homolog 4335638 Os04g0382100 4.4 4.4
 4.3
 1.2
 0.6
 1.4
 3.2
2.6
 0.3
-0.5
 -0.4
-1.2
14 LOC4327063 nuclear pore complex protein NUP35 4327063 Os01g0200500 4.4 4.0
 4.8
 1.6
 1.8
 0.7
 -0.7
 -1.7
 -0.7
15 LOC4328057 uncharacterized LOC4328057 4328057 Os02g0113800 4.3 5.8
 2.8





16 LOC4327681 glycylpeptide N-tetradecanoyltransferase 1 4327681 Os01g0708100 4.3 3.5
 5.0
 1.1
 1.4
 1.8
 2.6
2.3
 -0.2
-1.1
 0.3
-1.1
17 LOC4328475 proline-rich protein PRCC 4328475 Os02g0175900 4.2 4.7
 3.7
 0.7
 0.4
 -0.4
 0.4
 -0.9
 -0.7
18 LOC4329211 T-complex protein 1 subunit delta 4329211 Os02g0332200 4.2 4.8
 3.6
 2.6
 2.2
 1.9
 0.9
 0.1
 -0.6
19 LOC4339711 probable DNA-3-methyladenine glycosylase 2 4339711 Os05g0579100 4.2 2.7
 5.7
 1.3
 0.6
 0.8
 0.8
-0.1
 -1.5
-2.3
 1.4
-1.1
20 LOC4340926 uncharacterized LOC4340926 4340926 Os06g0332500 4.2 3.0
 5.4
 2.6
2.3
 2.3
1.7
 0.6
0.5


21 LOC4336449 ATP-dependent Clp protease proteolytic subunit 4336449 Os04g0525600 4.1 4.1
 4.2
 1.6
 1.8
 0.8
 3.1
 1.5
 0.1
22 LOC4349761 protein TRAUCO 4349761 Os11g0146500 4.1 4.0
 4.3
 1.7
0.6
 1.4
0.8
 1.9
0.9
 0.0
 -0.4
 -0.7
23 LOC4341706 U5 small nuclear ribonucleoprotein 40 kDa protein 4341706 Os06g0653800 4.1 2.7
 5.5
 1.4
 1.3
 0.3
 1.2
 -0.2
 -1.3
24 LOC4350918 uncharacterized LOC4350918 4350918 Os11g0615100 4.1 4.7
 3.5
 0.4
 2.0
 0.8
 2.4
 0.8
 -1.7
25 LOC4340875 atherin 4340875 Os06g0316100 4.1 2.8
 5.3
 1.3
 0.1
 0.1


26 LOC4342294 uncharacterized LOC4342294 4342294 Os07g0123000 4.1 3.4
 4.7
 1.3
1.3
 0.8
0.4
 1.1
0.3


27 LOC4334352 protein WHAT'S THIS FACTOR 1 4334352 Os03g0786600 4.0 2.5
 5.5
 0.7
 0.4
 0.1
 1.0
 0.9
 1.6
28 LOC4342530 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 4342530 Os07g0175100 4.0 2.7
 5.3
 1.2
 0.2
 0.6
 2.0
 -0.1
 0.3
29 LOC4347200 uncharacterized LOC4347200 4347200 Os09g0446000 4.0 4.3
 3.7
 0.8
 0.7
 0.7
 0.3
 0.8
 0.8
30 LOC4347726 mediator of RNA polymerase II transcription subunit 4 4347726 Os09g0540500 4.0 2.8
 5.2
 1.9
 1.5
 1.6
 -0.4
-0.4
 -0.6
-1.2
 1.5
-0.5
31 LOC4338280 uncharacterized LOC4338280 4338280 Os05g0277200 3.9 4.0
 3.8
 1.2
0.2
 0.5
0.2
 0.3
-0.0
 1.0
 0.6
 -0.8
32 LOC4349037 pentatricopeptide repeat-containing protein At2g20710, mitochondrial 4349037 Os10g0501300 3.9 3.3
 4.5
 1.9
1.1
 1.7
1.5
 1.0
 0.0
-0.5
 -0.7
-1.0
 2.7
1.3
33 LOC4347477 uncharacterized LOC4347477 4347477 Os09g0499600 3.9 4.3
 3.5
 0.5
 -0.4
 0.6
 -1.0
 0.6
 0.1
34 LOC4337147 UBP1-associated protein 2B 4337147 Os04g0636900 3.9 3.2
 4.6
 0.7
 0.5
 1.2


35 LOC4327779 exportin-2 4327779 Os01g0235400 3.9 4.1
 3.6
 2.3
 2.0
 1.0
 1.9
 0.4
 0.7
36 LOC4344352 manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like 4344352 OSNPB_070688000 3.9 3.0
 4.8
 1.7
-0.5
 1.8
-0.1
 -0.1
-0.3
 1.1
 -0.7
 -2.5
37 LOC4342669 DEAD-box ATP-dependent RNA helicase 52B-like 4342669 OSNPB_070202100 3.8 3.6
 4.1
 1.5
0.5
 1.5
0.4
 1.8
1.0
 1.7
0.1
 -0.2
-0.7
 1.2
-1.0
38 LOC4339634 eukaryotic translation initiation factor 3 subunit D 4339634 Os05g0566500 3.8 4.3
 3.4
 2.9
 1.9
 1.6
 1.4
 -0.3
 -0.0
39 LOC4337931 protein transport protein SEC31 4337931 Os05g0169400 3.8 2.4
 5.2
 1.2
0.9
 0.6
0.1
 0.2
0.1
 -1.2
-2.0
 -2.5
-3.7
 0.9
-0.2
40 LOC4328550 protein TIC 21, chloroplastic 4328550 Os02g0187600 3.8 3.4
 4.2
 0.9
0.2
 1.0
0.8
 1.0
-0.1
 2.9
 1.9
 2.3
41 LOC4344924 histone-lysine N-methyltransferase ASHR2 4344924 Os08g0205300 3.8 2.6
 4.9
 3.0
 1.8
 0.3
 1.2
 1.5
 -0.2
42 LOC4340228 serine/threonine-protein phosphatase PP1 4340228 Os06g0164100 3.8 2.7
 4.8
 0.7
0.6
 1.0
-0.1
 0.7
0.6
 2.8
1.6
 0.8
0.2
 0.7
0.1
43 LOC4332538 eukaryotic translation initiation factor 2 subunit alpha homolog 4332538 Os03g0296400 3.7 3.8
 3.6
 1.0
 1.8
 0.7
 0.5
 -0.3
 -1.6
44 LOC4334816 cleavage and polyadenylation specificity factor subunit 3-I 4334816 Os03g0852900 3.7 4.7
 2.6
 1.4
 1.8
 0.1
 0.9
 -0.5
 1.7
45 LOC4328237 spliceosome-associated protein 130 A 4328237 Os02g0137400 3.7 4.2
 3.1
 1.3
 0.4
 0.3
 0.2
 -0.5
 -0.0
46 LOC4326510 early nodulin-20 4326510 Os01g0939400 3.7 2.5
 4.8
 0.4
 0.9
 0.9
 1.1
 -1.4
 -0.8
47 LOC4332861 U4/U6 small nuclear ribonucleoprotein PRP4-like protein 4332861 Os03g0355400 3.6 2.5
 4.8
 1.2
1.1
 0.8
0.7
 -0.3
-1.5
 0.8
 0.4
 0.1
48 LOC4342149 coiled-coil domain-containing protein 12 4342149 Os06g0730800 3.6 3.4
 3.9
 1.2
 0.5
 0.6
 0.8
 -0.4
 0.2
49 LOC4346064 methyltransferase-like protein 13 4346064 Os08g0520400 3.6 2.1
 5.2
 1.0
 0.8
 1.2
 0.9
 0.5
 1.0
50 LOC4336969 pentatricopeptide repeat-containing protein At1g79490, mitochondrial 4336969 Os04g0612800 3.6 1.7
 5.5
 2.6
 0.7
 0.7
 2.0
 -0.6
 0.2
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