Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4340846   trigger factor-like protein TIG, Chloroplastic 
 osa-r.5   4340846   trigger factor-like protein TIG, Chloroplastic 
 osa-m.8   4340846   trigger factor-like protein TIG, Chloroplastic 
 ath-u.4   AT5G55220   trigger factor type chaperone family protein 
 gma-u.4   100812597   trigger factor-like protein TIG, Chloroplastic 
 gma-u.4   100805543   trigger factor-like protein TIG, Chloroplastic 
 sly-u.4   TIG   trigger factor-like protein TIG, Chloroplastic 
 ppo-u.4   7474843   trigger factor-like protein TIG, Chloroplastic 
 mtr-u.4   11427367   trigger factor-like protein TIG, Chloroplastic 

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Top 50 coexpressed genes to 4340846 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa970   Aminoacyl-tRNA biosynthesis  8 70 11.74
 osa3010   Ribosome  4 336 2.27
 osa3060   Protein export  3 49 3.82
 osa195   Photosynthesis  1 77 -
 osa3018   RNA degradation  2 112 -

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osa:LOC4340846 (trigger factor-like protein TIG, Chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4340846
osa-r.5
for
4340846
osa-m.8
for
4340846
ath-u.4
for
AT5G55220
gma-u.4
for
100812597
gma-u.4
for
100805543
sly-u.4
for
TIG
ppo-u.4
for
7474843
mtr-u.4
for
11427367
1 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 8.7 7.6
 9.9
 7.4
2.8
 4.5
3.1
 5.5
3.7
 5.8
2.6
 3.5
0.9
 3.5
3.4
2 LOC4343250 asparagine--tRNA ligase, chloroplastic/mitochondrial 4343250 Os07g0485400 8.4 7.0
 9.7
 4.7
 5.0
4.3
 4.5
4.3
 6.9
 4.9
2.3
 2.2
3 LOC4328072 uncharacterized LOC4328072 4328072 Os02g0115600 7.9 7.3
 8.5
 8.7
 4.9
 4.4
 7.6
 5.7
 2.1
4 LOC4333618 transcription antitermination protein NusB 4333618 Os03g0656900 7.9 8.9
 6.9
 5.7
 5.6
4.2
 4.8
3.6
 7.6
 5.8
 7.3
5 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 7.9 6.2
 9.5
 10.8
 5.9
 5.4
 6.3
 4.9
 5.3
6 LOC4339910 ruBisCO large subunit-binding protein subunit beta, chloroplastic 4339910 Os06g0114000 7.6 6.0
 9.3
 15.7
6.7
 5.5
5.0
 5.2
4.6
 8.1
7.1
 3.4
2.8
 4.0
3.5
7 wsl6 white stripe leaf6 9271571 OSNPB_050567300 7.3 7.2
 7.3
 11.3
 8.4
0.8
 5.5
0.2
 5.3
 5.6
 5.1
8 LOC4340929 uncharacterized LOC4340929 4340929 Os06g0332800 7.2 7.7
 6.7
 7.2
 5.7
5.0
 6.3
5.3
 5.3
 3.3
0.8
 3.9
9 LOC4346605 30S ribosomal protein 2, chloroplastic 4346605 Os09g0279500 7.1 7.8
 6.4
 11.1
 7.4
5.6
 7.8
4.9
4.6
 6.0
10 LOC4325387 cell division protein FtsY homolog, chloroplastic 4325387 Os01g0958100 7.1 7.4
 6.8
 5.1
 1.8
 2.1
 9.0
 7.4
 3.0
11 LOC4350988 GTPase Der 4350988 Os11g0638000 6.8 5.1
 8.6
 5.5
 5.7
 5.6
 6.0
 2.1
 2.4
12 LOC4341108 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic 4341108 Os06g0498900 6.7 5.6
 7.9
 6.3
 3.5
 3.3
 4.0
 3.1
 2.3
13 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 6.6 6.0
 7.2
 7.7
 5.7
 5.7
 6.1
5.5
 4.3
3.3
 5.5
14 LOC4330025 lysine--tRNA ligase, chloroplastic/mitochondrial 4330025 Os02g0623500 6.6 6.3
 6.8
 5.7
 5.1
 4.7
 7.0
 2.3
 2.0
15 LOC4329119 uncharacterized LOC4329119 4329119 Os02g0307800 6.6 7.3
 5.8
 3.9
 4.2
1.3
 3.8
1.6
 3.8
 5.4
 2.8
-0.5
16 LOC4332018 methionine--tRNA ligase, chloroplastic/mitochondrial 4332018 Os03g0209600 6.5 5.4
 7.6
 6.2
 5.8
5.7
 6.4
5.8
 5.7
 5.4
 2.2
17 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 6.5 5.0
 8.0
 5.5
 5.5
3.9
 7.5
5.7
 8.8
 3.6
2.3
 7.0
18 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 6.5 6.3
 6.6
 5.0
0.0
 2.8
 3.9
 5.6
1.8
 3.4
3.3
 4.8
19 LOC4351050 peptide chain release factor APG3, chloroplastic 4351050 Os11g0657100 6.4 6.4
 6.5
 10.8
 3.3
3.2
 3.1
2.4
 7.5
 2.6
 2.7
20 LOC4332957 RNA-binding protein CP29B, chloroplastic 4332957 Os03g0376600 6.4 7.1
 5.8
 3.4
2.7
 5.3
5.2
 5.2
4.8
 6.9
6.0
 6.3
3.4
 3.9
21 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 6.4 6.4
 6.4
 6.1
 4.5
3.9
 6.3
5.0
 6.6
 2.7
 4.0
22 LOC4345097 preprotein translocase subunit SECY, chloroplastic-like 4345097 OSNPB_080254500 6.4 7.6
 5.2
 4.3
 5.0
 6.0
 5.2
 0.9
0.6
 5.0
23 LOC4327567 Ribonuclease III domain-containing protein RNC1, chloroplastic 4327567 OSNPB_010810100 6.4 6.0
 6.7
 4.6
 5.9
4.9
 6.0
4.8
 6.5
 2.6
 4.9
24 LOC4350829 CDK5RAP1-like protein 4350829 OSNPB_110592800 6.3 6.4
 6.3
 5.5
 2.6
2.4
 5.0
4.6
 7.2
 4.1
 3.0
25 LOC4348816 tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 4348816 Os10g0461100 6.3 6.4
 6.1
 4.6
 6.6
5.7
 5.3
5.2
 5.5
 3.6
1.8
 3.1
26 LOC4324049 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 4324049 Os01g0507900 6.3 7.4
 5.1
 3.9
 3.9
2.5
 4.0
2.0
 7.3
 5.1
 6.2
27 LOC4337177 glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial-like 4337177 6.3 6.6
 5.9
 7.0
 3.3
 3.9
 7.3
 2.1
 3.0
28 LOC4345271 ribonuclease E/G-like protein, chloroplastic 4345271 Os08g0323600 6.2 5.4
 7.1
 2.9
 5.7
3.5
 4.5
4.1
 7.9
 4.9
 3.6
29 LOC4343267 peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic 4343267 Os07g0490400 6.2 6.2
 6.2
 4.2
 6.2
3.1
 6.3
2.6
 3.7
 1.7
 3.3
30 LOC4332087 DEAD-box ATP-dependent RNA helicase 47B-like 4332087 OSNPB_030219700 6.2 5.3
 7.1
 5.5
 3.4
1.4
 4.3
2.6
 7.1
 1.9
 2.7
31 LOC4326614 DEAD-box ATP-dependent RNA helicase 25-like 4326614 OSNPB_010618400 6.1 4.8
 7.5
 3.8
0.4
 2.0
1.1
 2.9
2.5
 5.0
 2.4
1.1
 3.1
1.3
32 LOC4330582 ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 4330582 Os02g0725200 6.1 6.1
 6.2
 4.6
 4.9
 5.1
 4.7
 6.3
 5.1
33 LOC4347821 cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial-like 4347821 Os09g0556500 6.1 5.3
 7.0
 6.1
 4.6
2.5
 4.9
4.4
 4.0
 4.3
 2.1
34 LOC9270258 protease Do-like 2, chloroplastic 9270258 Os05g0147500 6.1 5.3
 6.9
 5.7
 5.2
4.3
 5.9
5.3
 5.7
3.2
 6.9
1.5
 4.1
35 LOC4346294 28 kDa ribonucleoprotein, chloroplastic 4346294 Os08g0557100 6.0 5.2
 6.9
 7.5
6.3
 8.7
5.0
 7.2
4.2
 9.4
 3.1
2.8
 4.4
2.5
36 LOC4331652 putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic 4331652 Os03g0152700 6.0 6.0
 6.1
 4.4
 3.9
 3.8
 5.1
 3.4
 3.8
37 RA1 rice albino1 4339847 Os06g0103600 6.0 5.3
 6.7
 6.4
 3.7
 3.8
 4.7
 4.0
2.3
 2.9
38 LAS lethal albinic seedling 4329580 Os02g0538000 5.9 5.6
 6.2
 4.8
 4.6
 4.7
 4.9
 4.0
 3.5
39 LOC4334030 putative rRNA methyltransferase YlbH 4334030 Os03g0736400 5.9 5.8
 6.0
 6.7
 3.1
 2.2
 6.5
 2.8
 4.3
40 LOC4325010 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 4325010 Os01g0901900 5.9 6.0
 5.7
 6.8
 7.1
4.2
 5.8
3.7
 6.8
 3.8
 3.2
41 LOC4330763 50S ribosomal protein L29, chloroplastic 4330763 Os02g0754300 5.8 6.0
 5.6
 4.7
 5.2
4.9
 5.9
5.7
 7.2
4.0
 3.7
2.5
 2.7
42 LOC9267495 signal recognition particle 54 kDa protein, chloroplastic 9267495 Os11g0153600 5.8 6.4
 5.3
 8.1
 8.4
4.4
 6.6
3.1
 4.9
 4.6
3.7
 5.3
43 LOC4328994 proteinaceous RNase P 1, chloroplastic/mitochondrial 4328994 Os02g0273800 5.8 4.5
 7.2
2.8
 3.8
 4.9
 1.1
 4.3
44 LOC4327742 uncharacterized RNA methyltransferase pc1998 4327742 Os01g0920300 5.8 5.7
 5.9
 5.0
 3.5
 2.9
 5.5
 2.0
 2.4
45 LOC4337588 uncharacterized protein At5g02240 4337588 Os05g0110300 5.7 6.3
 5.2
 8.0
1.6
 3.5
-0.3
 2.0
-0.6
 4.6
 4.2
 2.0
0.8
46 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 5.7 4.7
 6.7
 6.6
 6.0
4.2
 7.1
4.8
 5.7
 4.2
 3.0
47 LOC4344860 pentatricopeptide repeat-containing protein At3g59040 4344860 Os08g0191900 5.7 4.4
 7.0
 5.9
 5.6
5.5
 5.8
4.9
 10.3
 6.0
 2.5
48 LOC4349290 carotene epsilon-monooxygenase, chloroplastic 4349290 Os10g0546600 5.7 4.0
 7.4
 5.5
 4.2
4.1
 4.4
2.5
 4.2
 2.9
 4.7
49 LOC4352408 phenylalanine--tRNA ligase, chloroplastic/mitochondrial 4352408 Os12g0533700 5.7 5.4
 6.0
 5.6
 5.2
3.4
 5.6
3.2
 7.0
 2.7
 6.0
50 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 5.7 6.2
 5.2
 5.5
 3.5
-0.0
 4.5
-0.5
 5.6
 4.1
 3.2
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