Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   9270399   DNA-directed RNA polymerase I subunit 1 
 osa-r.5   9270399   DNA-directed RNA polymerase I subunit 1 
 ath-u.4   NRPA1   nuclear RNA polymerase A1 
 gma-u.4   100779532   DNA-directed RNA polymerase I subunit 1 
 sly-u.4   101260591   DNA-directed RNA polymerase I subunit 1 
 ppo-u.4   18099840   DNA-directed RNA polymerase I subunit 1 
 mtr-u.4   11444522   DNA-directed RNA polymerase I subunit 1 

close


Top 50 coexpressed genes to 9270399 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3008   Ribosome biogenesis in eukaryotes  10 86 14.69
 osa3013   Nucleocytoplasmic transport  4 109 4.09
 osa3020   RNA polymerase  2 51 2.29
 osa3018   RNA degradation  1 112 -
 osa970   Aminoacyl-tRNA biosynthesis  1 117 -

close


osa:LOC9270399 (DNA-directed RNA polymerase I subunit 1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
9270399
osa-r.5
for
9270399
ath-u.4
for
NRPA1
gma-u.4
for
100779532
sly-u.4
for
101260591
ppo-u.4
for
18099840
mtr-u.4
for
11444522
1 LOC4342673 rRNA biogenesis protein RRP5 4342673 Os07g0203300 8.3 11.2
 16.9
 14.3
12.4
 15.7
 9.3
 11.7
2 LOC4331982 uncharacterized LOC4331982 4331982 Os03g0203100 8.1 11.2
 8.0
 7.8
6.4
 11.3
 6.2
 9.0
3 LOC4326297 something about silencing protein 10 4326297 Os01g0104800 7.1 9.3
 9.0
 9.7
5.1
 5.9
1.6
 3.8
 7.6
4 LOC4346491 DNA-directed RNA polymerase 1B, mitochondrial 4346491 Os09g0246200 7.0 10.0
 10.3
7.0
 11.8
10.5
 10.4
6.9
 5.3
4.5
 12.8
10.2
5 LOC4351600 nucleolar protein 6 4351600 Os12g0166500 7.0 9.1
 12.1
 10.1
8.4
 10.2
 5.6
 11.2
6 LOC4329995 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like 4329995 OSNPB_020617700 6.8 9.2
 7.5
 6.0
 11.0
 5.9
 8.6
7 LOC4343142 tetratricopeptide repeat protein 27 homolog 4343142 Os07g0455100 6.7 9.0
 6.1
2.5
 8.4
6.4
 9.3
 5.2
 8.7
8 LOC4348797 midasin 4348797 Os10g0456950 6.6 8.5
 10.0
 12.7
11.0
 10.8
 4.9
 8.5
9 LOC4343611 elongator complex protein 1 4343611 Os07g0563700 6.6 8.4
 5.6
 8.2
 6.6
 5.8
4.5
 7.6
10 LOC9269589 uncharacterized LOC9269589 9269589 Os10g0154600 6.6 8.7
 2.6
 6.6
 5.4
 3.3
 4.3
11 LOC107279412 small subunit processome component 20 homolog 107279412 Os01g0584800 6.5 9.4
 12.2
 12.5
 12.4
 4.9
 9.1
12 LOC4351627 RNA cytidine acetyltransferase 1 4351627 Os12g0170700 6.4 8.4
 9.4
8.9
 11.5
9.9
 11.7
 5.3
4.6
 10.1
13 LOC9270457 DNA-directed RNA polymerase I subunit 2 9270457 Os10g0495600 6.3 9.1
 14.4
 8.0
5.8
 12.3
 6.0
 15.6
14 LOC9270304 lon protease homolog, mitochondrial-like 9270304 OSNPB_070689300 6.3 8.3
 5.0
 8.3
7.2
 9.6
 4.9
3.6
 7.1
15 LOC4341186 DEAD-box ATP-dependent RNA helicase 31-like 4341186 OSNPB_060526600 6.3 9.0
 7.0
4.0
 4.7
4.1
 8.1
 4.4
3.0
 7.1
4.8
16 LOC4337062 uncharacterized LOC4337062 4337062 Os04g0625350 6.1 7.6
 9.2
 6.9
6.4
 7.0
 6.6
 9.2
17 LOC4336577 uncharacterized protein At3g06530 4336577 Os04g0548300 6.1 7.7
 17.7
 15.9
11.3
 12.0
 5.3
 13.6
18 LOC9270869 isoleucine--tRNA ligase, cytoplasmic 9270869 Os06g0645400 6.0 7.9
 4.4
 5.3
4.1
 5.8
 4.0
2.5
 6.5
19 LOC4337032 nucleolin 2-like 4337032 OSNPB_040620700 6.0 7.1
 6.6
3.0
 9.9
9.7
 8.0
 3.8
2.7
 7.4
20 LOC4336254 DNA-directed RNA polymerase III subunit 1 4336254 Os04g0492300 6.0 7.7
 5.0
 8.2
 9.9
 4.8
 7.8
4.1
21 LOC4330930 RRP12-like protein 4330930 Os02g0782100 5.9 7.2
 12.6
 10.5
6.7
 7.0
 4.1
 13.2
6.0
22 LOC4331367 uncharacterized LOC4331367 4331367 Os03g0111800 5.9 7.8
 4.0
 7.1
 5.2
 2.4
 8.0
23 LOC4336098 uncharacterized LOC4336098 4336098 Os04g0466700 5.9 7.5
 5.2
 4.5
3.4
 8.5
 4.9
3.2
 6.3
24 LOC4351580 nucleolar complex protein 2 homolog 4351580 Os12g0163200 5.8 7.4
 8.8
 9.4
 4.5
 6.3
 7.5
25 LOC4344765 thyroid adenoma-associated protein homolog 4344765 Os08g0169700 5.8 7.4
 6.7
 8.0
 6.5
 5.6
5.1
 4.9
26 LOC9266752 nuclear pore complex protein NUP160 9266752 Os02g0142500 5.8 8.3
 6.6
 6.8
6.7
 7.0
 4.4
 5.6
27 LOC4333869 zinc finger protein VAR3, chloroplastic 4333869 Os03g0708900 5.7 7.3
 3.6
 4.4
3.7
 6.3
 2.3
 7.4
28 LOC4332742 ribosome biogenesis protein bms1 4332742 Os03g0333100 5.7 8.1
 13.0
 15.5
14.5
 14.8
 5.0
 11.2
29 LOC4338325 proline-, glutamic acid- and leucine-rich protein 1 4338325 Os05g0295900 5.6 7.4
 8.3
 4.7
4.4
 6.1
 2.4
 8.1
5.9
30 LOC4333384 nucleolar protein 14 4333384 Os03g0598200 5.6 6.8
 11.9
 10.7
9.5
 13.1
 6.3
 7.8
6.4
31 LOC4335968 peptidyl-prolyl cis-trans isomerase FKBP53 4335968 Os04g0446500 5.6 6.9
 7.1
6.5
 8.0
6.3
 6.2
4.3
 4.0
4.0
 10.2
7.8
32 LOC4333495 U3 snoRNP-associated protein-like YAOH 4333495 OSNPB_030625900 5.6 7.2
 9.3
 7.5
7.1
 7.8
 5.3
4.6
 7.5
33 LOC4347343 tRNA (cytosine(34)-C(5))-methyltransferase 4347343 Os09g0471900 5.5 6.5
 5.1
4.8
 6.0
0.3
 7.6
5.2
 2.9
 9.6
5.1
34 LOC4352218 DEAD-box ATP-dependent RNA helicase 28-like 4352218 OSNPB_120481100 5.5 6.6
 7.6
 11.5
9.1
 11.5
 5.5
 9.5
35 LOC4336833 transducin beta-like protein 3 4336833 Os04g0592700 5.5 7.3
 9.0
 10.6
 12.2
 6.2
 9.0
36 LOC4350096 calmodulin-interacting protein 111 4350096 Os11g0220400 5.5 7.7
 5.1
 3.9
 9.0
 4.5
 7.7
3.0
37 LOC4338508 importin subunit beta-1 4338508 Os05g0353400 5.5 7.0
 4.9
3.8
4.4
 4.2
0.8
38 LOC4331644 WD repeat-containing protein 3 4331644 Os03g0151700 5.4 6.7
 13.9
 12.8
5.5
 11.0
 5.8
 11.7
39 LOC4352760 WD repeat-containing protein 75 4352760 Os12g0609800 5.4 6.5
 10.2
 12.6
9.2
 9.1
 5.6
1.1
 7.9
40 LOC4350322 pre-rRNA-processing protein TSR1 homolog 4350322 Os11g0298400 5.4 6.4
 9.0
 9.9
8.5
 8.9
 5.1
 8.7
41 LOC4345386 putative methyltransferase NSUN6 4345386 Os08g0365900 5.4 6.8
 3.0
 2.1
 3.6
 0.3
 2.9
42 LOC4339641 putative rRNA methyltransferase 4339641 Os05g0567400 5.4 6.5
 9.9
 10.8
9.5
 6.8
5.5
 5.7
 12.2
43 LOC4331821 tubulin--tyrosine ligase-like protein 12 4331821 Os03g0179000 5.4 6.9
 7.6
 5.9
 9.1
 2.4
 2.8
44 LOC4339341 periodic tryptophan protein 2 4339341 Os05g0519500 5.3 6.9
 7.8
 12.0
11.3
 9.6
 6.2
5.2
 11.2
45 LOC4333935 protein ILITYHIA 4333935 Os03g0721200 5.3 6.8
 6.6
 4.5
4.0
 4.9
 3.9
 5.5
46 LOC4347787 25S rRNA (cytosine-C(5))-methyltransferase nop2 4347787 Os09g0551300 5.3 6.0
 8.8
6.3
 9.2
8.9
 4.6
4.2
 6.6
 9.3
47 LOC4329957 pentatricopeptide repeat-containing protein At1g79540 4329957 Os02g0611400 5.3 6.6
 4.8
 7.1
2.6
 4.8
 1.2
 5.2
48 LOC4351433 U3 small nucleolar ribonucleoprotein protein MPP10 4351433 Os12g0133900 5.3 6.2
 7.6
 9.5
7.3
 8.5
 3.5
2.7
 8.4
49 LOC4338555 pentatricopeptide repeat-containing protein At1g10270 4338555 Os05g0365500 5.2 6.7
 7.2
2.2
 7.5
6.2
 5.8
 4.4
3.5
 7.6
50 LOC4332118 nuclear pore complex protein NUP133 4332118 Os03g0225500 5.2 7.9
 7.8
 8.9
6.5
 4.0
 3.9
2.3
 8.2
The preparation time of this page was 2.1 [sec].