Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4341664   50S ribosomal protein L35, chloroplastic 
 osa-r.5   4341664   50S ribosomal protein L35, chloroplastic 
 osa-m.8   4341664   50S ribosomal protein L35, chloroplastic 
 ath-u.4   PRPL35   Ribosomal protein L35 
 gma-u.4   100305559   50S ribosomal protein L35 
 gma-u.4   100306481   uncharacterized LOC100306481 
 sly-u.4   101252000   50S ribosomal protein L35, chloroplastic 
 ppo-u.4   7493377   50S ribosomal protein L35, chloroplastic 
 mtr-u.4   11418675   50S ribosomal protein L35, chloroplastic 

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Top 50 coexpressed genes to 4341664 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  26 335 34.59
 osa860   Porphyrin metabolism  1 42 -
 osa260   Glycine, serine and threonine metabolism  1 67 -
 osa630   Glyoxylate and dicarboxylate metabolism  1 76 -
 osa195   Photosynthesis  2 77 -

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osa:LOC4341664 (50S ribosomal protein L35, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4341664
osa-r.5
for
4341664
osa-m.8
for
4341664
ath-u.4
for
PRPL35
gma-u.4
for
100305559
gma-u.4
for
100306481
sly-u.4
for
101252000
ppo-u.4
for
7493377
mtr-u.4
for
11418675
1 LOC4338460 uncharacterized LOC4338460 4338460 Os05g0337400 10.5 9.2
 11.7
 10.6
 8.6
7.8
 10.6
8.1
 9.7
 4.0
 5.6
2 LOC4338005 30S ribosomal protein S31, chloroplastic 4338005 Os05g0186000 9.8 7.9
 11.7
 12.4
 9.9
6.1
 9.2
6.8
 7.2
 3.0
 7.4
3 wgl2 white green leaf2 4334247 Os03g0769100 9.6 6.9
 12.3
 11.7
 8.1
5.6
 7.2
7.1
 8.5
 2.2
2.1
 8.2
4 LOC4331442 50S ribosomal protein L11 4331442 Os03g0122200 9.6 8.6
 10.5
 12.8
 5.4
 5.6
 6.4
 1.3
0.7
 10.1
5 LOC4331189 50S ribosomal protein L9, chloroplastic 4331189 Os02g0822600 9.1 6.5
 11.7
 10.9
 7.2
5.4
 8.9
7.0
 10.4
 1.7
 9.6
6 LOC4341869 50S ribosomal protein L24, chloroplastic 4341869 Os06g0683200 8.9 6.1
 11.7
 11.9
 6.2
5.6
 7.2
6.9
 9.2
 3.7
 9.4
7 LOC4332089 50S ribosomal protein L15, chloroplastic 4332089 Os03g0219900 8.9 9.2
 8.5
 11.1
 9.3
 10.8
 7.7
 4.3
0.5
 4.9
8 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 8.6 6.1
 11.2
 11.1
 8.5
 12.5
 8.1
6.2
 4.4
2.3
 6.3
9 LOC4334651 50S ribosomal protein L18, chloroplastic-like 4334651 OSNPB_030828100 8.5 7.8
 9.2
 11.8
 7.9
 11.5
 7.9
 2.7
2.4
 11.1
10 LOC4337526 50S ribosomal protein L28, chloroplastic 4337526 Os05g0101400 8.5 7.2
 9.7
 10.9
 5.5
 8.9
 10.2
 3.0
 4.3
11 LOC4333233 30S ribosomal protein S5, chloroplastic 4333233 Os03g0452300 8.4 8.6
 8.3
 12.6
 6.8
6.5
 9.5
7.4
 9.1
 2.5
 4.3
12 LOC4327257 50S ribosomal protein L27, chloroplastic-like 4327257 Os01g0924100 8.3 8.8
 7.8
 10.2
 7.2
6.4
 9.5
8.0
 10.4
 3.6
 10.1
13 LOC4334749 30S ribosomal protein S6 alpha, chloroplastic 4334749 Os03g0843400 8.3 7.9
 8.7
 14.7
 7.5
7.2
 9.7
7.7
 9.1
 4.2
 5.5
14 LOC4324275 50S ribosomal protein 5, chloroplastic 4324275 Os01g0278900 8.3 6.9
 9.7





15 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 8.2 4.6
 11.8
 10.3
 9.0
6.3
 10.2
5.7
 8.9
 2.2
 4.7
16 LOC4330763 50S ribosomal protein L29, chloroplastic 4330763 Os02g0754300 8.1 7.8
 8.5
 9.5
 8.8
6.7
 9.0
7.4
 7.3
6.0
 4.3
-0.0
 5.6
17 LOC4332730 uncharacterized LOC4332730 4332730 Os03g0331600 7.9 8.0
 7.8
 8.7
 5.5
5.3
 5.5
3.6
 5.3
 1.7
 5.4
18 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 7.8 5.7
 9.8
 10.0
 8.0
6.4
 9.1
5.7
 7.5
 2.4
 5.8
19 LOC4327541 50S ribosomal protein L34, chloroplastic 4327541 Os01g0805000 7.6 6.5
 8.7
 12.9
 8.2
7.2
 8.6
7.4
 8.8
 4.0
 8.0
20 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 7.4 6.0
 8.8
 12.2
 7.6
5.6
 8.7
6.7
 10.3
 4.0
 7.2
21 LOC4340929 uncharacterized LOC4340929 4340929 Os06g0332800 7.4 5.9
 8.9
 9.6
 4.9
4.5
 5.7
4.2
 5.6
 3.1
0.7
 5.4
22 LOC4334555 50S ribosomal protein L17, chloroplastic 4334555 Os03g0815400 7.3 6.6
 8.0
 13.7
 6.8
6.0
 5.6
5.4
 8.3
6.2
 3.8
1.8
 6.8
23 LOC4333848 30S ribosomal protein S13, chloroplastic 4333848 Os03g0704000 7.3 4.9
 9.7
 13.8
 7.3
5.5
 10.4
5.9
 11.7
 2.8
2.6
 6.2
24 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 7.3 5.4
 9.1
 9.0
3.0
 8.6
 10.7
 5.1
4.8
 2.0
1.3
 9.3
25 LOC4337506 30S ribosomal protein S17, chloroplastic-like 4337506 Os04g0691600 7.1 5.8
 8.4
6.6
6.3
 8.9
7.2
 7.1
 3.3
 7.6
26 LOC4329578 2-Cys peroxiredoxin BAS1, chloroplastic-like 4329578 OSNPB_020537700 6.6 6.0
 7.2
 10.6
6.6
 7.6
6.8
 7.8
7.4
 11.1
2.8
 3.6
3.2
 7.2
5.5
27 ASL2 Albino Seedling Lethal2 4328932 Os02g0259600 6.5 5.3
 7.7
 13.5
 9.1
8.5
 11.5
9.0
 10.3
 2.0
0.6
 6.0
28 LOC4334910 uncharacterized LOC4334910 4334910 Os04g0105700 6.2 6.1
 6.3
 7.4
 5.5
 9.3
 4.3
 2.0
 3.7
29 LOC4331459 50S ribosomal protein L5, chloroplastic-like 4331459 OSNPB_030125000 6.2 5.8
 6.5
 12.1
 6.6
4.3
 8.4
4.4
 6.8
 2.3
1.7
 12.2
30 LOC4332652 30S ribosomal protein S1, chloroplastic 4332652 Os03g0315800 6.1 6.4
 5.8
 7.7
 5.1
3.8
 8.6
3.8
 6.6
2.2
 2.4
1.9
 7.8
31 LOC4331439 nascent polypeptide-associated complex subunit alpha-like protein 1 4331439 Os03g0121700 6.1 6.8
 5.4
 2.6
1.6
 1.3
1.1
 1.5
0.4
 1.2
0.5
 3.5
1.3
 2.4
2.1
32 LOC4332348 50S ribosomal protein L4, chloroplastic 4332348 Os03g0265400 6.1 6.0
 6.2
 8.8
 7.9
5.8
 8.4
7.5
 8.0
 2.4
 3.5
33 LOC4331942 30S ribosomal protein S10, chloroplastic 4331942 Os03g0196800 5.8 5.5
 6.1





34 LOC4334131 50S ribosomal protein L6, chloroplastic 4334131 Os03g0751400 5.8 3.7
 7.8
 10.0
 8.0
6.4
 9.1
5.7
 7.5
 2.4
 5.8
35 LOC4339629 uncharacterized LOC4339629 4339629 Os05g0565500 5.7 3.6
 7.9
1.5
0.5
 1.5
0.0
 1.5
 1.7
 2.7
36 LOC4328558 30S ribosomal protein S21, chloroplastic 4328558 Os02g0189000 5.7 5.8
 5.6
 11.9
 5.9
5.8
 9.0
7.4
 9.1
1.0
 2.5
 5.7
37 LOC4332392 uncharacterized LOC4332392 4332392 Os03g0271500 5.7 4.0
 7.4





38 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 5.6 5.3
 6.0
 8.5
 5.5
 11.2
 7.8
 0.9
 6.9
39 LOC4340391 putative peroxiredoxin Q, chloroplastic 4340391 OSNPB_060196300 5.3 3.9
 6.6
 9.9
 4.8
2.2
 6.3
2.6
 5.3
 2.1
0.6
 5.1
40 LOC4327918 protoporphyrinogen oxidase, chloroplastic-like 4327918 OSNPB_010286600 5.2 5.3
 5.1
 4.8
 7.2
 7.2
 2.2
 1.5
-0.4
 2.2
41 LOC4325387 cell division protein FtsY homolog, chloroplastic 4325387 Os01g0958100 5.2 4.2
 6.1
 2.7
 1.7
 1.5
 4.9
 0.9
 1.2
42 LOC4352538 psbP domain-containing protein 1, chloroplastic 4352538 Os12g0564400 5.1 4.3
 5.9
 6.1
 4.4
 4.6
 5.7
 1.9
0.7
 2.6
43 LOC4332466 50S ribosomal protein L10, chloroplastic 4332466 Os03g0284400 5.1 5.9
 4.2
 9.4
 5.1
 8.8
 8.2
 2.6
2.5
 9.2
44 LOC4349114 glycine cleavage system H protein, mitochondrial 4349114 OSNPB_100516100 4.9 5.5
 4.3
 5.0
3.5
 3.1
1.6
 3.1
2.4
 7.3
3.5
 1.2
0.2
 3.0
45 LOC4333624 ferredoxin C 1, chloroplastic 4333624 Os03g0659200 4.9 6.1
 3.7
6.5
2.1
 7.2
2.8
 4.1
 1.2
0.6
 5.6
46 LOC4337539 photosynthetic NDH subunit of lumenal location 5, chloroplastic 4337539 Os05g0103200 4.9 5.7
 4.1
 5.5
 6.8
4.7
 5.1
3.5
 5.8
 2.3
1.4
 2.7
47 LOC4335779 ferredoxin-1 4335779 Os04g0412200 4.8 3.4
 6.3





48 LOC4333313 uncharacterized LOC4333313 4333313 Os03g0578200 4.8 5.6
 4.0
 4.0
 4.4
1.5
 5.9
1.8
 4.6
 2.2
 4.4
49 LOC4324458 thioredoxin Y, chloroplastic-like 4324458 OSNPB_010963400 4.7 4.7
 4.7
 7.8
1.9
 2.0
0.4
 3.1
0.5
 3.9
 1.3
1.3
 3.7
50 LOC4334100 photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 4334100 Os03g0747700 4.7 4.3
 5.1
 3.0
 1.8
0.3
 1.9
1.8
 4.1
 0.2
 2.0
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