Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4341869   50S ribosomal protein L24, chloroplastic 
 osa-r.5   4341869   50S ribosomal protein L24, chloroplastic 
 osa-m.8   4341869   50S ribosomal protein L24, chloroplastic 
 ath-u.4   RPL24   Translation protein SH3-like family protein 
 gma-u.4   100306643   uncharacterized LOC100306643 
 gma-u.4   100500009   putative 50S ribosomal protein L24 
 sly-u.4   101261433   50S ribosomal protein L24, chloroplastic 
 ppo-u.4   18095878   50S ribosomal protein L24, chloroplastic 
 mtr-u.4   11407117   50S ribosomal protein L24, chloroplastic 

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Top 50 coexpressed genes to 4341869 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3010   Ribosome  22 335 27.22
 osa1240   Biosynthesis of cofactors  5 233 3.89
 osa860   Porphyrin metabolism  4 42 5.74
 osa3060   Protein export  2 49 2.32
 osa61   Fatty acid biosynthesis  1 47 -

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osa:LOC4341869 (50S ribosomal protein L24, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4341869
osa-r.5
for
4341869
osa-m.8
for
4341869
ath-u.4
for
RPL24
gma-u.4
for
100306643
gma-u.4
for
100500009
sly-u.4
for
101261433
ppo-u.4
for
18095878
mtr-u.4
for
11407117
1 LOC4332868 50S ribosomal protein L6, chloroplastic 4332868 Os03g0356300 14.6 12.4
 16.9
 11.1
 8.9
7.3
 10.4
7.4
 9.3
 5.5
 9.0
2 LOC4325555 50S ribosomal protein L13, chloroplastic 4325555 Os01g0749200 14.6 11.3
 17.9
 13.6
 7.2
 9.0
 8.9
4.6
 4.7
4.1
 5.8
3 LOC4334651 50S ribosomal protein L18, chloroplastic-like 4334651 OSNPB_030828100 12.9 10.1
 15.7
 12.4
 8.2
 6.5
 11.1
 4.1
3.2
 9.1
4 LOC4330763 50S ribosomal protein L29, chloroplastic 4330763 Os02g0754300 12.2 7.2
 17.2
 9.8
 13.0
7.1
 12.6
7.4
 12.6
8.9
 5.7
1.2
 6.5
5 LOC4328236 50S ribosomal protein L3, chloroplastic 4328236 Os02g0137200 11.3 8.1
 14.4
 10.5
 8.4
5.1
 9.2
4.7
 8.2
 5.1
 4.9
6 LOC4331189 50S ribosomal protein L9, chloroplastic 4331189 Os02g0822600 11.3 8.0
 14.5
 11.3
 8.1
4.7
 8.6
6.1
 10.4
 4.6
 10.2
7 ASL1 Albino Seedling Lethal1 4325273 Os01g0678600 10.8 6.3
 15.4
 11.5
 7.2
6.8
 8.8
6.4
 11.8
 5.1
 9.0
8 LOC4334131 50S ribosomal protein L6, chloroplastic 4334131 Os03g0751400 10.7 8.3
 13.1
 11.1
 8.9
7.3
 10.4
7.4
 9.3
 5.5
 9.0
9 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 10.5 9.3
 11.7
 8.4
0.5
 5.5
 7.1
 8.0
3.9
 3.6
3.5
 8.6
10 LOC4331442 50S ribosomal protein L11 4331442 Os03g0122200 10.2 8.2
 12.2
 13.7
 3.7
 4.4
 7.6
 2.5
1.3
 7.5
11 LOC4338005 30S ribosomal protein S31, chloroplastic 4338005 Os05g0186000 9.9 6.2
 13.5
 11.1
 6.4
5.3
 6.3
6.2
 8.9
 4.5
 7.5
12 LOC4338460 uncharacterized LOC4338460 4338460 Os05g0337400 9.7 6.3
 13.0
 11.2
 8.2
7.2
 8.9
8.4
 10.6
 5.5
 6.3
13 LOC4327541 50S ribosomal protein L34, chloroplastic 4327541 Os01g0805000 9.6 8.6
 10.7
 10.1
 6.7
4.7
 7.5
5.3
 7.9
 6.0
 7.9
14 LOC4333848 30S ribosomal protein S13, chloroplastic 4333848 Os03g0704000 9.6 8.4
 10.7
 15.4
 10.1
6.6
 10.9
6.1
 9.0
 4.8
2.3
 11.0
15 LOC4334555 50S ribosomal protein L17, chloroplastic 4334555 Os03g0815400 9.5 7.3
 11.7
 14.0
 6.1
5.3
 7.0
5.8
 13.2
6.7
 5.5
3.7
 5.3
16 ASL2 Albino Seedling Lethal2 4328932 Os02g0259600 9.4 6.7
 12.2
 11.6
 7.5
7.1
 8.8
6.3
 11.4
 3.4
2.1
 4.8
17 LOC4334749 30S ribosomal protein S6 alpha, chloroplastic 4334749 Os03g0843400 9.2 6.2
 12.3
 12.8
 7.8
6.0
 7.7
5.6
 7.9
 6.1
 4.7
18 LOC4341664 50S ribosomal protein L35, chloroplastic 4341664 Os06g0647100 8.9 6.1
 11.7
 11.9
 6.9
6.2
 7.2
5.6
 9.2
 3.7
 9.4
19 LOC4349608 elongation factor P 4349608 Os11g0116400 8.9 8.6
 9.1
 9.0
 5.9
2.9
 4.5
4.5
 6.2
 4.6
 6.4
20 LOC4332089 50S ribosomal protein L15, chloroplastic 4332089 Os03g0219900 8.8 6.9
 10.8
 13.0
 5.5
 4.9
 9.0
 5.0
1.8
 9.1
21 LOC4337506 30S ribosomal protein S17, chloroplastic-like 4337506 Os04g0691600 8.7 7.1
 10.4
4.1
3.2
 5.1
2.8
 8.1
 6.6
 5.7
22 wgl2 white green leaf2 4334247 Os03g0769100 8.7 6.3
 11.1
 12.1
 4.2
3.5
 4.8
4.4
 8.8
 4.1
3.2
 6.5
23 LOC4331459 50S ribosomal protein L5, chloroplastic-like 4331459 OSNPB_030125000 8.7 6.4
 11.0
 11.7
 8.1
4.5
 9.3
5.6
 8.7
 4.6
1.6
 12.8
24 LOC4332348 50S ribosomal protein L4, chloroplastic 4332348 Os03g0265400 8.1 6.1
 10.2
 8.8
 5.0
4.6
 5.9
5.9
 9.3
 4.8
 4.0
25 LOC4343662 ribosome-recycling factor, chloroplastic 4343662 OSNPB_070570700 8.1 6.4
 9.9
 9.0
 8.8
 9.3
 5.3
 3.9
 10.6
26 LOC4331439 nascent polypeptide-associated complex subunit alpha-like protein 1 4331439 Os03g0121700 8.1 8.6
 7.6
 3.1
1.7
 3.4
1.8
 2.4
0.6
 1.9
0.6
 2.6
2.0
 2.4
2.3
27 LOC9269534 ribosome-binding ATPase YchF 9269534 Os03g0781000 8.0 5.6
 10.5
 2.3
 4.8
 5.2
 3.3
 3.4
 3.4
28 LOC4324026 protein FLUORESCENT IN BLUE LIGHT, chloroplastic 4324026 Os01g0510600 8.0 7.8
 8.1
 8.1
 5.4
3.1
 5.5
4.6
 7.5
1.4
 1.6
 4.3
29 LOC4346605 30S ribosomal protein 2, chloroplastic 4346605 Os09g0279500 7.8 7.6
 8.0
 9.7
 8.0
5.6
 7.3
5.5
5.6
 7.0
30 LOC4333233 30S ribosomal protein S5, chloroplastic 4333233 Os03g0452300 7.7 5.3
 10.1
 13.1
 8.2
7.7
 9.7
8.2
 12.2
 4.5
 6.5
31 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 7.5 7.6
 7.4
 2.0
 3.8
0.4
 4.3
-0.1
 1.9
 2.9
 1.1
32 LOC4324275 50S ribosomal protein 5, chloroplastic 4324275 Os01g0278900 7.4 6.4
 8.4





33 LOC4339629 uncharacterized LOC4339629 4339629 Os05g0565500 7.4 4.5
 10.2
3.6
1.7
 3.1
2.1
 3.2
 1.9
 3.5
34 LOC4335962 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic 4335962 Os04g0445700 7.2 7.3
 7.1
 0.8
 3.1
0.8
 1.5
0.1
 3.0
0.4
 1.3
1.0
 0.6
0.5
35 LOC4340929 uncharacterized LOC4340929 4340929 Os06g0332800 7.1 5.6
 8.6
 7.8
 6.1
5.7
 7.8
7.0
 5.7
 3.9
1.9
 8.7
36 LOC4352460 nucleoside diphosphate kinase 2, chloroplastic 4352460 Os12g0548300 7.1 7.8
 6.4
 7.7
 4.5
3.9
 5.0
4.6
 9.7
4.8
 3.3
 2.5
37 LOC4348816 tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 4348816 Os10g0461100 7.0 6.7
 7.3
 6.0
 5.7
5.0
 5.1
4.1
 4.3
 3.8
0.9
 3.4
38 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 7.0 7.1
 6.8
 3.0
0.0
 6.5
5.4
 5.2
4.9
 4.5
0.2
 2.3
1.3
 2.6
1.2
39 LOC4325387 cell division protein FtsY homolog, chloroplastic 4325387 Os01g0958100 6.9 6.3
 7.5
 2.3
 3.2
 2.1
 5.9
 2.5
 1.4
40 LOC4338540 S-adenosylmethionine carrier 1, chloroplastic/mitochondrial 4338540 Os05g0361900 6.9 5.2
 8.6
 4.9
-1.3
 3.2
2.1
 4.1
2.9
 2.2
0.7
 2.5
1.2
 2.8
0.6
41 LOC4346136 glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic-like 4346136 OSNPB_080532200 6.9 7.1
 6.8
 6.3
2.0
 6.1
4.7
 7.1
5.8
 4.8
 2.5
 5.4
42 LOC9267495 signal recognition particle 54 kDa protein, chloroplastic 9267495 Os11g0153600 6.9 6.0
 7.7
 8.2
 6.2
2.8
 5.8
3.3
 3.0
 4.2
1.8
 4.6
43 LOC4334537 magnesium-chelatase subunit ChlD, chloroplastic-like 4334537 OSNPB_030811100 6.8 5.6
 8.0
 6.5
 4.2
4.0
 5.5
4.3
 6.2
 2.7
 4.9
44 LOC4327918 protoporphyrinogen oxidase, chloroplastic-like 4327918 OSNPB_010286600 6.7 6.8
 6.7
 3.8
 6.1
 6.2
 4.8
 2.8
2.2
 1.5
45 LOC4331942 30S ribosomal protein S10, chloroplastic 4331942 Os03g0196800 6.7 6.4
 7.0





46 LOC4332730 uncharacterized LOC4332730 4332730 Os03g0331600 6.7 6.6
 6.8
 7.2
 5.5
5.1
 6.4
4.9
 7.4
 5.8
 5.5
47 LOC4336951 oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 4336951 OSNPB_040610800 6.6 5.4
 7.8
 5.3
 5.3
 5.3
 5.7
 2.6
 2.9
48 LOC4337539 photosynthetic NDH subunit of lumenal location 5, chloroplastic 4337539 Os05g0103200 6.6 6.7
 6.4
 5.4
 5.0
2.8
 4.3
2.8
 6.3
 3.3
3.0
 3.8
49 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 6.5 6.9
 6.2
 4.2
 7.0
5.1
 6.5
4.3
 4.7
 2.3
1.8
 6.2
50 LOC4337588 uncharacterized protein At5g02240 4337588 Os05g0110300 6.5 4.1
 8.9
 9.4
3.5
 3.1
-0.1
 4.2
0.2
 7.9
 3.3
 2.2
2.1
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