Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4342044   ubiquitin carboxyl-terminal hydrolase MINDY-1 
 osa-r.5   4342044   ubiquitin carboxyl-terminal hydrolase MINDY-1 
 osa-m.8   4342044   ubiquitin carboxyl-terminal hydrolase MINDY-1 
 ath-u.4   AT4G11860   FAM63A-like protein (DUF544) 
 gma-u.4   100797239   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 gma-u.4   100808340   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 sly-u.4   101249947   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 ppo-u.4   7490923   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 ppo-u.4   7479246   ubiquitin carboxyl-terminal hydrolase MINDY-1 
 mtr-u.4   11437518   ubiquitin carboxyl-terminal hydrolase MINDY-1 

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Top 50 coexpressed genes to 4342044 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4141   Protein processing in endoplasmic reticulum  3 191 3.16
 osa4144   Endocytosis  3 144 2.46
 osa3050   Proteasome  2 62 2.12
 osa10   Glycolysis / Gluconeogenesis  1 143 -
 osa4120   Ubiquitin mediated proteolysis  2 149 -

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osa:LOC4342044 (ubiquitin carboxyl-terminal hydrolase MINDY-1) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4342044
osa-r.5
for
4342044
osa-m.8
for
4342044
ath-u.4
for
AT4G11860
gma-u.4
for
100797239
gma-u.4
for
100808340
sly-u.4
for
101249947
ppo-u.4
for
7490923
ppo-u.4
for
7479246
mtr-u.4
for
11437518
1 LOC4333165 probable ubiquitin conjugation factor E4 4333165 Os03g0428000 5.6 6.0
 5.2
 3.1
 3.4
2.3
 4.4
2.1
 2.2
 3.9
1.4
 2.1
1.1
 5.6
2 LOC4336893 dual specificity protein kinase YAK1 homolog 4336893 Os04g0602800 5.1 5.9
 4.3
 3.3
 3.0
1.3
 3.4
1.9
 2.5
 3.2
2.4
 1.1
0.9
 2.6
3 LOC4329056 uncharacterized LOC4329056 4329056 Os02g0290300 4.9 4.3
 5.5
 3.4
2.5
 3.3
2.7
 3.0
2.5
 3.2
1.8
 4.2
3.2
 1.5
1.3
 5.3
2.3
4 LOC4341328 probable phospholipid-transporting ATPase 4 4341328 Os06g0565900 4.9 5.7
 4.0
 0.8
0.6
 1.7
1.3
 1.2
1.0
 2.4
0.8
 2.1
0.6
 0.8
0.0
 4.9
0.7
5 LOC4329059 dipeptidyl aminopeptidase 4 4329059 Os02g0290600 4.8 3.4
 6.2
 2.9
 1.7
1.6
 1.4
1.3
 3.1
 1.9
-0.2
 1.0
1.0
 3.1
6 LOC4337764 putative E3 ubiquitin-protein ligase RF298 4337764 Os05g0141500 4.8 4.6
 5.0
 1.5
1.2
 5.2
4.3
 2.9
2.7
 3.6
1.6
 1.5
0.9
 2.6
0.8
 3.7
0.4
7 LOC4339268 TNF receptor-associated factor homolog 1a 4339268 Os05g0508700 4.5 5.0
 4.1






8 LOC9267935 protein HUA2-LIKE 2 9267935 Os03g0358000 4.5 5.7
 3.4
 2.3
0.4
 3.1
2.4
 2.8
2.0
 2.7
 2.0
 0.3
 2.4
2.1
9 LOC4337547 vacuolar sorting protein 3 4337547 Os05g0104100 4.5 4.4
 4.6
 1.6
 2.7
1.6
 1.3
-0.2
 2.4
 2.5
2.2
 1.0
1.0
 3.4
10 LOC9267157 protein SPIRRIG 9267157 Os03g0744675 4.4 5.3
 3.6
 2.1
0.1
 4.3
3.4
 3.5
3.0
 1.8
 2.2
2.0
 0.8
0.6
 4.2
11 LOC4339861 protein transport protein SEC16B homolog 4339861 Os06g0105600 4.4 4.4
 4.4
 2.9
0.1
 4.7
4.2
 4.7
3.7
 2.0
1.9
 2.1
2.1
 1.1
1.0
 5.5
3.6
12 LOC4338792 probable mediator of RNA polymerase II transcription subunit 26b 4338792 Os05g0414100 4.3 4.0
 4.7
 1.9
1.2
 2.2
0.9
 0.8
-0.0
 0.4
0.1
 1.3
0.4
 0.3
-0.4
 1.6
13 LOC4328514 ubiquitin fusion degradation protein 1 homolog 4328514 Os02g0181800 4.3 3.6
 4.9
 2.3
1.8
 2.0
1.7
 1.6
1.0
 3.8
 2.5
1.8
 0.7
0.1
 1.8
14 LOC4352459 auxilin-related protein 1 4352459 Os12g0548200 4.3 4.9
 3.6
 2.2
2.0
 2.9
2.8
 3.4
3.1
 2.8
1.5
 2.9
2.9
 1.7
1.4
 5.4
5.3
15 LOC4330444 dual specificity protein kinase YAK1 homolog 4330444 Os02g0702500 4.3 5.0
 3.5
 3.3
 3.0
1.3
 3.4
1.9
 2.5
 3.2
2.4
 1.1
0.9
 2.6
16 LOC4350860 uncharacterized LOC4350860 4350860 Os11g0600700 4.2 3.6
 4.8
 2.9
1.5
 3.1
1.0
 1.1
1.0
 1.2
0.9
 2.2
2.1
 0.2
0.1
 3.6
1.5
17 LOC4326322 probable E3 ubiquitin-protein ligase ZFP1 4326322 Os01g0667700 4.2 4.1
 4.3
 5.2
5.0
 4.5
2.7
 3.6
2.7
 3.5
3.2
 1.6
1.3
 1.5
1.4
 5.2
18 LOC4351205 vacuolar protein sorting-associated protein 2 homolog 1 4351205 Os11g0703400 4.2 4.2
 4.1
 1.8
 1.0
0.6
 0.4
-0.3
 2.4
 1.6
1.4
 1.2
-0.2
 1.9
0.2
19 LOC4329647 uncharacterized LOC4329647 4329647 Os02g0554000 4.2 4.1
 4.2
 1.4
 2.4
2.0
 2.8
1.6
 2.5
0.1
 3.1
2.3
 1.3
-0.2
 6.0
20 LOC4337370 uncharacterized protein At2g24330 4337370 Os04g0672900 4.1 2.6
 5.6






21 LOC4348999 vacuolar-sorting protein BRO1 4348999 Os10g0495300 4.1 2.3
 5.9
 3.8
 3.7
2.1
 2.7
2.6
 4.8
1.2
 1.7
1.2
 2.4
2.1
 4.5
22 LOC9266599 ABC transporter F family member 3 9266599 Os02g0826500 4.1 5.3
 2.8
 0.9
 0.5
0.4
 1.4
0.5
 1.6
 1.4
 0.7
 2.6
23 LOC4325661 serine/threonine-protein kinase tricorner 4325661 Os01g0186700 4.0 3.8
 4.2
 1.4
-0.3
 2.3
1.6
 1.4
1.1
 4.2
-1.4
 1.6
0.3
 1.0
0.1
 3.0
24 LOC4344491 uncharacterized LOC4344491 4344491 Os08g0112500 4.0 5.5
 2.5






25 LOC4338502 uncharacterized LOC4338502 4338502 Os05g0350700 4.0 4.6
 3.4
 2.3
0.2
 3.0
2.4
 1.6
1.2
 3.5
 2.2
0.7
 1.7
1.2
 5.0
4.5
26 LOC4329463 serine/threonine-protein kinase PBS1 4329463 Os02g0513000 4.0 3.9
 4.1
 2.9
1.3
 1.7
1.7
 2.6
1.3
 2.8
1.9
 1.6
1.5
 2.5
2.2
 4.0
1.3
27 LOC4337984 heat shock 70 kDa protein 15 4337984 Os05g0181000 4.0 3.8
 4.2
 1.6
 2.1
0.1
 2.4
1.2
 1.8
1.3
 2.1
-0.2
 -0.2
-0.9
 1.6
0.6
28 LOC4325212 E3 ubiquitin-protein ligase PRT6 4325212 Os01g0148050 4.0 4.1
 3.8
 3.5
 5.3
2.6
 3.9
1.0
 2.0
1.0
 2.0
 1.3
 7.0
29 TPR3 protein TPR3-like 4332285 Os03g0254700 4.0 5.3
 2.6
 3.4
3.4
 2.5
1.9
 2.1
2.0
 3.4
1.3
 2.9
2.8
 2.0
1.6
 5.5
3.1
30 LOC4326314 protein ROOT HAIR DEFECTIVE 3-like 4326314 OSNPB_010575000 3.9 2.6
 5.2
 1.5
0.8
 1.6
1.5
 1.8
1.8
 1.8
0.9
 1.8
1.6
 2.3
1.8
 2.1
0.9
31 LOC4346522 E3 ubiquitin-protein ligase UPL1 4346522 Os09g0252800 3.9 3.6
 4.3
 1.2
1.2
 4.1
3.4
 3.6
2.9
 1.8
 2.6
1.6
 0.5
-0.1
 4.3
3.7
32 LOC4329846 protein NBR1 homolog 4329846 Os02g0593700 3.9 3.4
 4.5
 2.4
 2.5
1.4
 3.9
3.5
 2.9
2.4
 1.9
0.4
 1.6
1.1
 2.5
33 LOC4342515 casein kinase 1-like protein HD16 4342515 Os07g0171300 3.9 4.2
 3.6
 4.2
3.3
 3.5
3.1
 4.2
3.8
 3.6
1.6
 3.4
3.3
 2.7
1.9
 5.2
4.8
34 LOC4334364 nuclear pore complex protein NUP1-like 4334364 3.9 5.1
 2.6
 0.3
-0.4
 1.2
-0.2
 0.3
-0.5
 2.2
1.5
 0.4
0.1
 1.2
0.1
 3.0
0.8
35 LOC4328955 uncharacterized LOC4328955 4328955 Os02g0265700 3.9 4.5
 3.2
 2.1
 1.5
0.8
 1.4
1.1
 1.9
 2.6
2.2
 1.8
1.2
 2.9
36 LOC4334150 uncharacterized LOC4334150 4334150 3.9 3.7
 4.0
 2.2
 1.2
1.0
 0.7
-0.0
 0.4
 0.7
0.1
 0.6
0.5
 1.6
37 LOC4349021 mediator of RNA polymerase II transcription subunit 16 4349021 Os10g0498700 3.9 4.6
 3.1
 0.5
 3.6
2.2
 1.2
0.3
 1.2
 2.1
1.8
 1.4
-0.0
 2.9
38 LOC4334354 cullin-4 4334354 Os03g0786800 3.9 4.3
 3.4
 2.8
 2.0
1.7
 1.1
1.0
 3.8
0.9
 2.8
2.7
 2.3
1.7
 3.0
39 LOC4325909 serine/threonine-protein kinase EDR1 4325909 Os01g0674100 3.9 3.6
 4.1
 2.1
-1.3
 0.6
-0.4
 0.3
-0.2
 0.4
-0.7
 2.0
1.4
 1.2
1.1
 4.8
1.9
40 LOC4324379 26S proteasome non-ATPase regulatory subunit 14 homolog 4324379 Os01g0267200 3.8 4.5
 3.2
 0.9
 1.4
0.6
 2.6
1.7
 2.6
 2.1
1.7
 -1.0
-1.1
 2.3
0.1
41 LOC4340644 dynamin-2B 4340644 Os06g0247800 3.8 4.1
 3.6
 3.8
3.1
 2.8
2.1
 2.3
1.5
 2.4
0.5
 3.5
1.8
 1.5
0.9
 2.8
2.3
42 LOC4342546 protein LIFEGUARD 4 4342546 Os07g0177300 3.8 4.5
 3.1
 0.5
0.5
 1.7
1.2
 2.2
0.6
 1.8
1.7
 -0.9
-2.4
 0.4
-0.7
 2.2
0.3
43 LOC4352428 golgin candidate 6 4352428 Os12g0538900 3.8 3.2
 4.3
 4.4
 3.7
2.4
 2.3
0.7
 3.5
 2.2
 1.4
 3.3
44 LOC4339859 dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial 4339859 Os06g0105400 3.7 3.8
 3.7
 0.8
-1.4
 -0.2
-0.4
 0.1
-0.0
 0.4
 2.1
1.5
 0.5
-0.6
 -0.3
45 LOC4340828 proteasome activator subunit 4 4340828 Os06g0301300 3.7 5.1
 2.4
 1.6
 3.0
3.0
 6.5
2.4
 3.9
 2.0
1.4
 0.8
-1.0
 3.4
46 LOC4327781 transcription factor bHLH13 4327781 Os01g0235700 3.7 2.9
 4.4
 1.6
0.6
 0.8
-0.4
 0.9
-0.5
 -0.3
-0.3
 1.1
0.6
 0.3
-0.0
 3.7
2.2
47 LOC4344707 stomatin-like protein 2, mitochondrial 4344707 Os08g0158500 3.6 3.4
 3.8
 0.5
0.2
 -0.8
 0.9
 1.1
 -0.3
-0.6
 1.2
1.0
 0.2
48 LOC4334998 protein transport protein Sec24-like At3g07100 4334998 Os04g0129500 3.6 4.1
 3.2
 2.7
 0.9
0.8
 2.5
0.6
 1.4
 2.5
2.4
 1.4
1.4
 3.1
49 LOC4349830 exocyst complex component EXO70A1 4349830 Os11g0157400 3.6 3.3
 3.9
 2.7
 2.2
2.0
 1.5
1.5
 4.4
0.9
 2.5
2.3
 1.5
1.2
 5.0
-0.2
50 LOC4352242 ubiquitin carboxyl-terminal hydrolase 12 4352242 Os12g0489200 3.6 4.8
 2.4






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