Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4342473   uncharacterized LOC4342473 
 osa-r.5   4342473   uncharacterized LOC4342473 
 osa-m.8   4342473   uncharacterized LOC4342473 
 ath-u.4   CRR42   DUF3148 family protein 
 gma-u.4   100778186   uncharacterized LOC100778186 
 gma-u.4   100305889   uncharacterized LOC100305889 
 sly-u.4   101249750   uncharacterized LOC101249750 
 ppo-u.4   7460107   uncharacterized LOC7460107 
 mtr-u.4   11442196   uncharacterized LOC11442196 

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Top 50 coexpressed genes to 4342473 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa1240   Biosynthesis of cofactors  4 233 2.84
 osa860   Porphyrin metabolism  3 42 4.02
 osa970   Aminoacyl-tRNA biosynthesis  2 70 2.02
 osa61   Fatty acid biosynthesis  1 47 -
 osa3010   Ribosome  3 353 -

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osa:LOC4342473 (uncharacterized LOC4342473) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4342473
osa-r.5
for
4342473
osa-m.8
for
4342473
ath-u.4
for
CRR42
gma-u.4
for
100778186
gma-u.4
for
100305889
sly-u.4
for
101249750
ppo-u.4
for
7460107
mtr-u.4
for
11442196
1 LOC4334100 photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 4334100 Os03g0747700 5.0 5.1
 5.0
 2.7
 3.2
1.8
 3.8
1.1
 2.4
 0.7
 1.2
2 LOC4340929 uncharacterized LOC4340929 4340929 Os06g0332800 4.7 4.6
 4.8
 1.8
 2.6
2.5
 3.9
2.6
 1.1
 2.3
0.7
 0.8
3 LOC4346032 transcription termination factor MTERF6, chloroplastic/mitochondrial 4346032 Os08g0515800 4.6 5.4
 3.8
 1.2
 0.8
0.4
 1.9
1.3
 0.8
 0.9
 1.8
4 LOC4335962 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic 4335962 Os04g0445700 4.6 6.0
 3.1
 -1.0
 -0.8
-0.9
 -1.6
-2.0
 -0.1
-0.2
 0.3
-0.3
 -0.4
-1.2
5 LOC4330964 uncharacterized LOC4330964 4330964 Os02g0788500 4.5 4.7
 4.2
 2.8
 0.7
0.3
 -0.5
-0.6
 0.1
 0.3
-0.4
 0.9
6 LOC4328965 chloroplast processing peptidase 4328965 Os02g0267000 4.4 4.2
 4.5
 1.8
 1.9
1.3
 3.1
2.3
 -0.1
 0.8
0.6
 0.9
7 wsl4 white stripe leaf4 4329703 Os02g0565400 4.3 3.8
 4.8





8 LOC4331815 ylmG homolog protein 2, chloroplastic 4331815 Os03g0178200 4.2 4.1
 4.4
 1.2
 0.7
-0.4
 1.7
1.1
 2.6
 1.9
 2.1
9 LOC4345856 dicarboxylate transporter 2.1, chloroplastic 4345856 Os08g0481800 4.1 3.1
 5.1
 1.6
-0.8
 -0.5
-0.8
 0.4
-1.0
 0.3
-1.1
 0.8
0.4
 1.2
10 LOC4346938 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic 4346938 OSNPB_090382400 4.0 4.7
 3.4
 0.7
 2.1
 1.5
 1.3
 0.4
 1.1
11 LOC4324565 peptide deformylase 1A, chloroplastic-like 4324565 OSNPB_010555800 4.0 4.7
 3.3
 -0.6
 0.7
 3.6
 1.5
 0.5
 0.9
-0.2
12 ASL2 Albino Seedling Lethal2 4328932 Os02g0259600 4.0 5.1
 2.8
 -0.1
 0.3
-0.2
 2.6
2.3
 1.8
 1.5
1.5
 1.6
13 LOC4342518 pentatricopeptide repeat-containing protein At5g03800 4342518 Os07g0172800 3.9 5.8
-0.3
 -0.2
 0.6
 0.9
 0.5
 0.1
14 LOC4341766 peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic 4341766 Os06g0663800 3.9 3.8
 4.0
 3.8
 0.7
 3.0
 1.4
 1.0
 0.7
15 LOC4334632 transcription termination/antitermination protein NusG 4334632 Os03g0825500 3.9 4.2
 3.5
 1.7
 2.7
 2.8
 1.0
 2.3
 0.2
16 LOC4339930 uncharacterized LOC4339930 4339930 Os06g0116400 3.9 4.3
 3.4
 -0.1
-1.4
 -0.6
-0.7
 -0.0
-0.2
 0.2
0.2
 0.9
-0.0
 0.7
17 LOC4350706 50S ribosomal protein 6, chloroplastic 4350706 Os11g0550800 3.8 5.6
 2.0
 1.3
 0.8
 3.4
 1.0
 1.5
 1.7
18 LOC4345098 glutamyl-tRNA reductase-binding protein, chloroplastic 4345098 Os08g0254900 3.8 3.2
 4.3
 -0.5
 2.3
 2.3
 -0.6
 0.2
 2.2
19 LOC4331249 large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic 4331249 Os02g0831200 3.8 3.3
 4.2
 0.4
 2.0
 2.4
 0.5
 2.2
 1.2
20 LOC4352408 phenylalanine--tRNA ligase, chloroplastic/mitochondrial 4352408 Os12g0533700 3.7 2.9
 4.6
 0.2
 1.7
1.0
 2.8
1.3
 -0.6
 -0.5
 1.0
21 wgl2 white green leaf2 4334247 Os03g0769100 3.7 4.1
 3.3
 -0.3
 1.4
1.4
 2.1
1.8
 0.2
 3.5
2.0
 2.2
22 LOC4346004 uncharacterized LOC4346004 4346004 Os08g0510800 3.7 4.9
 2.5
 2.0
 0.8
0.4
 0.4
-0.8
 -0.3
 0.6
-0.3
 -0.1
23 LOC4332243 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 4332243 Os03g0247000 3.6 3.6
 3.7
 0.7
0.1
 1.3
0.8
 1.5
0.5
 -0.1
-0.2
 1.9
0.6
 1.5
1.1
24 LOC4336056 30S ribosomal protein 3, chloroplastic 4336056 Os04g0461100 3.6 4.1
 3.1
 2.7
1.5
 0.2
 3.2
 4.0
0.8
 5.2
1.0
 1.6
25 LOC4331057 uncharacterized LOC4331057 4331057 Os02g0804400 3.6 3.5
 3.7
 3.9
 2.0
 3.4
 2.8
 0.3
 0.4
26 LOC4328432 porphobilinogen deaminase, chloroplastic-like 4328432 OSNPB_020168800 3.6 4.1
 3.1
 -0.8
 1.2
0.8
 1.3
1.3
 -0.6
 0.9
-0.4
 2.6
27 LOC4351293 uncharacterized LOC4351293 4351293 Os12g0110400 3.6 3.4
 3.8
 0.3
 0.3
0.1
 -0.4
-0.7
 1.0
 0.1
 1.2
28 LOC4331268 uncharacterized LOC4331268 4331268 Os02g0833400 3.6 3.8
 3.3
 0.5
 1.6
1.1
 2.0
1.3
 -0.3
 0.5
0.4
 0.1
29 LOC4326635 uroporphyrinogen decarboxylase 1, chloroplastic-like 4326635 OSNPB_010622300 3.6 4.1
 3.0
 -0.3
 1.9
1.7
 1.7
0.8
 0.7
 0.6
 3.0
30 wsl6 white stripe leaf6 9271571 OSNPB_050567300 3.5 3.6
 3.4
 1.0
 2.8
0.2
 2.2
0.4
 0.2
 0.0
 1.4
31 LOC4337135 uncharacterized LOC4337135 4337135 Os04g0635700 3.5 3.0
 4.0
 5.3
 1.7
1.0
 2.9
2.6
 5.9
 3.8
0.9
 2.1
32 LOC4338161 lactoylglutathione lyase GLX1 4338161 Os05g0230900 3.5 3.9
 3.2
 1.1
-1.5
 1.5
1.3
 2.4
2.1
 0.4
0.2
 0.4
-0.2
 1.4
1.4
33 LOC4350441 RNA polymerase sigma factor sigB 4350441 Os11g0448400 3.5 4.6
 2.4
 2.3
 1.1
0.4
 3.3
3.0
 0.3
 2.2
0.5
 1.8
34 LOC4343973 15-cis-phytoene desaturase, chloroplastic/chromoplastic 4343973 Os07g0626800 3.5 3.2
 3.8
 2.1
 -1.0
 1.0
 0.3
 2.8
 1.3
35 LOC4351767 uncharacterized protein ycf45 4351767 Os12g0209000 3.5 3.6
 3.4
 0.2
 -0.2
 0.4
 0.1
1.2
36 LOC4344681 O-methyltransferase MdmC 4344681 Os08g0154000 3.5 4.8
0.5
-0.4
 0.5
 1.0
 0.0
 -1.5
 1.7
37 LOC4349098 uncharacterized LOC4349098 4349098 Os10g0512500 3.4 4.6
 2.3
 -0.3
 3.2
 4.3
 2.0
 0.5
 1.7
38 LOC4331119 cytochrome c1 2, heme protein, mitochondrial 4331119 Os02g0814400 3.4 4.7
 2.1





39 LOC4340015 magnesium protoporphyrin IX methyltransferase, chloroplastic 4340015 Os06g0132400 3.4 3.8
 3.0
 0.3
 1.7
-0.2
 2.6
0.3
 1.7
 0.5
 2.0
40 LOC4352413 acyl carrier protein 1, chloroplastic 4352413 Os12g0534200 3.4 1.9
 4.9
 -0.2
-0.3
 0.8
0.7
 1.9
1.5
 3.3
0.5
 2.7
1.0
 2.5
-0.7
41 LOC4330767 histidine--tRNA ligase, chloroplastic/mitochondrial 4330767 Os02g0754700 3.4 3.3
 3.5
 0.2
-0.1
 0.9
 3.0
 -0.5
 -0.2
 -0.5
42 LOC4331439 nascent polypeptide-associated complex subunit alpha-like protein 1 4331439 Os03g0121700 3.4 3.5
 3.3
 0.5
0.3
 1.0
0.7
 0.1
-1.2
 0.3
-0.7
 0.6
0.5
 0.2
-0.1
43 LOC4344492 uncharacterized LOC4344492 4344492 Os08g0112600 3.4 3.4
 3.3
 1.5
 0.3
 1.4
 2.4
 1.1
 1.9
44 LOC4352460 nucleoside diphosphate kinase 2, chloroplastic 4352460 Os12g0548300 3.3 2.8
 3.9
 0.2
 0.9
-0.7
 1.7
0.5
 1.1
0.6
 -0.0
 2.1
45 LOC9269424 uncharacterized LOC9269424 9269424 Os08g0345400 3.3 3.1
 3.6
 0.2
 1.6
0.6
 2.4
2.1
 1.4
 0.0
 1.4
46 LOC4331459 50S ribosomal protein L5, chloroplastic-like 4331459 OSNPB_030125000 3.3 5.4
 1.2
 -0.8
 2.1
0.1
 3.6
3.0
 0.9
 1.8
0.7
 2.6
47 LOC4348548 uncharacterized LOC4348548 4348548 Os10g0395200 3.3 3.5
 3.1
 2.2
 2.1
2.1
 4.9
4.3
 1.4
 1.3
0.3
 1.2
48 LOC4338540 S-adenosylmethionine carrier 1, chloroplastic/mitochondrial 4338540 Os05g0361900 3.3 3.1
 3.5
 -1.0
-1.3
 1.6
0.7
 2.0
1.3
 0.1
-0.9
 0.9
0.3
 1.4
-0.0
49 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 3.3 3.3
 3.3
 0.8
 0.9
0.7
 2.6
0.7
 0.1
 0.8
 1.5
50 LOC4328094 pentatricopeptide repeat-containing protein At2g01860 4328094 Os02g0118000

-0.9
 1.0
1.0
 1.5
0.5
 -0.2
 0.6
 0.9
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