Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4342588   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 osa-r.5   4342588   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 osa-m.8   4342588   protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic 
 ath-u.4   YLMG1-2   YGGT family protein 
 ath-u.4   YLMG1-1   YGGT family protein 
 gma-u.4   100819562   ylmG homolog protein 1-2, chloroplastic 
 gma-u.4   100500209   YGGT domain-containing protein 
 sly-u.4   101255803   ylmG homolog protein 1-2, chloroplastic 
 ppo-u.4   7459515   ylmG homolog protein 1-2, chloroplastic 
 mtr-u.4   25491180   ylmG homolog protein 1-2, chloroplastic 

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Top 50 coexpressed genes to 4342588 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa970   Aminoacyl-tRNA biosynthesis  2 70 2.02
 osa220   Arginine biosynthesis  1 36 -
 osa230   Purine metabolism  1 91 -
 osa4141   Protein processing in endoplasmic reticulum  2 224 -
 osa1230   Biosynthesis of amino acids  2 234 -

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osa:LOC4342588 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4342588
osa-r.5
for
4342588
osa-m.8
for
4342588
ath-u.4
for
YLMG1-2
ath-u.4
for
YLMG1-1
gma-u.4
for
100819562
gma-u.4
for
100500209
sly-u.4
for
101255803
ppo-u.4
for
7459515
mtr-u.4
for
25491180
1 LOC4349426 10 kDa chaperonin 1, chloroplastic 4349426 Os10g0566700 7.3 8.8
 5.9
 0.3
-1.3
 4.1
3.2
 2.5
2.4
 2.2
1.4
 5.7
 3.6
1.0
 4.3
2 LOC4332127 uncharacterized LOC4332127 4332127 Os03g0226700 7.1 7.1
 7.1
 0.5
 4.6
 7.3
5.6
 8.3
4.6
 2.2
 3.0
 1.8
3 LOC4345098 glutamyl-tRNA reductase-binding protein, chloroplastic 4345098 Os08g0254900 6.7 5.5
 7.9
 0.6
 3.3
 3.6
 4.2
 5.6
 4.5
 2.0
4 LOC4330260 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic 4330260 Os02g0668100 6.6 6.8
 6.4
 5.5
 2.9
 5.7
 5.4
 2.7
 2.3
 4.8
5 LOC4331268 uncharacterized LOC4331268 4331268 Os02g0833400 6.5 6.4
 6.6
 1.3
 4.1
 4.6
4.3
 5.8
4.4
 5.9
 2.5
1.4
 2.8
6 LOC4331058 chaperone protein DnaJ 4331058 Os02g0804500 6.3 5.9
 6.6
 1.9
 3.6
 1.7
 1.0
 4.3
 3.2
 2.1
7 LOC4338354 stromal 70 kDa heat shock-related protein, chloroplastic 4338354 Os05g0303000 6.1 7.6
 4.6
 0.1
-0.6
 5.5
3.5
 6.8
5.8
 6.6
4.9
 4.7
-1.0
 3.0
2.8
 3.6
8 LOC4329960 protein GrpE 4329960 Os02g0612000 6.1 8.6
 3.6
 -0.1
 4.1
 6.2
4.9
 4.7
4.7
 6.8
 6.9
 4.2
9 LOC4332811 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic 4332811 Os03g0344900 5.9 3.4
 8.5
 5.0
 4.5
 5.2
 4.4
 5.0
 2.8
 5.2
10 LOC9268343 uncharacterized protein At3g52155, chloroplastic 9268343 Os09g0287300 5.7 5.7
 5.6
 4.1
 2.3
 2.1
1.3
 3.1
0.7
 0.6
 2.0
2.0
 3.9
11 LOC4332243 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 4332243 Os03g0247000 5.6 4.7
 6.6
 2.9
2.3
 4.5
3.0
 6.0
5.8
 6.0
5.8
 6.4
5.6
 2.7
2.4
 2.0
1.6
12 LOC4332739 ABC transporter I family member 6, chloroplastic 4332739 Os03g0332700 5.5 6.4
 4.7
 3.4
 4.8
 4.4
2.8
 4.9
2.8
 8.0
 2.8
 3.2
13 LOC4351976 ruBisCO large subunit-binding protein subunit alpha, chloroplastic 4351976 Os12g0277500 5.2 6.4
 4.1
 -0.0
-0.5
 7.7
3.5
 4.6
4.2
 4.0
2.8
 4.9
1.2
 4.8
3.9
 3.4
1.8
14 LOC4346577 sufE-like protein 1, chloroplastic/mitochondrial 4346577 Os09g0270900 5.2 5.5
 5.0

6.9
 5.2
 5.6
 2.8
2.0
 5.1
15 LOC4328965 chloroplast processing peptidase 4328965 Os02g0267000 5.1 5.2
 5.1
 0.9
 2.7
 6.8
4.2
 5.5
3.5
 5.0
 3.4
3.1
 2.5
16 LOC4325986 protein ABCI7, chloroplastic 4325986 Os01g0127300 5.1 3.5
 6.7
 2.7
 4.0
 7.7
 7.7
 3.6
 1.7
0.8
 3.0
17 LOC4344398 uncharacterized LOC4344398 4344398 Os07g0694800 5.1 4.1
 6.0
 1.7
 0.5
 2.8
 3.2
 1.9
 2.5
1.0
 0.6
18 LOC4329578 2-Cys peroxiredoxin BAS1, chloroplastic-like 4329578 OSNPB_020537700 5.0 4.8
 5.3
 0.7
0.2
 4.8
4.0
 5.4
5.3
 6.1
4.0
 4.5
3.5
 6.7
4.8
 2.6
2.5
19 LOC4338452 chaperone protein dnaJ A7A, chloroplastic-like 4338452 OSNPB_050334400 5.0 5.1
 4.9
 0.9
-0.3
 2.6
1.7
 3.6
2.4
 2.0
1.8
 4.0
 4.2
1.8
 6.2
20 LOC4339910 ruBisCO large subunit-binding protein subunit beta, chloroplastic 4339910 Os06g0114000 4.9 5.7
 4.1
 0.0
-0.9
 5.5
3.7
 4.8
4.1
 3.7
3.5
 6.7
4.4
 4.9
4.3
 4.2
2.6
21 LOC4331318 UPF0187 protein At3g61320, chloroplastic 4331318 Os03g0106000 4.9 4.9
 4.9
 3.1
1.3
 1.7
0.4
 2.2
1.7
 1.8
0.9
 2.7
 0.6
 0.1
22 LOC9269420 monothiol glutaredoxin-S10-like 9269420 OSNPB_080565800 4.9 3.7
 6.0
 0.6
 0.3
 3.5
0.7
 4.1
2.3
 3.1
 5.3
 2.0
23 LOC4324152 GTP-binding protein At2g22870 4324152 Os01g0732200 4.8 4.0
 5.7
 0.0
 3.4
 5.8
2.1
 4.6
2.4
 3.5
 1.8
0.9
 2.0
24 LOC4346468 protein CLMP1 4346468 Os09g0135400 4.7 3.3
 6.1
 -0.1
 2.3
 2.6
2.6
 2.8
2.0
 5.5
5.1
 0.6
0.5
 1.7
25 LOC4350829 CDK5RAP1-like protein 4350829 OSNPB_110592800 4.7 4.0
 5.4
 0.5
 3.7
 3.7
2.9
 3.2
2.6
 3.7
 3.1
 2.4
26 LOC4339764 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 4339764 Os05g0587200 4.7 3.0
 6.4
 -1.3
 2.6
 3.5
1.6
 3.1
1.3
 4.8
 1.4
 1.4
27 LOC4350906 serine--tRNA ligase, chloroplastic/mitochondrial 4350906 Os11g0610900 4.6 4.0
 5.2
 0.4
 6.8
 2.1
 1.2
 4.9
 2.8
 1.1
28 LOC9267931 translation initiation factor IF-2 9267931 Os02g0664700 4.6 4.4
 4.8
 1.9
 0.2
 1.0
 0.2
 -0.8
 1.9
1.0
 1.4
29 LOC4335871 protein GrpE 4335871 Os04g0431100 4.6 4.9
 4.2
 0.3
 3.8
 2.2
 2.2
 1.0
 4.5
 2.3
30 LOC4340394 20 kDa chaperonin, chloroplastic 4340394 Os06g0197575 4.5 6.0
-0.5
 6.8
 4.6
4.2
 4.9
3.3
 6.1
3.5
 4.5
2.7
 5.5
3.9
31 LOC4344347 rhodanese-like/PpiC domain-containing protein 12, chloroplastic 4344347 Os07g0687500 4.5 3.5
 5.4
 1.6
 3.7
 2.2
 2.3
 6.9
 3.2
 3.5
32 LOC4351647 monothiol glutaredoxin-S12, chloroplastic-like 4351647 OSNPB_120175500 4.4 3.4
 5.5
 3.6
 6.6
 5.2
3.6
 5.0
3.0
 5.3
 6.5
 2.9
33 LOC4332674 guanylate kinase 2, chloroplastic/mitochondrial-like 4332674 OSNPB_030320900 4.4 5.1
 3.7
 3.0
 3.4
 2.4
 2.9
 1.9
 2.0
1.6
 2.6
34 LOC4347356 heat shock protein 90-5, chloroplastic 4347356 Os09g0474300 4.4 5.0
 3.8
 -0.8
 4.5
 2.4
2.4
 1.9
1.8
 5.1
 4.4
3.0
 3.1
35 LOC4327912 peptidyl-prolyl cis-trans isomerase A1 4327912 Os01g0284700 4.4 5.2
 3.5
 -1.1
 3.2
 3.1
2.2
 3.2
1.6
2.8
 2.1
1.1
36 LOC4333161 chaperone protein ClpB2, chloroplastic-like 4333161 OSNPB_030426900 4.3 5.4
 3.3
 1.4
0.4
 0.6
0.5
 2.1
1.6
 3.0
2.9
 -0.8
 1.3
1.0
 2.7
1.9
37 LOC4339930 uncharacterized LOC4339930 4339930 Os06g0116400 4.3 3.5
 5.1
 1.2
-0.1
 3.9
1.9
 4.2
3.1
 4.1
3.7
 3.7
2.5
 1.7
1.6
 1.2
38 LOC4336607 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like 4336607 4.3 4.6
 4.0
 2.1
 2.3
 1.6
0.6
 1.3
0.7
 3.6
 0.5
0.5
 2.3
39 LOC4343643 protein TIC 20-I, chloroplastic 4343643 Os07g0568500 4.3 4.5
 4.1

4.5
4.4
 4.1
3.1
 4.7
2.8
 2.7
2.2
 3.4
40 LOC4336463 uncharacterized LOC4336463 4336463 Os04g0527800 4.3 4.8
 3.7
 2.9
 4.1
 3.9
3.0
 4.8
2.8
 7.5
 2.7
 3.0
41 LOC4331942 30S ribosomal protein S10, chloroplastic 4331942 Os03g0196800 4.3 3.4
 5.2






42 LOC4351999 cysteine desulfurase 1, chloroplastic 4351999 Os12g0287300 4.3 3.8
 4.8
 1.5
 2.9
 3.5
2.2
 3.5
2.8
 2.2
 4.6
 2.0
43 LOC4336590 acetylglutamate kinase 4336590 Os04g0550500 4.2 4.9
 3.6
 1.9
 7.2
 4.8
3.5
 3.8
3.5
 -0.1
 3.9
2.3
 2.8
44 LOC4346941 DEAD-box ATP-dependent RNA helicase 22-like 4346941 OSNPB_090383400 4.2 4.2
 4.2
 0.2
 5.4
 1.6
 0.0
 4.7
 4.5
 1.4
45 LOC4338324 lactoylglutathione lyase 4338324 Os05g0295850 4.2 4.9
 3.5
 3.1
 -0.2
 2.1
0.8
 2.7
2.2
 1.0
 -0.4
 1.2
46 LOC4330767 histidine--tRNA ligase, chloroplastic/mitochondrial 4330767 Os02g0754700 4.2 2.8
 5.6
 -0.4
-1.1
 0.9
-0.7
 3.4
 3.8
 4.3
 1.6
 1.4
47 LOC4352558 diaminopimelate epimerase, chloroplastic-like 4352558 4.2 3.5
 4.8
 1.0
 3.8
 6.2
5.2
 6.3
5.0
 1.7
 5.0
2.6
 1.8
48 LOC4330712 ATPase ARSA1 4330712 Os02g0745000 4.2 5.2
 3.1
 2.6
 2.3
 3.1
2.7
 3.6
2.5
 2.9
0.2
 2.2
0.9
 1.8
49 LOC4351989 protein RETICULATA-RELATED 1, chloroplastic 4351989 Os12g0283800 4.1 3.8
 4.5
 0.9
 2.9
 4.1
3.5
 3.1
2.0
 4.9
4.5
 2.9
1.1
 2.6
50 wsl4 white stripe leaf4 4329703 Os02g0565400 4.1 3.8
 4.5






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