Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4342673   rRNA biogenesis protein RRP5 
 osa-r.5   4342673   rRNA biogenesis protein RRP5 
 osa-m.8   4342673   rRNA biogenesis protein RRP5 
 ath-u.4   AT3G11964   RIBOSOMAL RNA PROCESSING 5 
 gma-u.4   100793149   rRNA biogenesis protein RRP5 
 gma-u.4   100797745   rRNA biogenesis protein RRP5 
 sly-u.4   101261692   rRNA biogenesis protein RRP5 
 ppo-u.4   7488047   rRNA biogenesis protein RRP5 
 mtr-u.4   25483593   rRNA biogenesis protein RRP5 

close


Top 50 coexpressed genes to 4342673 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa3008   Ribosome biogenesis in eukaryotes  10 86 16.62
 osa970   Aminoacyl-tRNA biosynthesis  3 70 3.36
 osa3020   RNA polymerase  2 52 2.27
 osa3440   Homologous recombination  2 54 2.24
 osa3018   RNA degradation  2 112 -

close


osa:LOC4342673 (rRNA biogenesis protein RRP5) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4342673
osa-r.5
for
4342673
osa-m.8
for
4342673
ath-u.4
for
AT3G11964
gma-u.4
for
100793149
gma-u.4
for
100797745
sly-u.4
for
101261692
ppo-u.4
for
7488047
mtr-u.4
for
25483593
1 LOC4351600 nucleolar protein 6 4351600 Os12g0166500 12.4 10.5
 14.2
 15.2
 9.4
8.9
 12.1
10.6
 9.7
 6.2
 9.8
2 LOC4331982 uncharacterized LOC4331982 4331982 Os03g0203100 11.6 8.5
 14.8
 8.2
 9.5
7.6
 9.5
8.4
 11.2
 9.0
 8.3
3 LOC4348797 midasin 4348797 Os10g0456950 11.5 9.1
 13.9
 14.1
 13.4
12.4
 11.6
11.6
 13.9
 7.9
 11.7
4 LOC4336577 uncharacterized protein At3g06530 4336577 Os04g0548300 11.4 10.4
 12.4
 18.6
 14.6
12.5
 15.9
15.7
 15.1
 7.4
 15.3
5 LOC4337062 uncharacterized LOC4337062 4337062 Os04g0625350 11.1 6.0
 16.3
 12.6
 6.4
5.5
 6.2
5.3
 7.9
 6.7
 12.3
6 LOC4329995 polyribonucleotide nucleotidyltransferase 2, mitochondrial-like 4329995 OSNPB_020617700 10.6 9.3
 12.0
 9.2
 6.6
 8.3
 10.5
 6.8
 9.5
7 LOC4331821 tubulin--tyrosine ligase-like protein 12 4331821 Os03g0179000 10.5 8.8
 12.1
 9.6
 4.0
 4.9
 8.7
 3.2
 3.4
8 LOC9269589 uncharacterized LOC9269589 9269589 Os10g0154600 10.1 7.4
 12.7
 3.0
 10.3
 9.2
 6.6
 4.2
 4.9
9 LOC4338325 proline-, glutamic acid- and leucine-rich protein 1 4338325 Os05g0295900 9.7 7.3
 12.1
 8.5
 4.0
3.8
 4.5
3.7
 6.7
 3.2
 7.2
5.8
10 LOC9270304 lon protease homolog, mitochondrial-like 9270304 OSNPB_070689300 9.5 9.2
 9.9
 5.5
 8.7
6.6
 11.1
9.9
 8.6
 5.8
5.4
 9.2
11 LOC4332840 probable nucleolar protein 5-2 4332840 Os03g0350100 9.1 7.3
 11.0
 8.1
7.3
 6.6
5.8
 9.0
8.7
 8.1
4.2
 7.9
5.0
 8.2
7.2
12 LOC4336254 DNA-directed RNA polymerase III subunit 1 4336254 Os04g0492300 9.0 7.6
 10.3
 5.4
 7.2
 5.8
 9.2
 5.2
 8.6
3.5
13 LOC4332841 probable nucleolar protein 5-2 4332841 Os03g0350300 8.7 4.2
 13.3
 8.1
7.3
 6.6
5.8
 9.0
8.7
 8.1
4.2
 7.9
5.0
 8.2
7.2
14 LOC4351627 RNA cytidine acetyltransferase 1 4351627 Os12g0170700 8.6 8.4
 8.7
 12.5
12.0
 11.9
10.4
 14.7
12.9
 10.7
 8.1
5.6
 12.2
15 LOC4336098 uncharacterized LOC4336098 4336098 Os04g0466700 8.6 6.1
 11.0
 5.5
 4.0
3.5
 3.2
2.5
 8.3
 4.6
4.0
 4.6
16 LOC4344865 nucleolin 1-like 4344865 OSNPB_080192900 8.5 6.5
 10.6
 6.3
1.8
 8.6
7.8
 10.8
10.7
 8.4
 6.4
5.7
 9.2
17 LOC4352218 DEAD-box ATP-dependent RNA helicase 28-like 4352218 OSNPB_120481100 8.5 6.8
 10.1
 9.4
 6.7
6.3
 9.0
7.4
 10.1
 10.5
 10.6
18 LOC4331644 WD repeat-containing protein 3 4331644 Os03g0151700 8.4 9.7
 7.1
 12.5
 10.6
5.6
 15.4
8.8
 11.0
 6.9
 10.9
19 LOC4333935 protein ILITYHIA 4333935 Os03g0721200 8.3 8.2
 8.5
 10.1
 5.8
5.1
 5.2
3.8
 6.7
 6.4
 7.6
20 LOC9270399 DNA-directed RNA polymerase I subunit 1 9270399 Os06g0612200 8.3 11.2
16.9
 12.4
 14.3
 15.7
 9.3
 11.7
21 LOC4343142 tetratricopeptide repeat protein 27 homolog 4343142 Os07g0455100 8.3 9.9
 6.7
 7.6
3.0
 8.0
5.7
 10.5
7.4
 9.5
 7.4
 8.6
22 LOC4332851 nucleolar protein 56 4332851 Os03g0352300 8.3 6.1
 10.5
 7.7
5.3
 8.3
7.7
 12.8
11.3
 6.8
 8.6
7.6
 8.3
23 LOC4347787 25S rRNA (cytosine-C(5))-methyltransferase nop2 4347787 Os09g0551300 8.1 6.6
 9.6
 7.9
7.1
 8.2
7.2
 11.5
9.6
 4.6
3.5
 9.2
 10.4
24 LOC4333268 elongation factor G, mitochondrial-like 4333268 OSNPB_030565500 8.0 7.4
 8.7
 6.2
5.1
 10.6
7.1
 12.3
6.4
 7.1
 5.8
3.5
 5.2
25 LOC4337996 glutamine--tRNA ligase 4337996 Os05g0182800 7.9 6.9
 8.9
 6.0
 2.1
2.0
 2.0
1.5
 3.4
 5.0
2.3
 3.8
26 LOC4334546 probable DNA gyrase subunit A, chloroplastic/mitochondrial 4334546 OSNPB_030812000 7.8 4.8
 10.8
 5.5
 6.1
 5.9
 7.8
 4.8
 5.2
27 LOC4336046 NAP1-related protein 1-like 4336046 OSNPB_040459700 7.8 5.1
 10.4





28 LOC4343835 ras GTPase-activating protein-binding protein 2 4343835 Os07g0603100 7.7 6.6
 8.9





29 LOC4326297 something about silencing protein 10 4326297 Os01g0104800 7.7 6.6
 8.8
 8.7
 7.7
3.6
 8.9
4.2
 4.5
1.6
 5.3
 5.9
30 LOC4347343 tRNA (cytosine(34)-C(5))-methyltransferase 4347343 Os09g0471900 7.7 5.5
 9.9
 6.1
5.6
 6.5
1.2
 7.8
0.2
 7.5
5.0
 5.0
 9.6
5.0
31 LOC4332567 WD repeat-containing protein 43 4332567 Os03g0300300 7.7 6.3
 9.0
 9.4
 4.3
1.7
 5.9
1.9
 4.2
 8.5
 7.9
32 LOC4335968 peptidyl-prolyl cis-trans isomerase FKBP53 4335968 Os04g0446500 7.6 6.3
 9.0
 7.5
6.7
 8.0
6.1
 10.6
9.3
 7.2
3.6
 5.8
5.6
 8.1
6.9
33 LOC4345281 GMP synthase [glutamine-hydrolyzing] 4345281 Os08g0326600 7.6 6.8
 8.4
 6.5
 5.6
5.2
 9.5
8.3
 5.7
 5.8
 6.3
34 LOC4331367 uncharacterized LOC4331367 4331367 Os03g0111800 7.5 6.4
 8.7
 4.2
 7.9
 7.4
 5.8
 3.8
 6.7
35 LOC4330930 RRP12-like protein 4330930 Os02g0782100 7.4 6.6
 8.1
 13.7
 7.6
4.4
 9.9
6.0
 8.3
 6.5
 9.5
6.1
36 LOC4352760 WD repeat-containing protein 75 4352760 Os12g0609800 7.3 7.8
 6.9
 9.9
 7.6
4.8
 9.7
7.4
 9.0
 5.3
3.3
 6.3
37 LOC9270208 protein RRP6-like 2 9270208 Os10g0437200 7.3 6.2
 8.4
 7.5
3.3
 4.3
3.8
 4.7
4.6
 2.7
 4.4
4.0
 3.9
3.0
38 LOC4334667 pumilio homolog 24 4334667 Os03g0831100 7.3 6.6
 8.0
 10.9
 4.2
4.0
 6.1
6.0
 8.5
 5.8
4.0
 8.5
39 LOC9270869 isoleucine--tRNA ligase, cytoplasmic 9270869 Os06g0645400 7.3 6.6
 8.0
 5.5
 5.2
4.9
 4.5
4.5
 5.8
 5.2
3.4
 6.9
40 LOC4351580 nucleolar complex protein 2 homolog 4351580 Os12g0163200 7.2 6.5
 7.8
 10.0
 8.4
 12.2
 5.0
 8.7
 7.7
41 LOC4343071 ribosome biogenesis protein BOP1 homolog 4343071 Os07g0435400 7.1 5.5
 8.7
 10.1
 7.7
7.2
 10.2
9.5
 9.4
 6.9
4.1
 11.5
42 LOC4343611 elongator complex protein 1 4343611 Os07g0563700 7.1 6.4
 7.8
 6.5
 5.7
 6.8
 5.5
 5.7
4.3
 5.5
43 LOC4331280 uncharacterized LOC4331280 4331280 Os03g0100500 7.1 7.2
 7.0
 5.5
 6.9
 7.2
 11.5
 5.3
 9.4
44 LOC4329409 DNA repair protein RAD50 4329409 Os02g0497500 7.1 4.7
 9.4
 7.4
 2.8
 1.7
 5.1
 2.1
 2.1
45 LOC4333345 lysine--tRNA ligase-like 4333345 OSNPB_030586800 7.0 4.7
 9.4
 6.5
 3.5
3.3
 4.6
4.6
 5.0
0.1
 6.3
1.5
 6.4
46 LOC4341186 DEAD-box ATP-dependent RNA helicase 31-like 4341186 OSNPB_060526600 7.0 9.1
6.8
4.3
 7.2
5.1
 8.4
6.3
 7.1
 7.8
4.9
 6.3
5.0
47 LOC4325041 DNA repair protein recA homolog 3, mitochondrial 4325041 Os01g0901200 7.0 6.6
 7.4
 4.3
 2.7
1.0
 3.4
1.9
 5.7
 3.4
3.3
 3.5
3.4
48 LOC4337032 nucleolin 2-like 4337032 OSNPB_040620700 7.0 5.9
 8.0
 6.3
1.8
 8.6
7.8
 10.8
10.7
 8.4
 6.4
5.7
 9.2
49 LOC4328251 protein arginine N-methyltransferase 5-like 4328251 OSNPB_020139200 6.9 5.6
 8.2
 7.1
 7.9
6.5
 12.3
8.5
 5.2
 5.6
 8.0
50 LOC4350322 pre-rRNA-processing protein TSR1 homolog 4350322 Os11g0298400 6.8 5.5
 8.2





The preparation time of this page was 1.2 [sec].