Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4342769   transcription elongation factor TFIIS 
 osa-r.5   4342769   transcription elongation factor TFIIS 
 osa-m.8   4342769   transcription elongation factor TFIIS 
 osa-u.4   4334560   transcription elongation factor TFIIS-like 
 ath-u.4   TFIIS   transcript elongation factor IIS 
 gma-u.4   100776046   putative transcription elongation factor S-II-like 
 gma-u.4   100811982   transcription elongation factor TFIIS 
 sly-u.4   101267119   transcription elongation factor TFIIS 
 sly-u.4   101254979   transcription elongation factor TFIIS 
 ppo-u.4   7484632   transcription elongation factor TFIIS 
 ppo-u.4   7472482   transcription elongation factor TFIIS 
 mtr-u.4   25489816   transcription elongation factor TFIIS 

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Top 50 coexpressed genes to 4342769 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa970   Aminoacyl-tRNA biosynthesis  3 70 3.36
 osa61   Fatty acid biosynthesis  1 47 -
 osa240   Pyrimidine metabolism  1 63 -
 osa1230   Biosynthesis of amino acids  2 234 -
 osa1240   Biosynthesis of cofactors  2 248 -

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osa:LOC4342769 (transcription elongation factor TFIIS) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4342769
osa-r.5
for
4342769
osa-m.8
for
4342769
osa-u.4
for
4334560
ath-u.4
for
TFIIS
gma-u.4
for
100776046
gma-u.4
for
100811982
sly-u.4
for
101267119
sly-u.4
for
101254979
ppo-u.4
for
7484632
ppo-u.4
for
7472482
mtr-u.4
for
25489816
1 LOC4341188 probable protein phosphatase 2C 56 4341188 Os06g0526950 4.2 5.0
 3.3
 1.6
1.1
 -0.3
 1.7
0.9
 2.2
1.1
 0.9
 2.5
 1.3
1.2
 -0.4
-0.9
 -0.5
2 LOC4347505 oleoyl-acyl carrier protein thioesterase 1, chloroplastic 4347505 Os09g0505300 3.9 3.5
 4.3
 1.0
 -0.1
-0.2
 0.4
-0.2
 0.1
-0.1
 1.5
 2.3
 -1.2
 0.6
 -1.0
3 LOC4333274 uncharacterized LOC4333274 4333274 Os03g0567100 3.8 5.2
 2.4
 0.9
-0.7
-1.5
 -0.7
-0.9
 -0.9
 -0.3
 -0.3
 0.2
 -0.9
4 LOC4334640 anthranilate synthase alpha subunit 1, chloroplastic-like 4334640 OSNPB_030826500 3.6 3.5
 3.8
 0.8
-0.1
 0.5
-1.3
 2.1
-1.2
 1.5
0.1
 1.1
 0.1
 0.9
-0.1
 -0.2
-0.2
 -0.2
-0.5
5 LOC4330740 pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic-like 4330740 OSNPB_020750400 3.5 4.3
 2.7
 0.6
 0.8
 0.7
0.4
 1.1
0.9
 -0.1
 -1.3
 0.7
 0.2
 -1.2
6 LOC4350330 uncharacterized LOC4350330 4350330 Os11g0302800 3.4 2.5
 4.4
 0.4







7 LOC4333033 probable inactive heme oxygenase 2, chloroplastic 4333033 OSNPB_030395000 3.4 3.9
 3.0
 0.8
 -0.4
 0.7
 -0.2
 0.8
 1.2
 -0.9
 -0.8
 -0.7
8 LOC4327479 cysteine synthase-like 4327479 Os01g0814800 3.4 4.3
 2.5
 -0.5
 -0.3



-0.4
 0.2
 -0.9
9 LOC4339498 serine/arginine repetitive matrix protein 2 4339498 3.4 4.7
 2.1








10 LOC4327103 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic 4327103 Os01g0251000 3.4 3.4
 3.4
 1.7
 1.2
 0.2
 -0.5
 1.5
 -0.3
 -0.7
 0.0
 -0.0
11 LOC4334672 uncharacterized LOC4334672 4334672 Os03g0831700 3.3 4.6
 2.1
 0.9
0.3
 0.2
-0.1
 0.9
0.6
 1.9
1.5
 -0.1
-0.5
 1.1
-0.4
 0.8
-0.2
 0.1
-0.6
 -1.3
-1.4
12 LOC4352640 metal transporter Nramp6-like 4352640 OSNPB_120581600 3.3 2.6
 4.0
 0.5
0.5
 1.5
0.6
 1.0
0.8
 1.5
0.3
 0.6
-0.9
 1.6
1.1
 1.3
0.5
 0.2
-0.8
 0.7
0.5
13 LOC4326668 mitogen-activated protein kinase 10-like 4326668 OSNPB_010629900 3.2 2.4
 4.1
 1.1
0.6
 0.9
-0.3
 0.8
0.5
 0.6
-0.3
 0.3
0.1
 1.3
-0.0
 1.7
1.4
 1.7
0.6
 1.6
1.1
14 LOC9272292 50S ribosomal protein L25 9272292 Os03g0612600 3.2 3.4
 3.1
 -0.4
 -0.7
 0.2
 0.6
 1.9
 2.1
 0.9
-0.6
 0.7
-0.1
 1.2
15 LOC4332203 translocase of chloroplast 34, chloroplastic 4332203 Os03g0240500 3.2 3.7
 2.7
 0.1
 1.8
-0.6
 1.4
1.2
 2.0
1.7
 2.1
1.4
 1.2
-1.1
 1.2
0.8
 2.1
1.9
 0.8
-1.0
16 LOC4351989 protein RETICULATA-RELATED 1, chloroplastic 4351989 Os12g0283800 3.2 2.3
 4.1
 1.0
 3.4
 1.0
0.5
 1.5
0.1
 3.5
1.2
 2.2
0.2
 0.8
0.1
 2.0
-0.3
 2.8
17 LOC4332907 stomatal closure-related actin-binding protein 1 4332907 Os03g0364500 3.1 3.2
 3.1
 1.3
0.5
 1.8
0.5
 1.5
0.6
 2.0
0.7
 1.0
0.6
 2.3
1.5
 2.4
1.5
 0.4
0.1
 2.4
-0.3
18 LOC4343592 uncharacterized LOC4343592 4343592 Os07g0560300 3.1 2.4
 3.8
 -0.0
 1.5
 1.8
0.2
 0.6
0.3
 -0.6
 -1.4
 -0.3
-1.5
 0.5
0.4
 -0.9
19 LOC4331393 RNA-binding protein pno1 4331393 Os03g0115200 3.1 4.9
 1.3
 3.4
0.1
 2.8
 1.3
0.7
 1.5
1.1
 1.1
 1.5
 1.9
1.2
 2.1
1.9
 4.3
20 LOC4332389 protein TOC75, chloroplastic-like 4332389 OSNPB_030271200 3.1 4.4
 1.8
 -0.1
-0.7
 1.1
 1.7
1.6
 1.6
0.6
 2.6
 0.1
 0.1
-0.5
 0.7
0.7
 -0.2
-1.2
21 LOC4347299 polyadenylate-binding protein RBP47 4347299 Os09g0462700 3.1 2.3
 3.9
 1.2
-0.3
 2.6
2.5
 1.1
0.7
 2.3
2.2
 2.7
2.0
 2.9
1.0
 -0.0
-0.4
 1.1
-0.1
 2.3
-0.5
22 LOC4332489 uncharacterized LOC4332489 4332489 Os03g0288400 3.1 3.0
 3.2
 0.7
 0.5
 -0.0
-0.3
 1.1
-0.1
 0.6
 0.9
 2.0
 2.3
 0.3
23 LOC4334351 DNA-binding protein HEXBP 4334351 Os03g0786500 3.0 2.4
 3.6
 0.5
 1.7
0.4
 1.4
0.5
 0.9
-0.4
 -0.2
 -0.8
 0.1
-0.4
 -0.3
-0.6
 1.9
-0.5
24 LOC4349386 U-box domain-containing protein 35 4349386 Os10g0561500 3.0 3.5
 2.6
 1.2
-0.2







25 LOC9271433 GDSL esterase/lipase LIP-4 9271433 Os01g0330100 3.0 4.2
 1.9
 0.1
 -0.5
-1.3
 0.4
0.1
 0.6
-0.9
 -1.2
 0.3
 -0.0
-0.8
 0.3
-0.2
 -2.1
26 LOC4337834 translocase of chloroplast 159, chloroplastic 4337834 Os05g0151400 3.0 4.2
 1.8
 1.2
 2.3
 1.2
1.2
 1.6
0.7
 1.7
0.7
 -0.1
-0.5
 0.9
0.4
 1.1
0.8
 1.1
27 LOC9268740 uncharacterized LOC9268740 9268740 2.9 3.6
 2.3








28 LOC4328118 glutamate--tRNA ligase, chloroplastic/mitochondrial 4328118 Os02g0121000 2.9 3.8
 2.0
 0.3
 1.3
 0.8
0.7
 -0.2
-0.9
 3.1
 0.8
 0.6
 1.7
 -0.9
29 LOC4334205 QWRF motif-containing protein 2 4334205 Os03g0762900 2.9 3.1
 2.7
 0.6







30 LOC4329575 F-box/FBD/LRR-repeat protein At1g13570 4329575 Os02g0537200 2.9 3.4
 2.4
 2.0
 -0.9
 0.9
0.7
 0.8
-0.1
 0.8
0.7
 0.8
0.6
 1.6
0.6
 -0.0
-0.1
 2.2
0.9
31 LOC4350686 glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial-like 4350686 OSNPB_110544800 2.9 3.8
 1.9
 -0.6
 -0.6
 0.2
0.1
 0.0
-0.0
 -0.9
 -1.0
 0.4
 1.2
 -1.5
32 LOC4345438 phosphoglucan phosphatase LSF1, chloroplastic 4345438 Os08g0379300 2.8 2.9
 2.8
 1.2
 -0.0
 -0.0
-0.3
 -1.0
-2.0
 -1.1
 -1.5
 -0.6
 0.2
 0.3
33 LOC4346041 EEF1A lysine methyltransferase 4 4346041 Os08g0517600 2.8 3.1
 2.6
 1.4
 -1.6
 0.3
0.1
 1.2
-0.2

0.0
 -0.5
 2.2
34 LOC107276615 uncharacterized LOC107276615 107276615 Os10g0575900 2.8 3.7
0.2







35 LOC4324476 tyrosine--tRNA ligase, chloroplastic/mitochondrial 4324476 Os01g0500900 2.8 2.4
 3.3
 -0.8
 0.6
 0.9
0.5
 0.3
0.0
 0.2
 -0.4
 -0.3
 -0.2
 -0.6
-0.8
36 LOC4341957 macrophage migration inhibitory factor homolog 4341957 Os06g0699500 2.8 2.9
 2.7
 0.1
 0.2
 -1.3
 -0.5
 -1.5
 -0.5
 -0.0
 0.3
 0.8
-0.4
37 LOC4344032 uncharacterized LOC4344032 4344032 Os07g0636400 2.8 2.9
 2.7
 1.8
 -0.2
 -0.0
 0.7
 1.3
 1.2
 0.4
 0.9
 -0.8
38 LOC4326656 CTP synthase 4326656 Os01g0616900 2.8 3.2
 2.3
 0.6
0.4
 1.6
1.2
 1.7
1.5
 5.1
4.2
 3.4
2.1
 2.2
0.6
 1.5
0.9
 2.0
1.2
 2.4
1.4
39 LOC4339907 uncharacterized LOC4339907 4339907 Os06g0113600 2.8 2.8
 2.7
 2.2
1.1







40 LOC4328005 trihelix transcription factor GTL1 4328005 Os02g0104500 2.8 2.8
 2.7
 -0.1
 1.9
 1.9
1.9
 1.9
1.0
 5.3
 1.7
 1.6
-0.5
 -0.4
-0.5
 3.6
41 LOC4340271 pentatricopeptide repeat-containing protein At5g48730, chloroplastic 4340271 Os06g0172000 2.8 1.9
 3.6
 1.1
 0.7
 1.1
 1.7
 3.3
 1.5
 0.2
 1.5
 0.9
42 LOC4344001 29 kDa ribonucleoprotein A, chloroplastic 4344001 Os07g0631900 2.7 2.8
 2.7
 -0.6
-1.8
 1.7
0.9
 -0.2
-0.5
 1.0
-0.4
 0.8
0.2
 1.4
1.3
 -0.0
-0.2
 1.0
0.6
 0.0
43 LOC9270659 tyrosine-protein phosphatase DSP3 9270659 Os12g0420300 2.7 3.1
 2.4
 -0.7
 1.2
0.2
 1.4
0.9
 2.8
2.2
 -0.0
-0.5
 1.0
-0.3
 0.5
 0.6
 -0.1
44 LOC4337997 uncharacterized LOC4337997 4337997 Os05g0182900 2.7 2.8
 2.7
 0.9







45 LOC107279543 uncharacterized LOC107279543 107279543 2.7 3.5









46 LOC4326744 U11/U12 small nuclear ribonucleoprotein 59 kDa protein 4326744 Os01g0226500 2.7 2.4
 3.1
 2.9
 0.9
 1.2
 1.2
 0.8
 1.5
 -0.7
 -0.5
 0.7
47 LOC4344969 chloroplast envelope membrane protein 4344969 Os08g0224300 2.7 3.7
 1.7
 0.3
 -0.2
 -0.5
-0.6
 -1.7
-2.6
 0.3
 0.2
 0.1
-0.5
 -0.3
-0.6
 -1.0
48 LOC4330719 uncharacterized LOC4330719 4330719 Os02g0745800 2.7 2.8
 2.6
 -0.5
 -0.4
 -0.2
-0.9
 -1.3
-1.9
 -1.4
 -0.8
 -1.3
 0.6
 -0.9
49 CPK23 calcium-dependent protein kinase 23-like 4349249 OSNPB_100539600 2.7 3.0
 2.3
 1.0
-0.3







50 LOC4329321 gamma-glutamylcyclotransferase 2-2 4329321 Os02g0465900 2.7 3.2
 2.1
 3.1
 1.5
0.5
 0.7
-0.4
 0.4
-0.9
 2.0
-0.3
 0.5
0.3
 0.3
-0.6
 1.0
-1.0
 3.9
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