Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4342804   pentatricopeptide repeat-containing protein At4g21065 
 osa-r.5   4342804   pentatricopeptide repeat-containing protein At4g21065 
 osa-m.8   4342804   pentatricopeptide repeat-containing protein At4g21065 
 gma-u.4   102659979   putative pentatricopeptide repeat-containing protein At3g23330 
 gma-u.4   102664309   putative pentatricopeptide repeat-containing protein At3g23330 
 sly-u.4   101246899   putative pentatricopeptide repeat-containing protein At3g23330 

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Top 50 coexpressed genes to 4342804 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa240   Pyrimidine metabolism  1 63 -
 osa1232   Nucleotide metabolism  2 80 -
 osa3008   Ribosome biogenesis in eukaryotes  1 90 -
 osa230   Purine metabolism  2 91 -
 osa480   Glutathione metabolism  1 114 -

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osa:LOC4342804 (pentatricopeptide repeat-containing protein At4g21065) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4342804
osa-r.5
for
4342804
osa-m.8
for
4342804
gma-u.4
for
102659979
gma-u.4
for
102664309
sly-u.4
for
101246899
1 LOC4328419 pentatricopeptide repeat-containing protein At4g20770 4328419 Os02g0167200 5.1 3.4
 6.8
 5.2
 5.1
 4.9
2 LOC4332013 putative pentatricopeptide repeat-containing protein At1g02420 4332013 Os03g0208600 4.9 4.0
 5.9
 4.5
 5.0
 0.5
3 LOC4339896 pentatricopeptide repeat-containing protein At1g11290, chloroplastic 4339896 Os06g0112000 4.9 2.9
 6.8
 5.1
1.8
 5.5
4.3
 3.0
4 LOC4344262 pentatricopeptide repeat-containing protein At3g18020 4344262 Os07g0674300 4.9 2.8
 6.9
 6.5
 4.6
 2.9
5 LOC4351584 pentatricopeptide repeat-containing protein At4g15720 4351584 Os12g0163600 4.7 3.0
 6.4


6 LOC4339672 pentatricopeptide repeat-containing protein At5g39680 4339672 Os05g0572900 4.6 4.0
 5.2
 5.6
 4.6
 2.5
7 LOC4340258 ribonucleoside-diphosphate reductase large subunit 4340258 Os06g0168600 4.6 4.0
 5.2
 2.2
0.6
 1.6
0.1
 0.4
-0.2
8 LOC4349672 non-structural maintenance of chromosomes element 1 homolog 4349672 Os11g0130300 4.6 2.5
 6.7
 -0.4
 -0.1
 0.6
9 LOC4328111 methyltransferase-like protein 23 4328111 Os02g0120300 4.6 1.9
 7.3
 1.1
 1.5
 -0.2
10 LOC4338264 putative pentatricopeptide repeat-containing protein At1g10330 4338264 Os05g0271900 4.4 1.8
 6.9
 4.2
 3.7
 0.7
11 LOC4344477 protein Rf1, mitochondrial 4344477 Os08g0110200 4.4 3.1
 5.6


12 LOC4350046 F-box protein At4g22280 4350046 Os11g0209200 4.3 3.5
 5.2


13 LOC4333891 zinc finger protein VAR3, chloroplastic 4333891 Os03g0712200 4.3 2.8
 5.7
 3.0
 2.1
 -0.2
14 LOC4351121 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4351121 Os11g0680200 4.3 3.5
 5.0
 7.1
 4.6
 2.7
15 LOC4337840 pentatricopeptide repeat-containing protein At2g13600 4337840 Os05g0153400 4.2 3.3
 5.2


16 LOC4351284 putative pentatricopeptide repeat-containing protein At3g08820 4351284 Os12g0109300 4.2 2.0
 6.4
 7.0
 6.1
 3.1
17 LOC4327795 F-box only protein 7 4327795 Os01g0530500 4.2 2.9
 5.5


18 LOC4348029 uncharacterized LOC4348029 4348029 Os10g0128800 4.1 2.8
 5.4


19 LOC4328019 putative pentatricopeptide repeat-containing protein At1g68930 4328019 Os02g0106300 4.1 5.4
 2.8
 5.3
 4.4
 4.3
20 LOC4348020 MEIOTIC F-BOX protein MOF-like 4348020 Os10g0126700 4.0 4.0
 3.9


21 LOC4345420 putative pentatricopeptide repeat-containing protein At3g25970 4345420 Os08g0375800 3.9 2.4
 5.5
 4.9
 4.5
 3.8
22 LOC4328201 pentatricopeptide repeat-containing protein At2g17140 4328201 Os02g0132100 3.9 5.7
4.4
 4.5
 0.9
23 LOC4333040 pentatricopeptide repeat-containing protein At4g33990 4333040 Os03g0396200 3.9 1.4
 6.4
 4.9
 3.6
 1.7
24 LOC4344353 pentatricopeptide repeat-containing protein At1g13040, mitochondrial 4344353 Os07g0688100 3.9 3.4
 4.5
 4.5
 4.9
 3.4
25 LOC4338983 pentatricopeptide repeat-containing protein At2g27610 4338983 Os05g0455900 3.9 3.9
 3.9
 3.6
 3.6
 4.0
26 LOC4327956 pentatricopeptide repeat-containing protein At1g33350 4327956 Os01g0800400 3.8 2.5
 5.2


27 LOC4345851 pentatricopeptide repeat-containing protein At1g09410, mitochondrial 4345851 Os08g0481000 3.8 5.2
3.9
 3.6
 2.2
28 LOC4334929 pentatricopeptide repeat-containing protein At3g29230 4334929 Os04g0110500 3.7 1.8
 5.7


29 LOC107277967 putative pentatricopeptide repeat-containing protein At5g09950 107277967 Os01g0589900 3.7 5.4
6.3
 5.2
 3.7
30 LOC4348797 midasin 4348797 Os10g0456950 3.7 5.4
 2.0
 3.8
3.4
 2.1
2.0
 2.6
31 LOC4334193 pentatricopeptide repeat-containing protein At1g77360, mitochondrial 4334193 Os03g0761300 3.7 2.6
 4.8
 1.7
 1.3
 0.9
32 LOC4346770 L-type lectin-domain containing receptor kinase IX.1 4346770 Os09g0334800 3.6 2.8
 4.5


33 LOC4333330 pentatricopeptide repeat-containing protein At3g24000, mitochondrial 4333330 Os03g0582100 3.6 2.2
 5.0


34 LOC4350437 short integuments 2, mitochondrial 4350437 Os11g0447300 3.6 3.0
 4.2
 0.8
0.3
 0.0
-0.2
 0.8
-0.0
35 LOC4345942 pentatricopeptide repeat-containing protein At1g80150, mitochondrial 4345942 Os08g0499800 3.6 3.0
 4.2
 5.0
4.9
 4.4
3.6
 3.9
3.3
36 LOC4346006 putative pentatricopeptide repeat-containing protein At3g05240 4346006 Os08g0511000 3.6 3.4
 3.8


37 LOC4344519 exosome complex component RRP41-like 4344519 Os08g0116800 3.6 1.8
 5.3
 1.6
0.3
 1.5
1.5
 1.8
38 LOC4324816 pentatricopeptide repeat-containing protein At3g09060 4324816 Os01g0852900 3.5 4.1
 2.9
 3.8
 2.9
 3.7
39 LOC4350793 pentatricopeptide repeat-containing protein At4g14850 4350793 Os11g0583300 3.5 1.7
 5.4
 4.2
 4.0
 4.4
40 LOC4324323 glycine-rich RNA-binding protein 4, mitochondrial 4324323 Os01g0913400 3.5 5.1
0.7
 0.5
 1.5
41 LOC4345281 GMP synthase [glutamine-hydrolyzing] 4345281 Os08g0326600 3.5 3.2
 3.8
 3.8
3.5
 2.7
2.4
 1.9
42 LOC4326378 regulator of telomere elongation helicase 1 homolog 4326378 OSNPB_010592900 3.5 3.2
 3.8
 1.4
 1.0
 1.3
43 LOC4334286 pentatricopeptide repeat-containing protein At2g22070 4334286 Os03g0775400 3.5 2.0
 5.0
 5.5
 4.4
 4.3
44 LOC107275716 pentatricopeptide repeat-containing protein At5g41170, mitochondrial 107275716 Os12g0615600 3.5 5.0
1.4
1.3
 1.8
1.0
 0.3
45 LOC4331982 uncharacterized LOC4331982 4331982 Os03g0203100 3.5 4.2
 2.7
 4.2
3.5
 3.1
2.8
 4.3
46 LOC9268688 uncharacterized LOC9268688 9268688 Os10g0203600 3.4 3.4
 3.4


47 LOC4325580 pentatricopeptide repeat-containing protein At1g08070, chloroplastic 4325580 Os01g0715900 3.4 2.2
 4.6


48 LOC4327598 putative pentatricopeptide repeat-containing protein At5g40405 4327598 Os01g0814300 3.4 3.1
 3.7

2.6
49 LOC4350640 uncharacterized LOC4350640 4350640 Os11g0532000 3.4 2.8
 3.9


50 LOC4348019 putative FBD-associated F-box protein At1g78730 4348019 Os10g0126600 3.4 2.6
 4.1


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