Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4342960   UPF0235 protein At5g63440 
 osa-r.5   4342960   UPF0235 protein At5g63440 
 osa-m.8   4342960   UPF0235 protein At5g63440 
 ath-u.4   AT5G63440   hypothetical protein (DUF167) 
 gma-u.4   100306581   PWWP-DOMAIN INTERACTOR OF POLYCOMBS1-like 
 sly-u.4   101262801   UPF0235 protein At5g63440 
 ppo-u.4   7484469   UPF0235 protein At5g63440 
 ppo-u.4   7463120   UPF0235 protein At5g63440 
 mtr-u.4   112417490   UPF0235 protein At5g63440 

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Top 50 coexpressed genes to 4342960 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4136   Autophagy - other  3 41 4.05
 osa3013   Nucleocytoplasmic transport  2 109 -
 osa480   Glutathione metabolism  1 114 -
 osa3015   mRNA surveillance pathway  2 115 -
 osa4120   Ubiquitin mediated proteolysis  2 149 -

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osa:LOC4342960 (UPF0235 protein At5g63440) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4342960
osa-r.5
for
4342960
osa-m.8
for
4342960
ath-u.4
for
AT5G63440
gma-u.4
for
100306581
sly-u.4
for
101262801
ppo-u.4
for
7484469
ppo-u.4
for
7463120
mtr-u.4
for
112417490
1 LOC4327935 IST1 homolog 4327935 Os01g0687700 4.1 4.3
 4.0
 1.5
 2.7
2.5
 -1.2
 -0.3
 0.0
 0.1
2 LOC4328506 ubiquitin carboxyl-terminal hydrolase 2 4328506 Os02g0180100 4.1 3.6
 4.6
 5.4
1.9
 2.8
2.1
 0.4
 -0.3
-1.4
 2.3
0.7
 0.2
3 LOC4339816 uncharacterized LOC4339816 4339816 Os05g0595500 4.1 4.3
 3.9
2.8
0.9
 1.2
0.3
 3.6
1.3
 0.4
-1.5
 1.9
4 LOC9266519 uncharacterized LOC9266519 9266519 Os03g0667700 4.0 3.5
 4.4
 1.5
 1.4
0.7
 -0.8
 0.5
-0.7
 1.5
1.2
 0.6
5 LOC4338349 protein phosphatase inhibitor 2 4338349 Os05g0301600 4.0 3.5
 4.4
 3.7
 0.8
0.7
 3.3
-2.0
 2.9
1.1
 3.4
0.9
 -0.2
-0.8
6 LOC4346201 la-related protein 6B 4346201 Os08g0542900 3.9 3.3
 4.5





7 LOC4343169 E3 ubiquitin-protein ligase At1g12760 4343169 Os07g0463400 3.9 4.4
 3.4
 1.1
0.5
 1.2
0.4
 1.5
-0.3
 1.1
0.8
 2.8
0.2
 1.1
1.1
8 LOC9267091 tRNA 2'-phosphotransferase 1 9267091 Os06g0134050 3.9 3.3
 4.4
 -0.0
 0.1
 0.6
 1.4
0.0
 1.1
-0.4
 0.7
-0.0
9 LOC4328092 autophagy protein 5-like 4328092 OSNPB_020117800 3.8 3.8
 3.9
 -1.1
 0.0
-0.6
 2.0
 -0.0
 0.3
 0.7
10 LOC4329131 OPA3-like protein 4329131 Os02g0312500 3.8 2.4
 5.3
 1.3
 0.9
 0.8
-0.2
 0.7
 0.3
 1.5
-2.2
11 LOC4352214 protein S-acyltransferase 10 4352214 Os12g0480000 3.8 5.0
 2.5
 -0.5
 2.8
 1.4
0.5
 1.4
1.1
 -0.4
-0.8
 1.0
12 LOC4337211 BRCA1-associated protein 4337211 Os04g0648500 3.8 5.0
 2.5
 0.7
-1.3
 1.8
1.0
 0.7
0.1
 2.5
2.0
 0.9
-0.1
 2.2
1.4
13 LOC4332765 reticulon-like protein B16 4332765 Os03g0336600 3.7 3.1
 4.3
 0.1
 0.2
-0.5
 1.5
 1.5
 1.8
 -0.1
14 LOC4332904 probable protein S-acyltransferase 17 4332904 Os03g0363900 3.7 4.1
 3.3
 2.1
 2.3
0.8
 1.1
 -0.0
 0.6
 1.7
15 LOC4328177 ADP-ribosylation factor 4328177 Os02g0128600 3.6 2.6
 4.6
 1.2
1.1
 1.8
0.8
 0.8
0.0
 1.6
0.1
 2.5
2.2
 0.4
0.3
16 LOC4324035 chaperone protein dnaJ 15 4324035 Os01g0512100 3.6 3.8
 3.3
 0.1
 -0.7
 1.1
-0.8
 1.4
0.9
 1.1
0.5
 0.2
17 LOC4339403 ER lumen protein-retaining receptor A 4339403 Os05g0529300 3.6 4.3
 2.9
 0.5
 1.0
-0.4
 0.2
 0.4
 -1.4
 0.3
18 LOC4345621 THO complex subunit 4D 4345621 Os08g0427900 3.5 3.2
 3.8
 0.8
-0.1
 1.9
1.8
 3.5
0.6
 2.9
2.6
 0.5
-0.1
 0.7
19 LOC4340429 ubiquitin-like protein ATG12 4340429 OSNPB_060205000 3.5 2.1
 4.9
 1.2
0.6
 2.1
 1.5
 1.5
0.6
 0.7
0.0
 1.1
20 LOC4346310 multiple myeloma tumor-associated protein 2 homolog 4346310 Os08g0558700 3.4 3.4
 3.5
 1.6
 -0.4
-0.9
 -0.0
 2.9
2.0
 3.0
0.9
 -0.5
21 LOC4352293 protein cornichon homolog 4 4352293 Os12g0506400 3.4 3.7
 3.2
 2.4
 1.6
0.5
 -0.0
 -0.4
 0.2
 0.5
-1.5
22 LOC4332154 protein SHORT HYPOCOTYL IN WHITE LIGHT 1 4332154 Os03g0231900 3.4 3.1
 3.7
 0.1
0.0
 5.3
3.4
 1.6
-0.4
 1.4
0.9
 2.0
-0.3
 -0.2
23 LOC4352156 autophagy-related protein 101 4352156 Os12g0446700 3.4 3.4
 3.4
 0.8
 1.3
 2.8
2.0
 0.8
 1.2
 0.5
24 LOC4337290 mediator of RNA polymerase II transcription subunit 7a 4337290 Os04g0661800 3.4 3.0
 3.8
 1.1
0.0
 2.8
0.5
 0.2
 2.2
 0.4
 1.5
0.8
25 LOC4324475 vacuolar protein sorting-associated protein 55 homolog 4324475 Os01g0966500 3.4 3.6
 3.1
 0.3
 2.5
1.8
 0.7
 1.9
 0.9
 0.3
26 LOC4328674 26S proteasome regulatory subunit 8 homolog A 4328674 Os02g0205300 3.4 3.5
 3.2
 2.2
1.0
 0.8
0.3
 -1.1
-1.5
 -0.1
-0.9
 2.7
2.1
 0.9
27 LOC4327005 glucosidase 2 subunit beta-like 4327005 Os01g0752400 3.3 3.2
 3.5
 1.1
 2.4
0.6
 0.1
 -0.0
-1.8
 -0.5
-0.8
 1.5
28 LOC4324102 uncharacterized LOC4324102 4324102 Os01g0604700 3.3 4.5
 2.2
 1.8
 1.2
-0.5
 0.9
 1.0
-0.6
 2.3
-0.8
 2.3
29 LOC4325826 RNA-binding protein Musashi homolog 2 4325826 Os01g0945800 3.3 3.0
 3.6
 4.8
 2.3
1.2
 1.4
 2.4
1.1
 3.3
2.6
 1.0
0.2
30 LOC4338483 sorting nexin 2A 4338483 Os05g0346100 3.3 3.8
 2.8
 2.8
1.4
 1.8
0.7
 1.7
-1.0
 -0.5
-0.7
 -0.3
-1.1
 0.4
0.2
31 LOC4339705 peroxisomal membrane protein PEX14 4339705 Os05g0578000 3.3 4.1
 2.5





32 LOC4340957 signal recognition particle 19 kDa protein-like 4340957 OSNPB_060342100 3.3 2.8
 3.8
 0.7
 0.1
-0.3
 -0.5
 3.1
2.0
 1.7
0.6
 0.0
33 LOC4346871 SNF1-related protein kinase regulatory subunit beta-3 4346871 Os09g0364900 3.3 2.3
 4.2
 2.5
 0.5
-1.0
 0.3
 0.2
0.1
 1.7
0.7
 1.0
34 LOC4330214 uncharacterized LOC4330214 4330214 Os02g0658900 3.3 2.8
 3.8
 0.0
 2.7
1.3
 1.1
 2.4
 1.3
 1.8
35 LOC4344773 AP2-like ethylene-responsive transcription factor AIL1 4344773 Os08g0171216 3.3 2.2
 4.3





36 LOC4335044 ATG8-interacting protein 1 4335044 Os04g0165300 3.2 2.8
 3.7
 0.2
-1.2
 0.4
-0.4
 2.1
0.2
 1.0
-0.1
 2.3
-0.3
 1.4
37 LOC9267624 protein ENHANCED DISEASE RESISTANCE 2 9267624 Os10g0455900 3.2 3.6
 2.9
 2.8
-0.7
 -0.1
-1.5
 -0.3
 1.0
0.5
 0.2
0.0
 0.3
38 LOC4350030 extra-large guanine nucleotide-binding protein 3 4350030 Os11g0206700 3.2 3.7
 2.8
 0.4
 0.4
0.1
 2.6
0.1
 0.2
-0.4
 -0.2
-1.3
 0.6
39 LOC4336009 ubiquitin carboxyl-terminal hydrolase 4 4336009 Os04g0452400 3.2 2.9
 3.5
 0.6
-0.9
 1.1
0.3
 1.3
-0.7
 0.8
-0.1
 -0.0
-0.0
 0.7
0.3
40 LOC4342455 outer envelope protein 61 4342455 Os07g0161000 3.2 4.4
 2.0
 1.6
 -0.6
-1.8
 -0.5
 0.4
0.2
 1.4
0.3
 -0.9
41 LOC4336742 ubiquitin recognition factor in ER-associated degradation protein 1 4336742 Os04g0577000 3.2 2.2
 4.2
 2.2
2.2
 0.4
-0.4
 -0.4
 -0.3
-0.6
 3.1
2.7
 0.8
42 LOC4331989 activating signal cointegrator 1 complex subunit 2 4331989 Os03g0205000 3.2 2.0
 4.4
 -1.7
 2.2
-0.4
 1.3
 0.5
 0.6
 0.7
43 LOC4339915 protein SMG9 4339915 Os06g0114600 3.2 2.4
 4.0
4.5
4.2
 0.8
 -1.0
 1.2
 1.7
44 LOC4342025 uncharacterized zinc finger CCHC domain-containing protein At4g19190 4342025 Os06g0708900 3.2 4.1
 2.2
 -1.1
 0.7
0.7
 1.4
 2.0
 0.9
 1.4
45 LOC4350808 glutathione S-transferase T1 4350808 Os11g0588300 3.2 3.4
 2.9
 2.2
 1.9
0.1
 0.1
-0.0
 0.3
-1.2
 1.1
0.5
 1.8
1.0
46 LOC4335045 protein YIF1B 4335045 Os04g0165400 3.2 1.8
 4.5
 1.3
1.0
 2.1
2.1
 2.2
-0.1
 -0.6
-0.8
 1.7
0.3
 1.3
-0.4
47 LOC4340862 putative E3 ubiquitin-protein ligase SINA-like 9 4340862 Os06g0311300 3.2 2.4
 4.0
 3.0
0.9
 2.9
2.2
 2.0
0.4
 1.3
1.1
 -0.3
-0.3
 0.9
0.7
48 LOC4333728 probable ubiquitin-conjugating enzyme E2 18 4333728 Os03g0681400 3.1 2.3
 4.0
 1.7
0.5
 0.9
 0.5
-0.5
 1.8
0.7
 2.9
2.5
 -1.1
49 LOC4324443 YJU2 splicing factor homolog 4324443 Os01g0588700 3.1 3.4
 2.9
 4.0
 0.0
-0.1
 0.1
 1.1
0.2
 1.2
-1.2
 2.3
2.1
50 LOC4348955 pre-mRNA-splicing factor CWC25 4348955 Os10g0487900 3.1 4.0
 2.3
 0.6
 2.4
-0.2
 0.9
 1.9
0.7
 -0.0
-1.2
 2.8
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