Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4343220   DNA-directed RNA polymerase III subunit RPC8 
 osa-r.5   4343220   DNA-directed RNA polymerase III subunit RPC8 
 osa-m.8   4343220   DNA-directed RNA polymerase III subunit RPC8 
 ath-u.4   AT1G06790   RNA polymerase Rpb7 N-terminal domain-containing protein 
 gma-u.4   100800770   DNA-directed RNA polymerase III subunit RPC8-like 
 gma-u.4   100808954   DNA-directed RNA polymerase III subunit RPC8 
 sly-u.4   101258274   DNA-directed RNA polymerase III subunit RPC8 
 ppo-u.4   7471998   DNA-directed RNA polymerase III subunit RPC8 
 mtr-u.4   11417037   DNA-directed RNA polymerase III subunit RPC8 

close


Top 50 coexpressed genes to 4343220 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa900   Terpenoid backbone biosynthesis  3 52 3.74
 osa3030   DNA replication  2 40 2.49
 osa1232   Nucleotide metabolism  2 80 -
 osa3018   RNA degradation  2 112 -
 osa3040   Spliceosome  2 196 -

close


osa:LOC4343220 (DNA-directed RNA polymerase III subunit RPC8) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4343220
osa-r.5
for
4343220
osa-m.8
for
4343220
ath-u.4
for
AT1G06790
gma-u.4
for
100800770
gma-u.4
for
100808954
sly-u.4
for
101258274
ppo-u.4
for
7471998
mtr-u.4
for
11417037
1 LOC4336738 uncharacterized LOC4336738 4336738 Os04g0576500 4.6 4.1
 5.2





2 LOC4326261 DNA gyrase subunit B, chloroplastic/mitochondrial-like 4326261 OSNPB_010268300 4.1 5.8
 2.5
 1.2
0.9
 0.1
0.1
 0.3
0.2
 1.8
 0.9
 1.4
3 LOC4324427 protein Mpv17 4324427 Os01g0730800 4.1 4.4
 3.7
 0.3
 0.3
 0.6
 -0.8
 -0.1
 1.4
4 LOC4325906 protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic 4325906 Os01g0673800 4.0 3.7
 4.3
 -0.2
 -0.2
 0.6
 0.7
-0.3
 1.1
 -0.4
5 LOC4346040 uncharacterized LOC4346040 4346040 Os08g0517500 4.0 4.6
 3.3
 1.8
0.0
 1.0
 1.3
 2.8
 0.7
0.7
 0.5
6 LOC4337137 double-strand break repair protein MRE11-like 4337137 OSNPB_040635900 3.9 4.2
 3.6
 3.0
 0.3
 2.0
 2.8
 1.2
 1.6
7 LOC4335983 mitochondrial phosphate carrier protein 3, mitochondrial 4335983 Os04g0448800 3.9 3.0
 4.8
 0.5
-0.4
 0.1
-1.0
 -0.1
-0.3
 1.3
-0.9
 0.5
-0.8
 0.7
0.4
8 LOC9269015 uncharacterized LOC9269015 9269015 Os09g0448900 3.9 3.6
 4.1
 0.5
 0.7
 0.0
 1.0
 -0.6
 0.4
9 LOC4338320 U3 small nucleolar RNA-associated protein 25 4338320 Os05g0295100 3.8 4.6
 3.1
 3.5
 2.0
1.7
 4.0
3.8
 0.7
 1.8
 2.5
0.8
10 LOC4332256 chloride conductance regulatory protein ICln 4332256 Os03g0249300 3.8 3.4
 4.3
 2.4
 0.6
-0.3
 1.5
0.5
 3.4
 1.1
0.4
 4.8
11 LOC4332642 adenylosuccinate lyase 4332642 Os03g0313600 3.8 4.5
 3.1
 2.9
-0.3
 -0.8
-1.3
 0.2
-0.3
 1.8
 2.3
 1.0
12 LOC4334713 uncharacterized LOC4334713 4334713 Os03g0837800 3.8 3.3
 4.3
 -0.1




13 LOC4324609 ABC transporter I family member 10 4324609 Os01g0770500 3.7 2.0
 5.4
 0.4
 0.3
 -0.7
 0.6
 0.3
 1.3
14 LOC4337150 DNA polymerase I A, chloroplastic-like 4337150 Os04g0637400 3.7 4.1
 3.4
 1.6
1.3
 0.7
-0.2
 1.0
0.2
 1.7
 0.7
0.5
 0.8
0.7
15 LOC4332367 mitochondrial substrate carrier family protein B 4332367 Os03g0267700 3.7 4.0
 3.3
 2.4
2.2
 2.8
2.4
 2.5
2.0
 1.9
 2.2
1.6
 1.2
1.0
16 LOC9268625 uncharacterized aarF domain-containing protein kinase 1 9268625 Os11g0549635 3.7 5.5
0.7

-1.1
 2.2
 1.8
17 LOC4348087 queuine tRNA-ribosyltransferase accessory subunit 2 4348087 Os10g0141900 3.6 1.8
 5.5
0.2
 -0.7
 1.7
 0.2
 1.1
18 LOC4340102 translation factor GUF1 homolog, mitochondrial-like 4340102 OSNPB_060144800 3.6 3.0
 4.2
 1.6
 0.1
 2.8
 1.8
 0.5
 1.1
19 LOC4325387 cell division protein FtsY homolog, chloroplastic 4325387 Os01g0958100 3.6 3.6
 3.5
 -1.3
 2.2
 1.3
 1.0
 0.1
 1.6
20 LOC4332686 uncharacterized LOC4332686 4332686 Os03g0322600 3.6 3.6
 3.5
 1.0
 0.6
-0.1
 1.7
0.4
 -0.0
 0.9
 0.5
21 LOC4342149 coiled-coil domain-containing protein 12 4342149 Os06g0730800 3.5 3.4
 3.6
 0.5
 0.5
0.0
 1.0
0.5
 2.8
 0.5
 0.1
22 LOC4346844 histidine protein methyltransferase 1 homolog 4346844 Os09g0359900 3.5 1.8
 5.2
 4.1
 0.9
 1.6
 1.7
 2.5
 1.6
23 LOC9269812 RNA pseudouridine synthase 7-like 9269812 OSNPB_020512300 3.5 4.1
 2.8
 1.0
 2.4
 3.5
 1.4
 1.8
 1.3
24 LOC4345430 RNA exonuclease 4 4345430 Os08g0377400 3.5 3.5
 3.4
 4.3
 4.5
3.1
 3.8
3.2
 1.0
 3.0
 2.4
25 LOC4325717 asparagine--tRNA ligase, cytoplasmic 3 4325717 Os01g0372700 3.4 2.6
 4.2
 1.7
-0.5
 0.7
0.0
 2.1
1.2
 1.8
 1.0
0.0
 1.5
0.1
26 LOC4345241 CBS domain-containing protein CBSX1, chloroplastic 4345241 Os08g0313200 3.4 3.9
 2.9
 0.3
0.1
 -0.1
-0.2
 0.2
-0.4
 0.2
-0.5
 1.2
0.7
 1.6
0.9
27 LOC4332806 serine/arginine-rich-splicing factor SR34 4332806 Os03g0344100 3.4 4.6
 2.2
 1.2
0.1
 5.1
2.1
 4.9
4.0
 -0.4
 2.2
1.8
 1.2
0.7
28 LOC4326265 Holliday junction resolvase MOC1, chloroplastic 4326265 Os01g0268900 3.4 4.0
 2.8
 3.8
 1.3
-0.2
 0.3
-0.2
 1.0
 0.0
 0.5
29 LOC4332435 uncharacterized LOC4332435 4332435 Os03g0279600 3.4 1.6
 5.2
 1.1
 0.7
-0.8
 0.3
-0.1
 2.1
1.5
 1.2
 1.0
30 LOC4340042 enolase 1 4340042 Os06g0136600 3.4 2.8
 3.9
 0.2
 -0.3
-0.3
 0.6
-0.2
 0.9
-0.5
 -0.6
-1.2
 0.9
0.2
31 LOC4328624 dehydrodolichyl diphosphate synthase complex subunit NUS1 4328624 Os02g0197700 3.3 1.9
 4.7
 2.0
 2.3
1.4
 2.7
1.6
 2.6
 0.3
 2.2
32 LOC4346632 ycf20-like protein 4346632 Os09g0287500 3.3 3.0
 3.7
2.1
1.6
 1.0
0.5
 1.9
 0.3
 0.9
33 LOC4333478 uncharacterized LOC4333478 4333478 Os03g0622600 3.3 2.4
 4.2





34 LOC4341695 DNA-directed RNA polymerase 3B, chloroplastic 4341695 Os06g0652000 3.3 3.9
 2.8
 2.4
2.3
 1.3
0.3
 2.0
1.7
 0.9
0.2
 2.0
1.9
 1.4
0.0
35 LOC4344938 GTP-binding protein ERG 4344938 Os08g0207600 3.3 3.6
 3.0
 3.4
 0.1
 1.3
 1.7
 0.8
 2.2
1.1
36 LOC4334703 glycine-rich RNA-binding protein RZ1A 4334703 Os03g0836200 3.3 2.9
 3.7
1.0
0.2
 1.1
0.2
 2.2
1.1
 1.0
 1.0
0.9
37 LOC4332085 protein BOLA1, chloroplastic 4332085 Os03g0219500 3.3 2.7
 3.9
 0.2
 0.1
-0.5
 1.5
1.0
0.7
38 LOC4325930 probable mitochondrial-processing peptidase subunit beta, mitochondrial 4325930 Os01g0711100 3.3 2.7
 3.9





39 LOC9272514 solanesyl-diphosphate synthase 1, mitochondrial-like 9272514 Os08g0193100 3.3 2.4
 4.1





40 LOC4334649 DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like 4334649 OSNPB_030827700 3.3 3.6
 2.9
 1.2
 -0.7
-1.0
 -0.6
-0.9
 1.2
 0.1
-0.2
 -0.6
41 LOC4341611 protein TIC 21, chloroplastic 4341611 Os06g0638100 3.3 3.1
 3.4
 0.2
 -0.4
-1.1
 -1.1
-1.5
 0.1
 -0.3
-0.8
 -0.6
42 LOC4325801 chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like 4325801 OSNPB_010132800 3.3 4.8
 1.7
 1.9
0.7
 0.4
 -0.2
 0.7
 1.8
 1.9
0.8
43 LOC4349811 ribonuclease H2 subunit A 4349811 Os11g0153900 3.2 2.4
 4.0
 1.2
 1.3
 2.0
 2.7
 -0.6
 1.5
44 LOC4330320 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like 4330320 OSNPB_020680600 3.2 4.0
 2.4
 0.4
 -1.3
 -1.1
 0.1
 1.3
0.8
 -0.1
45 LOC4331367 uncharacterized LOC4331367 4331367 Os03g0111800 3.2 3.0
 3.3
 0.3
 0.4
 2.0
 2.5
 -0.1
 0.0
46 LOC4346127 uncharacterized LOC4346127 4346127 3.2 3.7
 2.6





47 LOC4332448 protein SIEL 4332448 Os03g0281800 3.1 2.8
 3.5
 1.6
 1.8
 0.0
 0.5
 1.3
 0.7
48 LOC4327851 putative exosome complex component rrp40 4327851 Os01g0661400 3.1 2.5
 3.8
 5.6
4.5
 1.9
1.2
 2.0
1.4
 1.8
 4.5
 2.5
49 LOC4333582 7-methylguanosine phosphate-specific 5'-nucleotidase A 4333582 Os03g0648900 3.1 3.2
 3.1
 1.9
 0.4
 0.9
 0.2
 0.2
 1.0
50 LOC4342993 protein ROOT INITIATION DEFECTIVE 3 4342993 Os07g0408100 3.1 2.2
 4.0





The preparation time of this page was 1.3 [sec].