Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4343287   putative casein kinase II subunit beta-4 
 osa-r.5   4343287   putative casein kinase II subunit beta-4 
 osa-m.8   4343287   putative casein kinase II subunit beta-4 
 osa-u.4   4349414   putative casein kinase II subunit beta-4 
 ath-u.4   CKB4   casein kinase II beta subunit 4 
 ath-u.4   CKB2   casein kinase II beta chain 2 
 ath-u.4   CKB3   casein kinase II beta chain 3 
 gma-u.4   100793573   putative casein kinase II subunit beta-4 
 gma-u.4   100789357   putative casein kinase II subunit beta 
 gma-u.4   100784315   putative casein kinase II subunit beta 
 sly-u.4   101249856   putative casein kinase II subunit beta-4 
 sly-u.4   101245655   putative casein kinase II subunit beta-4 
 sly-u.4   101257119   putative casein kinase II subunit beta-4 
 ppo-u.4   18105101   putative casein kinase II subunit beta-4 
 ppo-u.4   18096766   casein kinase II subunit beta-2 
 ppo-u.4   18096905   casein kinase II subunit beta-2 
 mtr-u.4   25493577   casein kinase II subunit beta-1 
 mtr-u.4   11430161   casein kinase II subunit beta-1 

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Top 50 coexpressed genes to 4343287 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4712   Circadian rhythm - plant  3 34 4.30
 osa3008   Ribosome biogenesis in eukaryotes  2 90 -
 osa3018   RNA degradation  2 112 -
 osa3040   Spliceosome  2 196 -
 osa4141   Protein processing in endoplasmic reticulum  2 224 -

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osa:LOC4343287 (putative casein kinase II subunit beta-4) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4343287
osa-r.5
for
4343287
osa-m.8
for
4343287
osa-u.4
for
4349414
ath-u.4
for
CKB4
ath-u.4
for
CKB2
ath-u.4
for
CKB3
gma-u.4
for
100793573
gma-u.4
for
100789357
gma-u.4
for
100784315
sly-u.4
for
101249856
sly-u.4
for
101245655
sly-u.4
for
101257119
ppo-u.4
for
18105101
ppo-u.4
for
18096766
ppo-u.4
for
18096905
mtr-u.4
for
25493577
mtr-u.4
for
11430161
1 LOC4337399 transcription factor SRM1 4337399 Os04g0676700 6.6 4.8
 8.5
 3.7
0.0
 -0.3
-0.4
 0.6
-0.4
 0.0
-1.3
 1.7
1.0
 1.5
0.9
 2.0
1.4
 0.2
-1.4
 0.5
0.3
 0.7
0.0
 0.9
0.6
 2.0
1.7
 1.4
0.8
 1.1
0.6
 0.9
-0.3
2 LOC9269993 uncharacterized LOC9269993 9269993 Os08g0494400 5.2 3.2
 7.1
 0.7













3 LOC4337863 serine/threonine-protein phosphatase 4 regulatory subunit 3 4337863 Os05g0156800 4.8 5.7
 3.8
 2.7
0.6
 0.1
 2.0
 1.4
 1.4
1.1
 0.8
0.2
 1.7
1.0
 2.5
1.4
 2.2
0.7
 3.0
2.1
 0.0
-0.4
 0.4
-0.6
 1.4
0.8
 0.9
0.5
 1.1
1.0
4 LOC4349414 putative casein kinase II subunit beta-4 4349414 Os10g0564900 4.7 6.8
 2.6
 4.7
 7.4
3.8
 4.5
4.4
 7.4
6.0
 7.8
2.8
 7.4
2.2
 7.4
2.1
 6.8
4.4
 6.8
4.7
 4.7
4.4
 3.5
1.8
 1.8
1.8
 1.8
1.4
 4.1
 4.1
5 LOC4335654 uncharacterized LOC4335654 4335654 Os04g0386500 4.6 4.5
 4.6
 1.8
0.7
 -1.1
 2.0
 -0.5
 1.2
0.3
 3.4
2.4
 2.6
2.2
 -1.7
 -0.4
 0.9
 0.9
0.5
 2.4
1.8
 1.4
-0.1
 -0.1
 0.8
6 LOC4334493 DEAD-box ATP-dependent RNA helicase 37-like 4334493 OSNPB_030805200 4.5 3.0
 6.0
 1.5
0.9
 0.1
-0.2
 0.9
0.8
 -0.1
-0.6
 0.3
0.3
 1.9
1.7
 1.9
1.5
 2.3
0.6
 2.2
2.1
 0.2
0.2
 1.8
1.7
 3.7
2.6
 2.6
1.7
 0.6
0.3
 1.9
1.4
7 LOC4352300 eukaryotic translation initiation factor 5A-2 4352300 Os12g0507200 4.4 6.3
 2.4
 4.1
1.5
 0.1
-0.2
 1.1
-0.5
 -0.1
-0.8
 8.0
4.1
 0.6
0.2
 1.0
0.1
 3.4
2.0
 3.1
1.6
 2.1
2.1
 2.0
1.2
 1.9
0.9
 2.5
1.4
 4.6
3.1
 2.9
2.8
8 LOC4332570 chaperone protein DnaJ 4332570 Os03g0300600 4.4 4.0
 4.7
 2.3
1.2
 -0.5
-0.5
 1.2
-0.1
 0.2
-0.2
 1.5
1.0
 4.7
3.6
 2.4
2.3
 0.4
0.1
 2.0
1.1
 0.1
-0.1
 1.0
0.4
 3.3
2.7
 1.4
0.6
 -0.5
 0.9
9 LOC4333169 uncharacterized LOC4333169 4333169 Os03g0428800 4.4 6.3
 2.4
 3.6
 -0.9
 -0.5
 0.7
 -0.2
 3.9
 2.6
 -2.5
 -0.6
 -1.3
 -0.8
 1.4
 -0.3
 -0.7
 -0.1
10 LOC4329067 CLP protease regulatory subunit CLPX1, mitochondrial 4329067 Os02g0293500 4.3 4.5
 4.1
 2.5
 0.9
 1.1
 -0.9
 1.2
1.0
 5.0
3.6
 2.2
2.1
 -1.3
 1.6
 -1.0
 0.8
0.2
 4.7
2.5
 0.3
-0.3
 1.6
 2.0
11 LOC4329969 F-box/LRR-repeat protein 14 4329969 Os02g0613200 4.3 5.8
 2.8
 4.4
0.2
 1.1
 0.6
 0.5
 2.5
2.2
 1.7
0.8
 2.4
2.3
 -0.1
-0.7
 -0.0
-1.7
 -0.2
-0.2
 0.7
 1.1
 0.3
 0.4
0.4
 -0.1
-0.4
12 LOC4324952 5'-3' exoribonuclease 3 4324952 Os01g0872700 4.3 4.3
 4.3
 4.5
 -1.0
-1.7
 1.8
0.7
 0.8
0.5
 -0.7
-1.2
 1.5
0.4
 2.0
0.8
 2.0
0.6
 0.8
0.2
 1.1
-0.0
 0.5
-0.5
 1.9
-1.7
 2.1
-0.8
 2.2
0.3
 1.6
-0.2
13 LOC4337256 uncharacterized LOC4337256 4337256 Os04g0655600 4.2 3.0
 5.3
 2.3
 -0.9
 1.3
 2.0
 1.1
0.4
 1.4
-2.1
 0.3
-0.9
 0.8
 2.4
 1.4
 -0.7
-1.4
 -1.2
-1.3
 0.7
-0.1
 0.8
 0.7
14 LOC4349831 two-component response regulator-like APRR3 4349831 Os11g0157600 4.2 5.0
 3.3
 3.8













15 LOC4349053 DEAD-box ATP-dependent RNA helicase 12-like 4349053 OSNPB_100503700 4.2 4.1
 4.2
 4.4
1.0
 2.4
1.5
 2.5
1.0
 0.9
0.8
 0.3
0.1
 0.5
0.1
 0.1
-0.0
 3.5
2.6
 3.9
3.3
 3.4
1.7
 2.2
2.1
 2.0
1.6
 1.3
1.3
 3.6
2.6
 2.5
2.0
16 LOC4332781 protein pleiotropic regulatory locus 1 4332781 Os03g0339100 4.2 1.8
 6.5
 2.3
 -0.4
-0.7
 -0.1
-0.6
 0.9
-1.2
 4.3
4.0
 0.1
-0.3
 0.2
-0.0
 0.1
 -0.1
 0.6
 0.9
 0.0
 1.6
 1.9
 1.6
17 LOC4335933 CLPTM1-like membrane protein cnrB 4335933 Os04g0441900 4.1 5.6
 2.6
 1.7
 1.4
0.9
 1.3
0.4
 0.6
0.6
 0.2
-0.0
 -0.4
-0.8
 -0.5
-0.7
 2.8
 3.3
 1.9
 3.0
2.6
 5.0
2.2
 2.5
1.5
 4.0
 1.9
18 LOC4338484 dehydration-responsive element-binding protein 2B-like 4338484 OSNPB_050346200 4.1 3.7
 4.5
 3.1
-0.0
 0.0
-0.8
 -0.1
-0.7
 0.5
-0.1
 2.9
1.9
 1.7
1.0
 1.5
1.5
 0.5
-0.6
 1.6
0.5
 0.0
-0.5
 0.1
-0.5
 1.6
-1.2
 -0.8
-1.4
 1.1
0.2
 1.1
-0.2
19 LOC4325641 phytochrome-associated serine/threonine-protein phosphatase 4325641 Os01g0691700 4.1 2.8
 5.4
 2.2
 2.8
2.2
 2.9
1.8
 4.0
1.7
 5.1
3.3
 0.4
0.4
 1.3
0.4
 3.8
2.7
 2.6
2.2
 4.2
2.6
 3.6
2.3
 3.6
0.8
 1.6
1.5
 2.5
 5.4
20 LOC4337480 tubby-like F-box protein 7 4337480 OSNPB_040687900 4.0 4.7
 3.4
 2.1
2.0
 0.6
0.6
 -0.5
-0.7
 1.0
0.8
 1.1
1.0
 0.5
-0.1
 1.2
0.2
 2.2
2.2
 3.0
2.7
 1.2
0.8
 1.3
0.8
 0.5
0.2
 1.1
0.4
 1.5
1.4
 5.1
1.7
21 LOC4352641 uncharacterized LOC4352641 4352641 Os12g0581700 3.9 5.3
 2.6
 3.3
0.8
 -0.1
 2.3
 2.5
 3.2
1.0
 0.3
-0.4
 -0.2
-0.9
 1.9
 1.0
 1.0
 1.4
0.2
 0.9
0.7
 1.9
1.5
 1.5
 -0.4
22 LOC4340052 peptide methionine sulfoxide reductase A5-like 4340052 OSNPB_060138100 3.9 4.7
 3.1
 4.0
 2.5
 2.3
 1.0
 1.3
0.9
 1.0
0.3
 0.3
0.3
 2.9
 1.6
 0.9
 1.4
 0.3
 0.4
 0.7
 1.1
23 LOC4338104 abscisic acid receptor PYL5-like 4338104 OSNPB_050213500 3.9 5.1
 2.7
 3.9
0.7
 1.7
0.6
 2.0
1.2
 2.7
0.7
 2.1
1.8
 2.6
2.4
 1.6
1.4
 1.2
1.0
 1.9
0.9
 2.1
0.9
 1.0
1.0
 0.9
0.6
 1.2
0.8
 1.6
1.6
 1.7
1.3
24 LOC4338469 ras-related protein Rab-21 4338469 Os05g0341600 3.9 2.3
 5.4














25 LOC4339347 probable peptidyl-tRNA hydrolase 2 4339347 Os05g0520200 3.8 4.3
 3.3
 3.2
 -0.0
 1.4
 -0.1
 2.0
-1.3
 0.2
-0.2
 0.6
-0.9
 0.1
 -0.4
 0.8
 0.0
 1.5
 -0.5
 -0.1
 -0.4
26 LOC4349923 cleavage stimulating factor 64 4349923 Os11g0176100 3.8 3.5
 4.0
 0.3
 -0.2
 2.1
 0.5
 1.0
0.3
 1.2
1.2
 0.6
0.1
 0.2
 -0.8
 -0.5
 0.3
 -0.6
 0.9
 1.9
 2.0
27 LOC4339401 protein LIKE COV 1 4339401 Os05g0529000 3.8 3.9
 3.6
 4.0
1.9
 2.1
1.3
 3.3
2.0
 4.1
3.3
 0.1
0.0
 0.4
-0.9
 0.6
0.6
 1.8
1.2
 2.0
0.1
 2.8
1.1
 2.3
2.1
 0.4
0.1
 0.8
0.4
 3.4
2.2
 3.4
1.8
28 LOC4343226 serine carboxypeptidase-like 4343226 OSNPB_070479300 3.8 5.2
 2.3
 1.7
-0.8
 1.8
0.1
 1.4
0.3
 0.0
-0.4
 1.5
-0.5
 1.1
0.7
 -0.1
-0.1
 0.3
0.2
 0.3
-0.2
 0.4
-0.5
 1.7
0.7
 2.0
1.5
 1.0
0.6
 1.3
0.7
 1.2
0.7
29 LOC4349563 macrophage migration inhibitory factor homolog 4349563 Os11g0107500 3.7 2.6
 4.9
 0.7
-0.5
 -0.0
 2.0
 -0.8
 3.1
1.8
 1.8
1.6
 1.2
0.8
 -0.0
 -0.4
 -0.1
 1.6
1.5
 0.4
0.2
 0.4
0.4
 1.5
 0.9
30 LOC4334502 5'-adenylylsulfate reductase-like 5 4334502 OSNPB_030806500 3.7 3.7
 3.8
 3.1
 2.3
1.0
 3.1
0.9
 1.3
-0.3
 0.8
0.6
 2.3
1.9
 0.7
0.4
 -0.2
 0.7
 0.8
 3.4
3.2
 2.1
0.0
 0.1
-0.3
 3.3
 2.2
31 LOC4343846 mitochondrial import inner membrane translocase subunit TIM17-2 4343846 Os07g0604500 3.7 3.4
 4.0
 3.1
 0.5
-0.1
 1.6
0.0
 4.3
-0.2
 0.3
-0.2
 2.0
-0.3
 1.5
-0.7
 4.6
1.8
 2.5
1.6
 1.8
0.0
 1.8
1.6
 0.3
0.2
 0.6
-0.3
 1.8
 3.5
32 LOC4346315 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 4346315 OSNPB_080559300 3.7 1.4
 6.0
 1.6
 1.4
 1.2
 3.0
 1.8
1.4
 -0.2
-0.3
 0.2
0.1
 -0.1
 -1.3
 -0.3
 -0.1
-0.2
 1.5
0.9
 1.1
0.6
 0.2
 0.2
33 LOC4342635 DDT domain-containing protein DDR4 4342635 Os07g0193600 3.7 2.9
 4.4
 2.5
0.4
 -0.4
 1.0
 0.7
 0.3
-0.2
 1.6
0.5
 0.2
-0.1
 1.1
 2.1
 -0.2
 0.8
0.3
 0.2
0.2
 1.6
-0.3
 2.5
 0.7
34 LOC4343534 uncharacterized LOC4343534 4343534 Os07g0548800 3.7 1.3
 6.0
 1.2
 1.9
0.6
 0.2
-0.9
 2.5
-0.1
 0.2
-0.4
 1.2
0.5
 0.8
-0.2
 -1.3
-1.4
 -0.9
-1.6
 -0.1
-1.2
 0.9
0.9
 1.6
0.2
 0.9
0.9
 1.1
0.4
 0.7
-0.4
35 LOC4327350 uncharacterized LOC4327350 4327350 Os01g0810200 3.7 4.2
 3.1
 1.7
 2.6
 4.0
 3.7
 1.3
 -1.1
 -0.4
 1.1
 1.3
 0.3
 1.9
 1.1
 0.1
 1.3
 0.2
36 LOC4325905 ubiquitin-conjugating enzyme E2 36 4325905 Os01g0673600 3.7 2.8
 4.5
 0.5
 2.4
2.3
 4.4
3.3
 2.6
1.3
 2.8
2.2
 0.8
0.4
 0.9
0.8
 1.5
0.3
 2.1
1.1
 2.0
0.7
 2.7
 1.7
 0.9
 1.9
0.8
 2.8
1.9
37 LOC4344171 F-box protein SKIP5 4344171 Os07g0659700 3.6 3.8
 3.5
 6.8
 2.0
 1.9
 4.0
 0.0
 2.2
 2.9
 1.7
 -0.2
 0.2
 -0.3
-0.5
 0.3
0.0
 1.0
0.5
 1.1
 0.2
38 LOC4324566 chaperone protein dnaJ 49 4324566 Os01g0556400 3.6 4.5
 2.7
 4.6
 2.9
 4.9
 5.2
 1.8
1.8
 0.7
-0.2
 0.1
0.0
 4.4
 5.6
 1.8
 2.0
 0.2
 2.8
 3.0
 1.7
39 LOC9271984 autophagy-related protein 13a 9271984 Os02g0644500 3.6 2.8
 4.3
 0.2
-1.5
 0.8
 0.3
 0.4
 -0.3
-0.9
 0.2
-0.2
 0.7
-0.3
 0.0
-2.7
 0.9
-1.0
 -0.2
-1.1
 -0.1
-0.9
 -0.1
-0.6
 1.4
1.4
 1.0
 1.8
40 LOC4352214 protein S-acyltransferase 10 4352214 Os12g0480000 3.6 3.6
 3.5
 2.7
2.6
 1.4
 1.1
 1.3
 1.6
 1.4
 -0.2
 2.4
-1.3
 2.2
-1.4
 2.4
-0.3
 0.8
0.6
 0.5
0.4
 0.9
0.1
 0.4
 2.6
41 LOC4341618 probable E3 ubiquitin ligase SUD1 4341618 Os06g0639100 3.6 3.9
 3.3
 3.5
 -0.4
 1.9
 0.8
 0.3
0.1
 -0.3
-0.9
 -0.2
-0.5
 1.4
 0.6
 0.2
 2.1
1.5
 0.7
-0.6
 1.1
-0.8
 -0.5
 0.0
42 LOC4330000 two-component response regulator-like PRR1 4330000 OSNPB_020618200 3.5 4.2
 2.9
 2.3
 0.4
 -0.4
 0.2
 1.4
0.5
 1.8
1.3
 1.7
1.0
 1.0
-0.1
 0.3
0.1
 0.1
-0.4
 1.7
 4.1
 -0.3
 -1.3
-1.5
 0.2
0.1
43 LOC4328133 serine/arginine-rich splicing factor RS41 4328133 Os02g0122800 3.5 5.4
 1.6
 4.8
2.6
 0.8
-0.4
 1.5
0.5
 3.6
3.4
 2.9
2.7
 1.5
0.9
 1.5
1.4
 3.5
2.2
 4.0
3.5
 2.8
1.3
 0.5
-0.2
 1.3
1.2
 1.0
1.0
 2.8
2.6
 3.4
3.0
44 LOC4334388 BTB/POZ and MATH domain-containing protein 5 4334388 Os03g0792500 3.5 2.3
 4.8
 1.0
-0.1
 1.4
1.2
 2.9
1.6
 1.7
0.7
 3.3
1.6
 1.2
0.8
 1.6
1.5
 4.1
0.1
 4.5
2.0
 1.5
0.6
 0.2
0.2
 -0.3
-0.5
 1.5
0.7
 1.8
1.5
 2.5
2.1
45 LOC4342129 DNA-binding protein MNB1B 4342129 Os06g0728000 3.5 8.0
 -1.0
 4.9













46 LOC4339296 uncharacterized LOC4339296 4339296 Os05g0512500 3.5 3.6
 3.4
 2.1
 0.2
 0.1
 1.9
 2.5
1.0
 -0.5
-0.6
 -0.0
-0.5
 0.8
 -0.2
 -0.8
 -0.2
 1.4
 1.3
 1.3
 2.1
47 LOC4333100 uncharacterized LOC4333100 4333100 Os03g0412200 3.5 4.3
 2.6
 3.1













48 LOC4326311 ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like 4326311 OSNPB_010574500 3.5 2.4
 4.6
 2.6
0.9
 -0.8
 0.1
 -0.8
 1.0
0.9
 0.2
0.0
 0.6
0.3
 1.7
1.0
 3.7
2.3
 1.0
0.0
 0.8
 0.7
 0.1
 1.2
 3.3
49 LOC4335919 uncharacterized protein C57A10.07 4335919 Os04g0438500 3.5 4.1
 2.9
 3.0
 2.1
 0.5
 0.6
 0.3
0.2
 -0.6
-1.5
 -0.3
-0.5
 2.6
 1.0
 1.0
 3.0
 -0.0
 0.5
 1.6
 2.8
50 LOC4349736 probable calcium-binding protein CML49 4349736 Os11g0140600 3.5 3.0
 4.0
 1.1
1.1
 0.8
 0.3
 -0.1
 -0.5
 -0.1
 -1.3
 3.0
-0.6
 3.4
1.4
 0.8
0.3
 -0.6
-0.6
 -0.6
-1.3
 -0.8
-1.4
 0.3
 0.7
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