Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4343652   chaperonin-like RbcX protein 2, chloroplastic 
 osa-r.5   4343652   chaperonin-like RbcX protein 2, chloroplastic 
 osa-m.8   4343652   chaperonin-like RbcX protein 2, chloroplastic 
 osa-u.4   4334513   chaperonin-like RbcX protein 2, chloroplastic 
 ath-u.4   RbcX2   Chaperonin-like RbcX protein 
 gma-u.4   100526969   RbcX domain-containing protein 
 gma-u.4   100786585   uncharacterized LOC100786585 
 gma-u.4   100526846   RbcX-like protein 
 sly-u.4   101249788   chaperonin-like RbcX protein 2, chloroplastic 
 sly-u.4   101246564   chaperonin-like RbcX protein 2, chloroplastic 
 ppo-u.4   7465149   chaperonin-like RbcX protein 2, chloroplastic 
 ppo-u.4   7467367   chaperonin-like RbcX protein 2, chloroplastic 
 mtr-u.4   11438053   chaperonin-like RbcX protein 2, chloroplastic 

close


Top 50 coexpressed genes to 4343652 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa4712   Circadian rhythm - plant  1 41 -
 osa3018   RNA degradation  1 112 -
 osa10   Glycolysis / Gluconeogenesis  1 143 -
 osa1230   Biosynthesis of amino acids  1 234 -
 osa1200   Carbon metabolism  1 273 -

close


osa:LOC4343652 (chaperonin-like RbcX protein 2, chloroplastic) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4343652
osa-r.5
for
4343652
osa-m.8
for
4343652
osa-u.4
for
4334513
ath-u.4
for
RbcX2
gma-u.4
for
100526969
gma-u.4
for
100786585
gma-u.4
for
100526846
sly-u.4
for
101249788
sly-u.4
for
101246564
ppo-u.4
for
7465149
ppo-u.4
for
7467367
mtr-u.4
for
11438053
1 LOC4326612 probable aldo-keto reductase 1 4326612 Os01g0618100 6.7 6.3
 7.1
 -0.9
-1.0
0.9
-0.8
 1.0
-0.9
 1.6
0.2
 1.4
0.9
 0.5
0.1
 -0.4
-1.0
 0.1
-0.3
 0.8
0.7
2 LOC4332686 uncharacterized LOC4332686 4332686 Os03g0322600 6.5 4.5
 8.5
 -0.5
 0.3
 -0.0
-0.6
 -0.1
-1.1
 1.3
0.8
 1.6
 2.0
 0.2
 -0.6
 -1.0
3 LOC4325906 protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic 4325906 Os01g0673800 6.0 5.2
 6.8
 -0.4
 2.8
 0.2
 -0.1
 1.0
 1.5
-1.2
 3.1
-0.1
 1.0
 0.3
 0.3
4 LOC4339778 RNA polymerase sigma factor sigC 4339778 Os05g0589200 5.8 5.4
 6.2
 -1.0
 2.6
 1.8
 1.7
 2.4
 2.3
 2.6
 1.7
 1.2
 1.2
5 LOC4341453 protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 4341453 Os06g0601000 5.8 5.1
 6.5
 -0.6
 0.4
 -0.2
-0.4
 -1.1
-1.1
 1.1
0.0
 1.8
 -0.1
 -0.3
 -0.2
 -0.2
6 LOC9268627 carboxymethylenebutenolidase homolog 9268627 Os05g0429500 5.6 5.1
 6.1
 -1.2
 0.6
 0.5
 -1.2
 1.1
 -0.2
 -0.1
 0.2
 0.9
 1.2
7 LOC4328440 pentatricopeptide repeat-containing protein At2g35130 4328440 Os02g0170000 5.5 3.7
 7.4
 -1.0
 0.8
 0.2
 -0.3
 0.9
 0.3
 0.1
 -0.4
 -0.1
 0.3
8 LOC4345863 RNA-binding protein CP33, chloroplastic 4345863 Os08g0483200 5.5 4.4
 6.7
 -1.1
 -0.8
 0.2
-0.5
 0.5
-0.3
 0.9
-0.0
 2.5
 1.2
 0.8
 -1.1
 -0.5
9 LOC4350646 ATP-dependent DNA helicase At3g02060, chloroplastic 4350646 Os11g0533100 5.5 4.9
 6.1
 -0.0
 -1.1
 1.3
0.5
 1.8
1.0
 1.1
0.9
 2.2
 2.3
 -0.3
-0.6
 0.1
-0.1
 0.7
10 PHT4;1 probable anion transporter 1, chloroplastic 4326905 OSNPB_010279700 5.3 5.1
 5.5
 0.8
0.4
 2.6
1.0
 2.4
2.1
 2.3
1.6
 3.6
2.3
 2.5
1.5
 4.0
2.1
 0.6
-0.1
 2.0
0.3
 2.2
1.6
11 LOC4342509 uncharacterized LOC4342509 4342509 Os07g0170200 5.2 4.5
 5.9
 1.2
 4.2
 2.3
2.2
 3.2
2.7
 0.1
-1.0

2.0
0.7
 2.3
0.7
 1.7
12 LOC4345779 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like 4345779 Os08g0463900 5.1 4.3
 6.0
 0.1
 2.7
 -0.5
 -1.0
 1.5
 1.5
 3.7
 1.1
 2.8
 1.2
13 LOC4327567 Ribonuclease III domain-containing protein RNC1, chloroplastic 4327567 OSNPB_010810100 5.1 3.5
 6.7
 -0.4
 0.8
 -0.2
-0.8
 -1.0
-1.1
 0.5
-0.2
 0.3
 0.5
 0.6
 -0.1
 -0.4
14 LOC4329441 uncharacterized LOC4329441 4329441 Os02g0507400 5.1 5.0
 5.2
 1.1
-0.7
 4.4
 1.6
1.5
 1.2
0.9
 0.6
-0.7
 4.0
 2.1
 0.8
0.4
 0.2
-0.4
 0.2
15 LOC4328182 protein LOW PSII ACCUMULATION 3, chloroplastic 4328182 Os02g0129300 5.0 4.4
 5.6
 -1.9
 1.7
 0.7
 -0.0
 2.1
 3.4
 3.1
 0.7
 1.7
 0.9
16 LOC4329696 CLP protease regulatory subunit CLPX1, mitochondrial 4329696 Os02g0564400 4.9 4.4
 5.3
 -0.1
 0.0
-0.7
 -0.1
-0.6
 -0.2
-1.4
 0.8
-0.4
 1.1
-1.3
 0.5
0.3
 -0.1
-1.2
 1.0
0.9
 0.0
17 LOC4346015 psbP domain-containing protein 3, chloroplastic 4346015 Os08g0512500 4.8 2.2
 7.4
 0.2
 2.5
 1.2
-1.0
 1.0
-0.8
 1.6
1.2
 1.6
 1.9
 1.3
 -0.0
 0.6
18 LOC4345375 chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like 4345375 OSNPB_080360100 4.8 4.5
 5.1
 -0.5
 -0.8
 0.4
 0.7
 0.8
 1.8
 3.1
 -1.1
-1.4
 0.7
0.4
 -0.5
19 LOC4337868 uncharacterized LOC4337868 4337868 Os05g0157300 4.7 5.5
 3.9
 -0.3
0.9
 1.0
 0.6



-0.5
20 LOC4325154 aspartic proteinase-like 4325154 Os01g0290000 4.7 4.0
 5.3
 0.3
0.2
 0.3
-0.1
 0.3
0.0
 1.2
0.6
 0.2
-0.3
 1.5
0.3
 1.6
-0.3
 0.6
0.2
 0.7
0.4
 -0.3
-1.2
21 LOC4349671 uncharacterized LOC4349671 4349671 Os11g0130200 4.7 2.8
 6.5
 -0.1
-0.1
 4.4
 3.1
 2.0
 6.0
 1.1
 0.3
 0.7
 1.2
 2.2
22 LOC4348654 pentatricopeptide repeat-containing protein At4g31850, chloroplastic 4348654 Os10g0421800 4.6 5.6
 3.7
 -0.9
 -0.3
 0.3
 0.1
 0.5
 4.3
 2.9

-0.3
23 LOC4326994 CRS2-associated factor 2, chloroplastic 4326994 OSNPB_010323300 4.6 4.4
 4.8
 -0.1
 1.8
 0.7
 0.9
 1.1
 2.9
 0.9
 0.5
 0.1
 0.4
24 LOC4347421 uncharacterized LOC4347421 4347421 Os09g0485800 4.6 4.6
 4.6
 -1.0
0.3
 -0.2
 1.5



1.3
25 LOC4325329 protein GIGANTEA-like 4325329 OSNPB_010182600 4.6 4.3
 4.8
 -1.2
 -1.0
 0.5
0.3
 1.2
0.7
 -0.0
-0.1
 0.6
0.6
 1.1
0.9
 0.3
-0.4
 0.1
-0.4
26 LOC4333169 uncharacterized LOC4333169 4333169 Os03g0428800 4.6 3.7
 5.4
 1.1
 2.7
 1.2
 1.8
 -1.0
 2.5
 1.1
 -0.3
 1.1
 1.8
27 LOC4345611 chaperonin-like RBCX protein 1, chloroplastic 4345611 Os08g0425200 4.4 3.7
 5.1
 -0.2
 0.8
 0.7
-0.4
 -0.1
-1.2
 1.1
0.7
 2.1
 2.6
 -0.4
 0.6
 -0.6
28 LOC4343532 pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic-like 4343532 OSNPB_070548300 4.4 3.5
 5.3
 -1.3
 1.4
 0.1
-0.3
 -0.2
-0.7
 0.8
0.5
 1.2
 1.3
 -0.4
-0.5
 1.4
1.2
 -0.3
29 LOC4333342 uncharacterized LOC4333342 4333342 Os03g0586500 4.4 3.3
 5.4
 0.1
 1.9
 1.5
1.0
 1.3
0.7
 2.1
1.7
 1.7
 2.4
 0.3
 0.7
 -0.2
30 LOC4337044 transcription factor GTE7 4337044 Os04g0623100 4.3 3.2
 5.5
 -0.2
-0.6








31 LOC4347659 rhodanese-like domain-containing protein 14, chloroplastic 4347659 Os09g0530000 4.3 3.4
 5.2
 -0.2
 2.6
 3.1
0.7
 3.6
0.7
 1.9
-1.7
 2.5
 2.3
 0.6
0.5
 1.3
1.0
32 LOC4330635 APO protein 2, chloroplastic 4330635 Os02g0732900 4.3 2.6
 6.0
 -0.1
 0.2
 1.0
 1.1
 1.6
 3.1
 1.6
 0.4
-0.7
 1.4
-0.0
 0.5
0.3
33 LOC4327482 zinc finger protein VAR3, chloroplastic 4327482 Os01g0815700 4.3 3.3
 5.3
 0.8
 -0.1
 -1.6
-1.8
 -1.6
-1.8
 0.0
-0.9
 0.9
 1.5
 0.2
 0.9
 0.2
34 LOC4344860 pentatricopeptide repeat-containing protein At3g59040 4344860 Os08g0191900 4.3 4.0
 4.5
 -0.7
 -1.1
 -0.5
-0.6
 -0.6
-0.7
 0.7
-0.7
 2.9
 1.7
 -0.6
 -0.0
 -1.2
35 LOC4336948 methionine aminopeptidase 1B, chloroplastic 4336948 Os04g0610500 4.2 3.7
 4.7
 0.0
-0.9
 -0.5
 -0.5
-1.0
 0.0
-0.8
 0.6
0.4
 2.0
 1.6
 0.0
 0.8
 -0.2
36 LOC4327616 RING-H2 finger protein ATL74 4327616 Os01g0822800 4.2 4.0
 4.5
 0.5
-0.5
 1.1
0.6
 0.7
0.0
 0.9
0.2
 1.8
0.7
 0.8
 -0.1
 0.6
0.0
 0.7
0.2
 -0.6
-0.8
37 LOC4330690 protein LSM12 homolog 4330690 Os02g0741900 4.2 2.6
 5.8
 -0.8
 -1.0
 0.8
0.7
 0.6
-0.0
 -0.2
-1.7
 -2.4
 0.2
 0.7
0.3
 0.4
-0.2
 0.4
38 LOC4349444 uncharacterized LOC4349444 4349444 Os10g0569000 4.2 3.9
 4.5
 0.5
 4.6
 1.5
-0.7
 1.7
-0.4
 -0.2
-0.2
 1.5
 1.5
 0.3
 1.0
 2.8
39 LOC4340042 enolase 1 4340042 Os06g0136600 4.2 3.6
 4.8
 1.1
-0.6
 -0.8
 0.1
-0.9
 0.6
-0.6
 -0.5
-0.7
 -0.7
-2.5
 -0.1
-1.8
 -0.6
-1.0
 -1.1
-3.5
 0.8
-0.9
40 LOC4349782 2-carboxy-D-arabinitol-1-phosphatase 4349782 Os11g0150100 4.2 2.6
 5.7
 0.2
 2.4
 1.1
0.6
 0.9
0.5
 4.0
3.6
 2.8
 3.0
 2.5
 1.6
 1.3
41 LOC112936032 pentatricopeptide repeat-containing protein At3g18110, chloroplastic-like 112936032 4.2 6.0
-0.6
 -1.7
 -0.1
 -0.1
 0.3
 -0.8
 0.9
 -0.5
-0.6
 0.6
-0.5
 -0.2
42 LOC4347180 oryzain gamma chain-like 4347180 OSNPB_090442300 4.1 4.2
 4.1
 -0.2
 0.8
-2.0
 -1.2
 -2.8
 -1.6
 0.8
0.2
 0.8
-0.3
 0.6
 1.3
 -0.3
-0.4
43 WSP1 white stripe leaf/panicle1 4336884 Os04g0601800 4.1 5.6
0.6
-0.9
 0.3
0.1
 -0.3
-1.6
 -0.4
-1.8
 0.3
-0.0
 -0.0
-1.5
 0.3
-1.7
 0.4
0.1
 -0.2
-0.3
 -0.1
44 LOC4344632 multiple organellar RNA editing factor 9, chloroplastic 4344632 Os08g0139100 4.1 3.9
 4.3
 -1.2
 0.4
0.3
 -0.2
-0.2
 0.1
-0.1
 -0.3
-0.4
 0.8
 0.7
 1.0
-0.3
 0.9
-0.4
 1.0
-0.8
45 LOC4327544 psbP domain-containing protein 6, chloroplastic 4327544 Os01g0805300 4.1 1.6
 6.5
 -1.2
 1.9
 0.8
0.6
 1.0
0.6
 1.7
0.8
 2.7
 0.2
 0.3
 -1.0
 -0.7
46 LOC4324867 histone deacetylase HDT2 4324867 Os01g0909500 4.1 3.4
 4.8









47 LOC4336574 nudix hydrolase 8 4336574 Os04g0547900 4.0 3.6
 4.5
 0.6
-1.1
 0.6
 1.2
-0.0
 1.6
-0.0
 0.7
0.3
 0.9
-0.1
 1.1
0.1
 -0.1
 -0.9
 1.2
48 LOC4332025 uncharacterized LOC4332025 4332025 Os03g0210700 4.0 4.1
 4.0
 1.5
1.0
0.3
 0.6
-0.3
 2.3
1.4
 2.2
 0.9
 1.8
 3.8
 2.3
49 LOC4334845 PGR5-like protein 1A, chloroplastic 4334845 Os03g0857400 4.0 3.3
 4.7
 0.0
-0.5
 3.2
2.4
 2.3
2.3
 3.4
2.6
 3.9
1.9
 3.3
1.6
 3.7
1.3
 0.4
0.3
 -0.2
-0.8
 1.6
0.2
50 LOC4337691 uncharacterized LOC4337691 4337691 Os05g0128100 4.0 3.8
 4.1
 -1.7
 0.6
 2.0
-0.2
 1.4
-0.1
 0.5
0.2

0.5
 -0.0
 -0.4
The preparation time of this page was 1.4 [sec].