Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.4   4343859   uncharacterized LOC4343859 
 osa-r.5   4343859   uncharacterized LOC4343859 
 osa-m.8   4343859   uncharacterized LOC4343859 
 gma-u.4   100795024   uncharacterized LOC100795024 
 gma-u.4   100800026   uncharacterized LOC100800026 
 sly-u.4   101263778   uncharacterized LOC101263778 
 ppo-u.4   7463700   uncharacterized LOC7463700 
 mtr-u.4   11439079   uncharacterized LOC11439079 

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Top 50 coexpressed genes to 4343859 (osa-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 osa195   Photosynthesis  9 76 13.31
 osa30   Pentose phosphate pathway  1 57 -
 osa10   Glycolysis / Gluconeogenesis  1 143 -
 osa190   Oxidative phosphorylation  2 156 -
 osa3010   Ribosome  2 353 -

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osa:LOC4343859 (uncharacterized LOC4343859) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.4
for
4343859
osa-r.5
for
4343859
osa-m.8
for
4343859
gma-u.4
for
100795024
gma-u.4
for
100800026
sly-u.4
for
101263778
ppo-u.4
for
7463700
mtr-u.4
for
11439079
1 LOC4332516 uncharacterized LOC4332516 4332516 Os03g0293100 6.5 4.9
 8.2
 3.6
2.9
 2.1
1.7
 2.0
 0.4
 3.0
2 LOC4348287 uncharacterized LOC4348287 4348287 Os10g0213700 5.3 4.6
 5.9
 4.5
 3.8
 3.3
 0.8
 1.2
3 LOC4333370 uncharacterized LOC4333370 4333370 Os03g0595300 5.2 4.7
 5.6
 0.9
0.8
 1.8
1.7
 4.4
 6.0
 2.8
4 LOC4344539 photosystem II core complex proteins psbY, chloroplastic 4344539 Os08g0119800 5.2 5.5
 4.9
 2.8
2.5
 2.7
1.4
 1.7
 5.7
5.1
 2.6
2.0
5 LOC4344752 protein CHLORORESPIRATORY REDUCTION 6, chloroplastic 4344752 Os08g0167500 5.1 4.2
 6.1
 1.1
0.7
 2.5
2.4
 3.9
 1.1
 2.5
6 LOC4338729 UPF0603 protein Os05g0401100, chloroplastic-like 4338729 OSNPB_050401100 5.1 4.7
 5.4
 2.4
1.1
 2.4
1.0
 3.2
 4.2
3.0
 3.0
7 LOC4340391 putative peroxiredoxin Q, chloroplastic 4340391 OSNPB_060196300 5.0 5.8
 4.2
 2.4
0.6
 3.7
2.8
 3.6
 1.1
-0.4
 3.6
8 LOC4339170 uncharacterized LOC4339170 4339170 Os05g0490900 4.9 4.9
 4.9
 2.3
1.8
 2.7
2.7
 2.2
 3.4
1.7
 2.0
9 LOC4331815 ylmG homolog protein 2, chloroplastic 4331815 Os03g0178200 4.8 6.2
 3.5
 5.0
4.4
 3.2
2.6
 2.2
 3.3
 5.4
10 LOC4349277 uncharacterized LOC4349277 4349277 Os10g0545100 4.8 4.1
 5.5
 1.4
0.4
 1.0
0.7
 1.8
1.0
 2.1
 1.2
11 LOC4335625 violaxanthin de-epoxidase, chloroplastic 4335625 Os04g0379700 4.8 5.4
 4.1
 2.9
2.8
 2.6
1.8
 5.1
 2.1
 2.8
12 LOC4342069 uncharacterized LOC4342069 4342069 Os06g0715200 4.8 4.1
 5.5
 2.7
2.6
 3.3
2.2
 2.7
 2.6
 4.1
13 LOC4339115 serine/threonine-protein kinase STN8, chloroplastic 4339115 Os05g0480000 4.7 4.9
 4.4
 3.1
2.5
 2.4
1.9
 3.1
 2.7
2.2
 2.8
0.8
14 LOC4336511 peroxisomal membrane protein 11-4-like 4336511 OSNPB_040534600 4.7 3.6
 5.7
 1.4
0.4
 1.8
1.3
 4.2
 2.1
0.2
 2.8
15 LOC4329953 protein TAB2 homolog, chloroplastic-like 4329953 Os02g0610800 4.6 4.1
 5.2
 3.2
3.2
 2.2
1.8
 2.2
 1.3
0.7
 4.6
2.2
16 LOC4333746 ferredoxin C 2, chloroplastic 4333746 Os03g0685000 4.6 5.3
 3.9
 2.1
0.8
 2.1
1.9
 1.7
 0.0
 4.7
17 LOC4337264 uncharacterized LOC4337264 4337264 Os04g0657900 4.6 4.0
 5.2
 2.7
 2.4
 3.8
 3.5
 0.6
18 LOC4325238 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic 4325238 Os01g0959900 4.6 5.4
 3.7
 2.7
 2.8
 3.7
 2.2
 1.8
19 LOC4330096 ferredoxin-thioredoxin reductase, variable chain 4330096 Os02g0638300 4.5 2.6
 6.4
 2.5
1.7
 3.2
3.1
 4.2
 2.2
1.0
 2.5
20 LOC4345153 photosynthetic NDH subunit of subcomplex B 1, chloroplastic 4345153 Os08g0276100 4.4 4.2
 4.7
 2.1
1.2
 2.3
1.9
 2.9
 1.9
 1.7
21 LOC9271497 uncharacterized LOC9271497 9271497 Os07g0243150 4.3 4.0
 4.6
 3.5
3.2
 1.7
1.2
 4.4
 3.2
2.5
 4.1
2.1
22 LOC4334225 uncharacterized LOC4334225 4334225 Os03g0765900 4.3 4.8
 3.8
 4.0
3.0
 3.5
3.3
 4.0
3.1
 3.8
3.4
 3.3
23 LOC4336446 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic 4336446 Os04g0525000 4.3 4.0
 4.5
 1.8
 1.3
 3.6
 1.4
 2.9
24 LOC4352264 NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 4352264 Os12g0498500 4.3 3.6
 4.9
 1.0
-0.1
 2.0
0.3
 2.8
 2.3
 3.2
25 LOC4341062 uncharacterized LOC4341062 4341062 Os06g0484500 4.2 4.6
 3.8
 1.8
1.3
 3.7
1.0
 1.7
 3.5
2.5
 2.6
26 LOC4341766 peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic 4341766 Os06g0663800 4.2 4.1
 4.3
 2.1
 3.5
 3.2
 1.9
 2.1
27 LOC4332364 fructose-1,6-bisphosphatase, chloroplastic-like 4332364 OSNPB_030267300 4.2 3.6
 4.8
 1.6
0.9
 2.4
0.7
 2.9
 3.6
2.4
 2.5
28 LOC4332745 photosystem II repair protein PSB27-H1, chloroplastic 4332745 Os03g0333400 4.2 3.0
 5.3
 2.2
1.3
 2.2
0.9
 2.1
 5.3
3.4
 1.6
29 LOC4324479 oxygen-evolving enhancer protein 1, chloroplastic 4324479 Os01g0501800 4.1 3.8
 4.5
 2.6
2.4
 2.2
1.3
 2.0
 6.2
4.8
 2.2
1.9
30 LOC4332431 ATP synthase subunit b', chloroplastic 4332431 Os03g0278900 4.1 3.0
 5.2
 3.6
 3.4
 2.7
1.9
 2.0
1.8
 2.5
31 LOC4331128 uncharacterized LOC4331128 4331128 Os02g0815300 4.1 4.1
 4.2
 2.4
1.3
 1.7
1.1
 2.1
 1.8
 3.0
32 LOC4326593 50S ribosomal protein L31 4326593 Os01g0633000 4.0 3.9
 4.2
 2.3
2.1
 3.4
2.2
 2.7
 1.1
 2.7
33 LOC4346559 uncharacterized LOC4346559 4346559 Os09g0266000 4.0 3.6
 4.4
 3.2
 2.3
 2.1
 0.0
 1.6
34 LOC4346192 peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic 4346192 Os08g0541400 4.0 4.4
 3.7
 2.1
1.2
 1.5
1.2
 3.6
 4.0
3.6
 3.7
35 LOC4351696 uncharacterized LOC4351696 4351696 Os12g0189700 4.0 3.3
 4.7
 3.2
 3.1
-0.1
 1.5
36 LOC4343366 ATP synthase subunit gamma, chloroplastic 4343366 Os07g0513000 4.0 3.1
 4.8
 3.0
1.2
 2.7
1.5
 3.3
 6.0
3.3
 3.7
37 LOC4340704 protein CURVATURE THYLAKOID 1A, chloroplastic 4340704 Os06g0264800 3.9 3.0
 4.9
 3.6
3.2
 2.2
1.4
 2.0
1.5
 2.8
2.2
 2.6
38 LOC4328558 30S ribosomal protein S21, chloroplastic 4328558 Os02g0189000 3.9 2.5
 5.3
 3.8
3.4
 2.9
2.7
 3.2
-0.9
 1.1
 4.1
39 LOC4340014 uncharacterized LOC4340014 4340014 Os06g0132300 3.9 2.6
 5.3




40 LOC4332759 pentatricopeptide repeat-containing protein At5g41170, mitochondrial 4332759 Os03g0336000 3.9 2.8
 5.0
 1.8
 2.1
 0.5
 1.0
 0.9
41 LOC4333999 uncharacterized LOC4333999 4333999 Os03g0731100 3.9 4.3
 3.4
 1.6
 3.1
 1.2
 3.5
 1.8
0.6
42 LOC4331681 photosynthetic NDH subunit of subcomplex B 2, chloroplastic 4331681 Os03g0158300 3.8 5.0
 2.6
 1.9
0.9
 2.6
2.0
 1.8
 0.5
 3.1
43 LOC4324275 50S ribosomal protein 5, chloroplastic 4324275 Os01g0278900 3.8 4.0
 3.7




44 LOC4324908 rhodanese-like domain-containing protein 4A, chloroplastic 4324908 Os01g0889800 3.8 4.8
 2.8
 3.0
3.0
 2.6
2.5
 1.7
 0.5
 2.3
45 LOC4324965 uncharacterized LOC4324965 4324965 Os01g0894700 3.8 4.0
 3.6

3.3
1.6
 -0.2
 4.9
46 LOC4342192 photosynthetic NDH subunit of lumenal location 3, chloroplastic 4342192 Os07g0105600 3.8 5.0
 2.5
 2.8
2.1
 2.1
1.3
 3.8
 1.4
 2.5
47 LOC4343570 cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like 4343570 OSNPB_070556200 3.7 4.1
 3.4
 3.1
2.2
 2.9
2.9
 3.2
 4.2
1.6
 3.4
48 LOC4326537 photosystem II reaction center PSB28 protein, chloroplastic-like 4326537 OSNPB_010938100 3.7 3.4
 4.0
 1.8
1.4
 1.0
0.5
 3.5
 2.8
 2.8
49 LOC4339230 uncharacterized LOC4339230 4339230 Os05g0500400 3.7 3.5
 3.9
 3.4
2.9
 2.5
2.3
 5.0
 3.6
 2.3
50 LOC4332348 50S ribosomal protein L4, chloroplastic 4332348 Os03g0265400 3.7 4.8
 2.5
 4.0
2.8
 2.1
1.2
 2.3
 1.6
 1.2
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